renamed test_PPPP/PO_ontology_IMP_gene_G.max.assoc,/PO_ontology_IMP_gene_M.truncatula...

svn path=/; revision=523

diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_G.max.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_G.max.assoc
new file mode 100644 (file)
index 0000000..91276bd
--- /dev/null
+++ b/po-associations/test_PPPP/PO_ontology_IMP_gene_G.max.assoc
@@ -0,0 +1,34 @@
+SOY_gene       Glyma01g36600   E2-1            PO:0007016       PMID: 25774204 IMP             G       Glyma01g36600   E2      gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma02g05450   Wp              PO:0009046       PMID: 25774204 IMP             A       Glyma02g05450   Wp      gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma02g05450   Wp              PO:0009088       PMID: 25774204 IMP             A       Glyma02g05450   Wp      gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma02g39230   GmFAD3-2                PO:0009010       PMID: 25774204 IMP             A       Glyma02g39230   FAD3-2  gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma03g32500   GmLPA1-1                PO:0009010       PMID: 25774204 IMP             A       Glyma03g32500   LPA1-1  gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma05g27840   Eu1-1           PO:0009009       PMID: 25774204 IMP             A       Glyma05g27840   ESU     gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma06g18890.1 RS2             PO:0009010       PMID: 25774204 IMP             A       Glyma06g18890.1 Raffinose synthase      gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma06g18890.1 RS1-2           PO:0009010       PMID: 25774204 IMP             A       Glyma06g18890.1 Raffinose synthase      gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma06g19820   AMDH2 BADH2             PO:0009010       PMID: 25774204 IMP             A       Glyma06g19820   GmAMDH2 gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma06g21920   T               PO:0000282       PMID: 25774204 IMP             A       Glyma06g21920   Tawny   gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma06g21920   T               PO:0020063       PMID: 25774204 IMP             A       Glyma06g21920   Tawny   gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma08g06630   ANR1            PO:0009088       PMID: 25774204 IMP             A       Glyma08g06630   ANR1    gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma08g08970   Eu3-1           PO:0000003       PMID: 25774204 IMP             A       Glyma08g08970   GmUreG  gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma09g36983                   PO:0020063       PMID: 25774204 IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma09g36983                   PO:0009088       PMID: 25774204 IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    taxon:3847      20150716        Ethan Johnson\r
+SOY_gene       Glyma10g42470   GmFAD2-1                PO:0009010       PMID: 25774204 IMP             A       Glyma10g42470   FAD2-1  gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma11g27480   GmAS1-A         PO:0009088       PMID: 25774204 IMP             A       Glyma11g27480   Asparagine synthase 1   gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma11g27480   GmAS1-A         PO:0009010       PMID: 25774204 IMP             A       Glyma11g27480   Asparagine synthase 1   gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma11g37250   EU4-1           PO:0000003       PMID: 25774204 IMP             A       Glyma11g37250   UU      gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma14g04380   Eu2-1           PO:0000003       PMID: 25774204 IMP             A       Glyma14g04380   GmUreF  gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma14g09510   GmASPGB1-A              PO:0009088       PMID: 25774204 IMP             A       Glyma14g09510   Asparaginase B1 gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma14g09510   GmASPGB1-A              PO:0009010       PMID: 25774204 IMP             A       Glyma14g09510   Asparaginase B1 gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma14g27990   GmFAB2-3                PO:0009010       PMID: 25774204 IMP             A       Glyma14g27990   FAB2-3  gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma14g37350   GmFAD3-1                PO:0009010       PMID: 25774204 IMP             A       Glyma14g37350   FAD3-1  gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma16g01980   GmLHY1          PO:0020100       PMID: 25774204 IMP             A       Glyma16g01980   MYB Transcription Factor        gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma16g01980   GmLHY1          PO:0007016       PMID: 25774204 IMP             G       Glyma16g01980   MYB Transcription Factor        gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma16g04830   GmFT5-A         PO:0007016       PMID: 25774204 IMP             G       Glyma16g04830   FT-5A   gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma16g26660   GmFT2-A         PO:0007016       PMID: 25774204 IMP             G       Glyma16g26660   FT-2A   gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma18g02210   MIPS1           PO:0007030       PMID: 25774204 IMP             G       Glyma18g02210   GmMIPS1 gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma18g06950   GmFAD3-3                PO:0009010       PMID: 25774204 IMP             A       Glyma18g06950   FAD3-3  gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma19g35230   GmLPA1-2                PO:0009010       PMID: 25774204 IMP             A       Glyma19g35230   LPA1-2  gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma20g24530   GmFAD2-2                PO:0009010       PMID: 25774204 IMP             A       Glyma20g24530   FAD2-2  gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma20g25000   Ln              PO:0020049       PMID: 25774204 IMP             A       Glyma20g25000   GmJagged1       gene    taxon:3847      20150717        Ethan Johnson\r
+SOY_gene       Glyma20g25000   Ln              PO:0000003       PMID: 25774204 IMP             A       Glyma20g25000   GmJagged1       gene    taxon:3847      20150717        Ethan Johnson
\ No newline at end of file

diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_M.truncatula.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_M.truncatula.assoc
new file mode 100644 (file)
index 0000000..667d042
--- /dev/null
+++ b/po-associations/test_PPPP/PO_ontology_IMP_gene_M.truncatula.assoc
@@ -0,0 +1,81 @@
