Modify trans_filter so that Saliva_hispanica is not counted

svn path=/; revision=680

diff --git a/interactome_scripts/find_species.pl b/interactome_scripts/find_species.pl
index 5a47541b0cf0c322e5bc00b81e1f3c0c3e8d7248..97d2e2eccbd270ac9c9cc15b24d734c2905e4157 100755 (executable)
--- a/interactome_scripts/find_species.pl
+++ b/interactome_scripts/find_species.pl
@@ -1517,6 +1517,13 @@ sub trans_filter {
                                if ($gene =~ /t[2-9]$/) {$is_transcript = 0;}
                                elsif ($gene =~ /t1[0-9]$/) {$is_transcript = 0;}
                }
+               
+
+               # Salvia hispanica genes should all be counted
+               if($species eq "Salvia_hispanica") {
+                       $is_transcript = 1;
+               }
+
 return $is_transcript;
 }