+LIS    Medtr5g030920   nork            PO:0025025       PMID: 25774204 IMP             A       Medtr5g030920   nodulation receptor kinase      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g030920   nork            PO:0003023       PMID: 25774204 IMP             A       Medtr5g030920   nodulation receptor kinase      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g086130   LYK3            PO:0025025       PMID: 25774204 IMP             A       Medtr5g086130   LYSIN MOTIF RECEPTOR-LIKE KINASE 3      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g086130   LYK3            PO:0003023       PMID: 25774204 IMP             A       Medtr5g086130   LYSIN MOTIF RECEPTOR-LIKE KINASE 3      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g086120   LYK4            PO:0025025       PMID: 25774204 IMP             A       Medtr5g086120   LYSIN MOTIF RECEPTOR-LIKE KINASE 4      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g086120   LYK4            PO:0003023       PMID: 25774204 IMP             A       Medtr5g086120   LYSIN MOTIF RECEPTOR-LIKE KINASE 4      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr2g005870   DMI1            PO:0025025       PMID: 25774204 IMP             A       Medtr2g005870   doesn't make infections 1       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr2g005870   DMI1            PO:0003023       PMID: 25774204 IMP             A       Medtr2g005870   doesn't make infections 1       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g043970   DMI3            PO:0025025       PMID: 25774204 IMP             A       Medtr8g043970   doesn't make infections 3       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g043970   DMI3            PO:0003023       PMID: 25774204 IMP             A       Medtr8g043970   doesn't make infections 3       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g022030   CDPK1           PO:0000256       PMID: 25774204 IMP             A       Medtr5g022030   calcium-dependent protein kinase 1      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g022030   CDPK1           PO:0025025       PMID: 25774204 IMP             A       Medtr5g022030   calcium-dependent protein kinase 1      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g022030   CDPK1           PO:0003023       PMID: 25774204 IMP             A       Medtr5g022030   calcium-dependent protein kinase 1      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr6g071190   FCL1            PO:0020049       PMID: 25774204 IMP             A       Medtr6g071190   fused compound leaf 1   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr6g071190   FCL1            PO:0020038       PMID: 25774204 IMP             A       Medtr6g071190   fused compound leaf 1   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr6g071190   FCL1            PO:0020055       PMID: 25774204 IMP             A       Medtr6g071190   fused compound leaf 1   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g106420   FLOT2           PO:0025025       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g106420   FLOT2           PO:0003023       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g106420   FLOT2           PO:0020127       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g106420   FLOT2           PO:0020121       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g106480   FLOT3           PO:0009005       PMID: 25774204 IMP             A       Medtr3g106480   Flotillin-like protein 3        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g106430   FLOT4           PO:0025025       PMID: 25774204 IMP             A       Medtr3g106430   Flotillin-like protein 4        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g106430   FLOT4           PO:0003023       PMID: 25774204 IMP             A       Medtr3g106430   Flotillin-like protein 4        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g014400   PALM1           PO:0025034       PMID: 25774204 IMP             A       Medtr5g014400   PALMATE-LIKE PENTAFOLIATA1      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g014400   PALM1           PO:0020038       PMID: 25774204 IMP             A       Medtr5g014400   PALMATE-LIKE PENTAFOLIATA1      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g014400   PALM1           PO:0020055       PMID: 25774204 IMP             A       Medtr5g014400   PALMATE-LIKE PENTAFOLIATA1      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr4g084140   MtNAP1          PO:0025025       PMID: 25774204 IMP             A       Medtr4g084140   Nick-associated protein 1       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr4g084140   MtNAP1          PO:0003023       PMID: 25774204 IMP             A       Medtr4g084140   Nick-associated protein 1       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr4g084140   MtNAP1          PO:0000256       PMID: 25774204 IMP             A       Medtr4g084140   Nick-associated protein 1       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0020030       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0009009       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0020049       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0009046       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0025082       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0009029       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0009030       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0020003       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0025208       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0006339       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    AFI56799.1      NAM             PO:0009001       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr1g090320   LIN             PO:0003023       PMID: 25774204 IMP             A       Medtr1g090320   Lumpy infections        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr4g070970   SUNN            PO:0009005       PMID: 25774204 IMP             A       Medtr4g070970   super numeric nodules   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr4g070970   SUNN            PO:0025025       PMID: 25774204 IMP             A       Medtr4g070970   super numeric nodules   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr4g070970   SUNN            PO:0003023       PMID: 25774204 IMP             A       Medtr4g070970   super numeric nodules   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g106150   MtCre1          PO:0025025       PMID: 25774204 IMP             A       Medtr8g106150   Cytokinin Response1     gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g106150   MtCre1          PO:0020121       PMID: 25774204 IMP             A       Medtr8g106150   Cytokinin Response1     gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g106150   MtCre1          PO:0003023       PMID: 25774204 IMP             A       Medtr8g106150   Cytokinin Response1     gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr7g101410   Skl1            PO:0025025       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr7g101410   Skl1            PO:0009005       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr7g101410   Skl1            PO:0020030       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr7g101410   Skl1            PO:0000012       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr7g101410   Skl1            PO:0000263       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr7g101410   Skl1            PO:0020100       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr1g056530   HAP2.1          PO:0003023       PMID: 25774204 IMP             A       Medtr1g056530           gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g026850   CYCLOPS         PO:0025025       PMID: 25774204 IMP             A       Medtr5g026850   cyclops gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g019040   NFP             PO:0025025       PMID: 25774204 IMP             A       Medtr5g019040   Nod Factor Perception   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g019040   NFP             PO:0003023       PMID: 25774204 IMP             A       Medtr5g019040   Nod Factor Perception   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g098560   SGL1            PO:0020038       PMID: 25774204 IMP             A       Medtr3g098560   single leaflet1 gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g098560   SGL1            PO:0009046       PMID: 25774204 IMP             A       Medtr3g098560   single leaflet1 gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g011250   ANS             PO:0025034       PMID: 25774204 IMP             A       Medtr5g011250   Anthocyanidin synthase  gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr5g011250   ANS             PO:0009010       PMID: 25774204 IMP             A       Medtr5g011250   Anthocyanidin synthase  gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    CAI29046.1      MtAOC           PO:0009005       PMID: 25774204 IMP             A       CAI29046.1      Allene-oxide cyclase    gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    CAI29046.1      MtAOC           PO:0025025       PMID: 25774204 IMP             A       CAI29046.1      Allene-oxide cyclase    gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g099620   bHLH1           PO:0005020       PMID: 25774204 IMP             A       Medtr3g099620   basic helix loop helix 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g099620   bHLH1           PO:0009006       PMID: 25774204 IMP             A       Medtr3g099620   basic helix loop helix 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g099620   bHLH1           PO:0003023       PMID: 25774204 IMP             A       Medtr3g099620   basic helix loop helix 1        gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr1g101600   CBF4            PO:0020127       PMID: 25774204 IMP             A       Medtr1g101600   C-repeat binding factor 4       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr1g101600   CBF4            PO:0000003       PMID: 25774204 IMP             A       Medtr1g101600   C-repeat binding factor 4       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    CAR57918.1      MtCCD1          PO:0009005       PMID: 25774204 IMP             A       CAR57918.1      carotenoid cleavage dioxygenase 1       gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g058380   CDC16           PO:0025025       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g058380   CDC16           PO:0009005       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g058380   CDC16           PO:0020121       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g058380   CDC16           PO:0003023       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr8g055940   chitIII-3               PO:0025025       PMID: 25774204 IMP             A       Medtr8g055940   class III chitinase     gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    ABE72958.1      CPK3            PO:0025025       PMID: 25774204 IMP             A       ABE72958.1      calcium dependent protein kinase 3      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    ABE72958.1      CPK3            PO:0003023       PMID: 25774204 IMP             A       ABE72958.1      calcium dependent protein kinase 3      gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr3g021350   cyp716A12               PO:0000003       PMID: 25774204 IMP             A       Medtr3g021350   cytochrome P450 monoxygenase    gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr2g035020   GT3 (UGT73F3)           PO:0000003       PMID: 25774204 IMP             A       Medtr2g035020   Glycosyltransferase 3   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    Medtr2g035020   GT3 (UGT73F3)           PO:0009005       PMID: 25774204 IMP             A       Medtr2g035020   Glycosyltransferase 3   gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    ADC33495.1      VPY             PO:0025025       PMID: 25774204 IMP             A       ADC33495.1      Vapyrin gene    taxon:3880      20150701        Ethan Johnson\r
+LIS    ADC33495.1      VPY             PO:0003023       PMID: 25774204 IMP             A       ADC33495.1      Vapyrin gene    taxon:3880      20150701        Ethan Johnson
\ No newline at end of file

diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_S.lycopersum.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_S.lycopersum.assoc
new file mode 100644 (file)
index 0000000..44a2573
--- /dev/null
+++ b/po-associations/test_PPPP/PO_ontology_IMP_gene_S.lycopersum.assoc
@@ -0,0 +1,147 @@
+SGN_gene       197     b               PO:0009001       PMID: 25774204 IMP             A       Solyc06g074240  Beta-carotene   gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       197     b               PO:0009059       PMID: 25774204 IMP             A       Solyc06g074240  Beta-carotene   gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       197     b               PO:0025502       PMID: 25774204 IMP             G       Solyc06g074240  Beta-carotene   gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       187     bsr4            PO:0000003       PMID: 25774204 IMP             A       Solyc05g007850  bacterial spot resistance 4     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       799     det1            PO:0025502       PMID: 25774204 IMP             G       Solyc01g056340  de-etiolated 1  gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       799     det1            PO:0009001       PMID: 25774204 IMP             A       Solyc01g056340  de-etiolated 1  gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5560    gamybl1         PO:0009010       PMID: 25774204 IMP             A       Solyc01g009070  gamyb-like 1    gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5560    gamybl1         PO:0009001       PMID: 25774204 IMP             A       Solyc01g009070  gamyb-like 1    gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       961     man4            PO:0009001       PMID: 25774204 IMP             A       Solyc01g008710  mannan endo-1,4-beta-mannosidase        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       292     y               PO:0009001       PMID: 25774204 IMP             A       Solyc01g079620  colorless fruit epidermis       gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       292     y               PO:0009085       PMID: 25774204 IMP             A       Solyc01g079620  colorless fruit epidermis       gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       8308    CD2             PO:0000022       PMID: 25774204 IMP             A       Solyc01g091630  cutin deficient 2       gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       8308    CD2             PO:0009001       PMID: 25774204 IMP             A       Solyc01g091630  cutin deficient 2       gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       8308    CD2             PO:0001002       PMID: 25774204 IMP             G       Solyc01g091630  cutin deficient 2       gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       253     chln            PO:0020138       PMID: 25774204 IMP             A       Solyc01g100490  chloronerva     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       253     chln            PO:0000003       PMID: 25774204 IMP             A       Solyc01g100490  chloronerva     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       253     chln            PO:0009025       PMID: 25774204 IMP             A       Solyc01g100490  chloronerva     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       662     Gr              PO:0025037       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       662     Gr              PO:0009001       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       662     Gr              PO:0009032       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       662     Gr              PO:0009046       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       662     Gr              PO:0007017       PMID: 25774204 IMP             G       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       1515    ddb1            PO:0009001       PMID: 25774204 IMP             A       Solyc02g021650  UV damaged DNA binding protein 1        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       1515    ddb1            PO:0025034       PMID: 25774204 IMP             A       Solyc02g021650  UV damaged DNA binding protein 1        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       301     s               PO:0009049       PMID: 25774204 IMP             A       Solyc02g077390  compound inflorescence  gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       301     s               PO:0009081       PMID: 25774204 IMP             A       Solyc02g077390  compound inflorescence  gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5483    LeT6            PO:0020139       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5483    LeT6            PO:0006011       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5483    LeT6            PO:0020038       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5483    LeT6            PO:0009025       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5483    LeT6            PO:0020049       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       5483    LeT6            PO:0005005       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       128     an              PO:0009046       PMID: 25774204 IMP             A       Solyc02g081670  anantha gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       128     an              PO:0009049       PMID: 25774204 IMP             A       Solyc02g081670  anantha gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       1094    o               PO:0009001       PMID: 25774204 IMP             A       Solyc02g085500  ovate   gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       428     d               PO:0000003       PMID: 25774204 IMP             A       Solyc02g089160  dwarf   gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       428     d               PO:0009025       PMID: 25774204 IMP             A       Solyc02g089160  dwarf   gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       1599    psy1            PO:0025037       PMID: 25774204 IMP             A       Solyc03g031860  Phytoene synthase 1     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       1599    psy1            PO:0009046       PMID: 25774204 IMP             A       Solyc03g031860  Phytoene synthase 1     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       1599    psy1            PO:0009001       PMID: 25774204 IMP             A       Solyc03g031860  Phytoene synthase 1     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       4476    zep             PO:0000003       PMID: 25774204 IMP             A       Solyc02g090890  zeaxanthin epoxidase    gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       F       CrtR-b2         PO:0009059       PMID: 25774204 IMP             A       Solyc03g007960  beta-carotene hydroxylase-2     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       1418    sucr            PO:0009001       PMID: 25774204 IMP             A       Solyc03g083910  sucrose accumulator     gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       120     asc             PO:0009047       PMID: 25774204 IMP             A       Solyc03g114600  Alternaria stem canker resistance       gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       532     fa              PO:0000003       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       532     fa              PO:0009049       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       532     fa              PO:0009046       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       532     fa              PO:0009081       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       431     div             PO:0000003       PMID: 25774204 IMP             A       Solyc03g119060  divaricata      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       431     div             PO:0025034       PMID: 25774204 IMP             A       Solyc03g119060  divaricata      gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       996     SlMlo1          PO:0000003       PMID: 25774204 IMP             A       Solyc04g049090  SlMlo1  gene    taxon:4081      20150708        Ethan Johnson\r
+SGN_gene       347     cu3             PO:0000003       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       347     cu3             PO:0020100       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       347     cu3             PO:0020030       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       347     cu3             PO:0025034       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       8373    ORR             PO:0009001       PMID: 25774204 IMP             A       Solyc04g057980  Orange Ripening gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       463     e               PO:0009025       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       463     e               PO:0020139       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       463     e               PO:0020049       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       463     e               PO:0009031       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       463     e               PO:0025034       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       463     e               PO:0000003       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       4495    cwp1            PO:0009001       PMID: 25774204 IMP             A       Solyc04g082520  cuticular water permeability 1  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       4495    cwp1            PO:0000022       PMID: 25774204 IMP             A       Solyc04g082520  cuticular water permeability 1  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       900     lyr             PO:0020039       PMID: 25774204 IMP             A       Solyc05g009380  lyrate  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       900     lyr             PO:0009062       PMID: 25774204 IMP             A       Solyc05g009380  lyrate  gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1296    mc              PO:0009031       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1296    mc              PO:0000146       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1296    mc              PO:0009052       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1296    mc              PO:0009049       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       541     Fen             PO:0000003       PMID: 25774204 IMP             A       Solyc05g013290  Fenthion sensitivity    gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1238    Pto             PO:0000003       PMID: 25774204 IMP             A       Solyc05g013300  Pseudomonas syringae pv tomato resis.   gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1296    rin             PO:0009001       PMID: 25774204 IMP             A       Solyc05g056620  ripening inhibitor      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       271     cf2             PO:0000003       PMID: 25774204 IMP             A       solyc06g008300  Cladosporium fulvum resistance-2        gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1322    sp              PO:0000003       PMID: 25774204 IMP             A       Solyc06g074350  self-pruning    gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1068    not             PO:0009025       PMID: 25774204 IMP             A       Solyc07g056570  notabilis       gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1068    not             PO:0000003       PMID: 25774204 IMP             A       Solyc07g056570  notabilis       gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       483     etr2            PO:0020142       PMID: 25774204 IMP             A       Solyc07g056580  ethylene receptor 2     gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       780     ls              PO:0009006       PMID: 25774204 IMP             A       Solyc07g066250  lateral suppresser      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       780     ls              PO:0009059       PMID: 25774204 IMP             A       Solyc07g066250  lateral suppresser      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       780     ls              PO:0000003       PMID: 25774204 IMP             A       Solyc07g066250  lateral suppresser      gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       661     gf              PO:0009001       PMID: 25774204 IMP             A       Solyc08g080090  green flesh     gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       762     lin5            PO:0009001       PMID: 25774204 IMP             A       Solyc09g010080  invertase 5     gene    taxon:4081      20150709        Ethan Johnson\r
+SGN_gene       1164    phyA            PO:0000003       PMID: 25774204 IMP             A       Solyc10g044670  phytochrome A   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       111013  sun             PO:0009001       PMID: 25774204 IMP             A       Solyc10g079240  sun     gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       246     crtiso          PO:0009001       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       246     crtiso          PO:0009029       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       246     crtiso          PO:0020144       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       246     crtiso          PO:0009025       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       755     j               PO:0000003       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       755     j               PO:0020142       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       755     j               PO:0009001       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       755     j               PO:0009010       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       755     j               PO:0000146       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       4504    GAI             PO:0004709       PMID: 25774204 IMP             A       Solyc11g011260  GAI     gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1187    ptox            PO:0009025       PMID: 25774204 IMP             A       Solyc11g011990  plastid terminal oxidase        gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       717     i2              PO:0000003       PMID: 25774204 IMP             A       Solyc11g071430  Immunity to Fusarium wilt race 2        gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       538     fas             PO:0025263       PMID: 25774204 IMP             A       Solyc11g071810  fasciated       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       538     fas             PO:0009030       PMID: 25774204 IMP             A       Solyc11g071810  fasciated       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       391     del             PO:0009001       PMID: 25774204 IMP             A       Solyc12g008980  Delta   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1605    yg2             PO:0009025       PMID: 25774204 IMP             A       Solyc12g009470  yellow-green-2  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1605    yg2             PO:0020100       PMID: 25774204 IMP             A       Solyc12g009470  yellow-green-2  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       482     etr1            PO:0020142       PMID: 25774204 IMP             A       Solyc12g011330  ethylene receptor 1     gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       277     cf9             PO:0000003       PMID: 25774204 IMP             A       AJ002236        Cladosporium fulvum resistance-9        gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       687     hero            PO:0000003       PMID: 25774204 IMP             A       AJ457051        Heterodera rostochiensis resistance     gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       881     lc              PO:0009072       PMID: 25774204 IMP             A       JF284938        Locule number   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       881     lc              PO:0025263       PMID: 25774204 IMP             A       JF285116        Locule number   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1305    Mi1-2           PO:0000003       PMID: 25774204 IMP             A       SGN-U564276     Mi-1.2  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1345    sit             PO:0000003       PMID: 25774204 IMP             A       HQ317907        sitiens gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1345    sit             PO:0009025       PMID: 25774204 IMP             A       HQ317907        sitiens gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1345    tm2             PO:0000003       PMID: 25774204 IMP             A       AF536200        Tobacco mosaic virus resistance-2       gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       111014  wo              PO:0000282       PMID: 25774204 IMP             A       Solyc02g080490  Wooly   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       111014  wo              PO:0000003       PMID: 25774204 IMP             A       Solyc02g080490  Wooly   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0020049       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0009046       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0009001       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0020139       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0009060       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0009049       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0000003       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0009047       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       212     bl              PO:0009025       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1045    nr              PO:0009001       PMID: 25774204 IMP             A       Solyc09g075440  Never ripe      gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1046    Nr2             PO:0025037       PMID: 25774204 IMP             A       Solyc09g075440  Never ripe-2    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       555     flc             PO:0009025       PMID: 25774204 IMP             A       Solyc07g066480  flacca  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       555     flc             PO:0000003       PMID: 25774204 IMP             A       Solyc07g066480  flacca  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       539     fer             PO:0009025       PMID: 25774204 IMP             A       Solyc06g051550  fe inefficient  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       539     fer             PO:0005352       PMID: 25774204 IMP             A       Solyc06g051550  fe inefficient  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       776     la              PO:0020042       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       776     la              PO:0009025       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       776     la              PO:0009047       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       776     la              PO:0025073       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       776     la              PO:0009001       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       8229    GOB             PO:0020042       PMID: 25774204 IMP             A       Solyc07g062840  goblet  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       8229    GOB             PO:0020148       PMID: 25774204 IMP             A       Solyc07g062840  goblet  gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1187    ptox            PO:0009025       PMID: 25774204 IMP             A       Solyc11g011990  plastid terminal oxidase        gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1465    APS1            PO:0009001       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1465    APS1            PO:0020127       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1465    APS1            PO:0009047       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1465    APS1            PO:0025508       PMID: 25774204 IMP             G       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1465    APS1            PO:0000025       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1465    APS1            PO:0009025       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       1465    APS1            PO:0007131       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       20827   rdr6            PO:0009025       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       20827   rdr6            PO:0000003       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       20827   rdr6            PO:0009032       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson\r
+SGN_gene       20827   rdr6            PO:0020039       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson
\ No newline at end of file

diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_medicago.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_medicago.assoc
deleted file mode 100644 (file)
index 667d042..0000000
--- a/po-associations/test_PPPP/PO_ontology_IMP_gene_medicago.assoc
+++ /dev/null
@@ -1,81 +0,0 @@
-LIS    Medtr5g030920   nork            PO:0025025       PMID: 25774204 IMP             A       Medtr5g030920   nodulation receptor kinase      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g030920   nork            PO:0003023       PMID: 25774204 IMP             A       Medtr5g030920   nodulation receptor kinase      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g086130   LYK3            PO:0025025       PMID: 25774204 IMP             A       Medtr5g086130   LYSIN MOTIF RECEPTOR-LIKE KINASE 3      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g086130   LYK3            PO:0003023       PMID: 25774204 IMP             A       Medtr5g086130   LYSIN MOTIF RECEPTOR-LIKE KINASE 3      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g086120   LYK4            PO:0025025       PMID: 25774204 IMP             A       Medtr5g086120   LYSIN MOTIF RECEPTOR-LIKE KINASE 4      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g086120   LYK4            PO:0003023       PMID: 25774204 IMP             A       Medtr5g086120   LYSIN MOTIF RECEPTOR-LIKE KINASE 4      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr2g005870   DMI1            PO:0025025       PMID: 25774204 IMP             A       Medtr2g005870   doesn't make infections 1       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr2g005870   DMI1            PO:0003023       PMID: 25774204 IMP             A       Medtr2g005870   doesn't make infections 1       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g043970   DMI3            PO:0025025       PMID: 25774204 IMP             A       Medtr8g043970   doesn't make infections 3       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g043970   DMI3            PO:0003023       PMID: 25774204 IMP             A       Medtr8g043970   doesn't make infections 3       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g022030   CDPK1           PO:0000256       PMID: 25774204 IMP             A       Medtr5g022030   calcium-dependent protein kinase 1      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g022030   CDPK1           PO:0025025       PMID: 25774204 IMP             A       Medtr5g022030   calcium-dependent protein kinase 1      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g022030   CDPK1           PO:0003023       PMID: 25774204 IMP             A       Medtr5g022030   calcium-dependent protein kinase 1      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr6g071190   FCL1            PO:0020049       PMID: 25774204 IMP             A       Medtr6g071190   fused compound leaf 1   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr6g071190   FCL1            PO:0020038       PMID: 25774204 IMP             A       Medtr6g071190   fused compound leaf 1   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr6g071190   FCL1            PO:0020055       PMID: 25774204 IMP             A       Medtr6g071190   fused compound leaf 1   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g106420   FLOT2           PO:0025025       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g106420   FLOT2           PO:0003023       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g106420   FLOT2           PO:0020127       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g106420   FLOT2           PO:0020121       PMID: 25774204 IMP             A       Medtr3g106420   Flotillin-like protein 2        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g106480   FLOT3           PO:0009005       PMID: 25774204 IMP             A       Medtr3g106480   Flotillin-like protein 3        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g106430   FLOT4           PO:0025025       PMID: 25774204 IMP             A       Medtr3g106430   Flotillin-like protein 4        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g106430   FLOT4           PO:0003023       PMID: 25774204 IMP             A       Medtr3g106430   Flotillin-like protein 4        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g014400   PALM1           PO:0025034       PMID: 25774204 IMP             A       Medtr5g014400   PALMATE-LIKE PENTAFOLIATA1      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g014400   PALM1           PO:0020038       PMID: 25774204 IMP             A       Medtr5g014400   PALMATE-LIKE PENTAFOLIATA1      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g014400   PALM1           PO:0020055       PMID: 25774204 IMP             A       Medtr5g014400   PALMATE-LIKE PENTAFOLIATA1      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr4g084140   MtNAP1          PO:0025025       PMID: 25774204 IMP             A       Medtr4g084140   Nick-associated protein 1       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr4g084140   MtNAP1          PO:0003023       PMID: 25774204 IMP             A       Medtr4g084140   Nick-associated protein 1       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr4g084140   MtNAP1          PO:0000256       PMID: 25774204 IMP             A       Medtr4g084140   Nick-associated protein 1       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0020030       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0009009       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0020049       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0009046       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0025082       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0009029       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0009030       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0020003       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0025208       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0006339       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    AFI56799.1      NAM             PO:0009001       PMID: 25774204 IMP             A       AFI56799.1      No Apical Meristem (weak allele)        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr1g090320   LIN             PO:0003023       PMID: 25774204 IMP             A       Medtr1g090320   Lumpy infections        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr4g070970   SUNN            PO:0009005       PMID: 25774204 IMP             A       Medtr4g070970   super numeric nodules   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr4g070970   SUNN            PO:0025025       PMID: 25774204 IMP             A       Medtr4g070970   super numeric nodules   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr4g070970   SUNN            PO:0003023       PMID: 25774204 IMP             A       Medtr4g070970   super numeric nodules   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g106150   MtCre1          PO:0025025       PMID: 25774204 IMP             A       Medtr8g106150   Cytokinin Response1     gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g106150   MtCre1          PO:0020121       PMID: 25774204 IMP             A       Medtr8g106150   Cytokinin Response1     gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g106150   MtCre1          PO:0003023       PMID: 25774204 IMP             A       Medtr8g106150   Cytokinin Response1     gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr7g101410   Skl1            PO:0025025       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr7g101410   Skl1            PO:0009005       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr7g101410   Skl1            PO:0020030       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr7g101410   Skl1            PO:0000012       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr7g101410   Skl1            PO:0000263       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr7g101410   Skl1            PO:0020100       PMID: 25774204 IMP             A       Medtr7g101410   Sickle 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr1g056530   HAP2.1          PO:0003023       PMID: 25774204 IMP             A       Medtr1g056530           gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g026850   CYCLOPS         PO:0025025       PMID: 25774204 IMP             A       Medtr5g026850   cyclops gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g019040   NFP             PO:0025025       PMID: 25774204 IMP             A       Medtr5g019040   Nod Factor Perception   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g019040   NFP             PO:0003023       PMID: 25774204 IMP             A       Medtr5g019040   Nod Factor Perception   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g098560   SGL1            PO:0020038       PMID: 25774204 IMP             A       Medtr3g098560   single leaflet1 gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g098560   SGL1            PO:0009046       PMID: 25774204 IMP             A       Medtr3g098560   single leaflet1 gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g011250   ANS             PO:0025034       PMID: 25774204 IMP             A       Medtr5g011250   Anthocyanidin synthase  gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr5g011250   ANS             PO:0009010       PMID: 25774204 IMP             A       Medtr5g011250   Anthocyanidin synthase  gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    CAI29046.1      MtAOC           PO:0009005       PMID: 25774204 IMP             A       CAI29046.1      Allene-oxide cyclase    gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    CAI29046.1      MtAOC           PO:0025025       PMID: 25774204 IMP             A       CAI29046.1      Allene-oxide cyclase    gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g099620   bHLH1           PO:0005020       PMID: 25774204 IMP             A       Medtr3g099620   basic helix loop helix 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g099620   bHLH1           PO:0009006       PMID: 25774204 IMP             A       Medtr3g099620   basic helix loop helix 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g099620   bHLH1           PO:0003023       PMID: 25774204 IMP             A       Medtr3g099620   basic helix loop helix 1        gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr1g101600   CBF4            PO:0020127       PMID: 25774204 IMP             A       Medtr1g101600   C-repeat binding factor 4       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr1g101600   CBF4            PO:0000003       PMID: 25774204 IMP             A       Medtr1g101600   C-repeat binding factor 4       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    CAR57918.1      MtCCD1          PO:0009005       PMID: 25774204 IMP             A       CAR57918.1      carotenoid cleavage dioxygenase 1       gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g058380   CDC16           PO:0025025       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g058380   CDC16           PO:0009005       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g058380   CDC16           PO:0020121       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g058380   CDC16           PO:0003023       PMID: 25774204 IMP             A       Medtr8g058380   cell division cycle 16  gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr8g055940   chitIII-3               PO:0025025       PMID: 25774204 IMP             A       Medtr8g055940   class III chitinase     gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    ABE72958.1      CPK3            PO:0025025       PMID: 25774204 IMP             A       ABE72958.1      calcium dependent protein kinase 3      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    ABE72958.1      CPK3            PO:0003023       PMID: 25774204 IMP             A       ABE72958.1      calcium dependent protein kinase 3      gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr3g021350   cyp716A12               PO:0000003       PMID: 25774204 IMP             A       Medtr3g021350   cytochrome P450 monoxygenase    gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr2g035020   GT3 (UGT73F3)           PO:0000003       PMID: 25774204 IMP             A       Medtr2g035020   Glycosyltransferase 3   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    Medtr2g035020   GT3 (UGT73F3)           PO:0009005       PMID: 25774204 IMP             A       Medtr2g035020   Glycosyltransferase 3   gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    ADC33495.1      VPY             PO:0025025       PMID: 25774204 IMP             A       ADC33495.1      Vapyrin gene    taxon:3880      20150701        Ethan Johnson\r
-LIS    ADC33495.1      VPY             PO:0003023       PMID: 25774204 IMP             A       ADC33495.1      Vapyrin gene    taxon:3880      20150701        Ethan Johnson
\ No newline at end of file

diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_solanum.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_solanum.assoc
deleted file mode 100644 (file)
index 44a2573..0000000
--- a/po-associations/test_PPPP/PO_ontology_IMP_gene_solanum.assoc
+++ /dev/null
@@ -1,147 +0,0 @@
-SGN_gene       197     b               PO:0009001       PMID: 25774204 IMP             A       Solyc06g074240  Beta-carotene   gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       197     b               PO:0009059       PMID: 25774204 IMP             A       Solyc06g074240  Beta-carotene   gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       197     b               PO:0025502       PMID: 25774204 IMP             G       Solyc06g074240  Beta-carotene   gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       187     bsr4            PO:0000003       PMID: 25774204 IMP             A       Solyc05g007850  bacterial spot resistance 4     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       799     det1            PO:0025502       PMID: 25774204 IMP             G       Solyc01g056340  de-etiolated 1  gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       799     det1            PO:0009001       PMID: 25774204 IMP             A       Solyc01g056340  de-etiolated 1  gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5560    gamybl1         PO:0009010       PMID: 25774204 IMP             A       Solyc01g009070  gamyb-like 1    gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5560    gamybl1         PO:0009001       PMID: 25774204 IMP             A       Solyc01g009070  gamyb-like 1    gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       961     man4            PO:0009001       PMID: 25774204 IMP             A       Solyc01g008710  mannan endo-1,4-beta-mannosidase        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       292     y               PO:0009001       PMID: 25774204 IMP             A       Solyc01g079620  colorless fruit epidermis       gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       292     y               PO:0009085       PMID: 25774204 IMP             A       Solyc01g079620  colorless fruit epidermis       gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       8308    CD2             PO:0000022       PMID: 25774204 IMP             A       Solyc01g091630  cutin deficient 2       gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       8308    CD2             PO:0009001       PMID: 25774204 IMP             A       Solyc01g091630  cutin deficient 2       gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       8308    CD2             PO:0001002       PMID: 25774204 IMP             G       Solyc01g091630  cutin deficient 2       gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       253     chln            PO:0020138       PMID: 25774204 IMP             A       Solyc01g100490  chloronerva     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       253     chln            PO:0000003       PMID: 25774204 IMP             A       Solyc01g100490  chloronerva     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       253     chln            PO:0009025       PMID: 25774204 IMP             A       Solyc01g100490  chloronerva     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       662     Gr              PO:0025037       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       662     Gr              PO:0009001       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       662     Gr              PO:0009032       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       662     Gr              PO:0009046       PMID: 25774204 IMP             A       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       662     Gr              PO:0007017       PMID: 25774204 IMP             G       Solyc01g104340  green ripe      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       1515    ddb1            PO:0009001       PMID: 25774204 IMP             A       Solyc02g021650  UV damaged DNA binding protein 1        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       1515    ddb1            PO:0025034       PMID: 25774204 IMP             A       Solyc02g021650  UV damaged DNA binding protein 1        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       301     s               PO:0009049       PMID: 25774204 IMP             A       Solyc02g077390  compound inflorescence  gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       301     s               PO:0009081       PMID: 25774204 IMP             A       Solyc02g077390  compound inflorescence  gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5483    LeT6            PO:0020139       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5483    LeT6            PO:0006011       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5483    LeT6            PO:0020038       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5483    LeT6            PO:0009025       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5483    LeT6            PO:0020049       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       5483    LeT6            PO:0005005       PMID: 25774204 IMP             A       Solyc02g081120  class 1 knotted-like homeodomain protein        gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       128     an              PO:0009046       PMID: 25774204 IMP             A       Solyc02g081670  anantha gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       128     an              PO:0009049       PMID: 25774204 IMP             A       Solyc02g081670  anantha gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       1094    o               PO:0009001       PMID: 25774204 IMP             A       Solyc02g085500  ovate   gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       428     d               PO:0000003       PMID: 25774204 IMP             A       Solyc02g089160  dwarf   gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       428     d               PO:0009025       PMID: 25774204 IMP             A       Solyc02g089160  dwarf   gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       1599    psy1            PO:0025037       PMID: 25774204 IMP             A       Solyc03g031860  Phytoene synthase 1     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       1599    psy1            PO:0009046       PMID: 25774204 IMP             A       Solyc03g031860  Phytoene synthase 1     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       1599    psy1            PO:0009001       PMID: 25774204 IMP             A       Solyc03g031860  Phytoene synthase 1     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       4476    zep             PO:0000003       PMID: 25774204 IMP             A       Solyc02g090890  zeaxanthin epoxidase    gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       F       CrtR-b2         PO:0009059       PMID: 25774204 IMP             A       Solyc03g007960  beta-carotene hydroxylase-2     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       1418    sucr            PO:0009001       PMID: 25774204 IMP             A       Solyc03g083910  sucrose accumulator     gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       120     asc             PO:0009047       PMID: 25774204 IMP             A       Solyc03g114600  Alternaria stem canker resistance       gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       532     fa              PO:0000003       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       532     fa              PO:0009049       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       532     fa              PO:0009046       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       532     fa              PO:0009081       PMID: 25774204 IMP             A       Solyc03g118160  falsiflora      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       431     div             PO:0000003       PMID: 25774204 IMP             A       Solyc03g119060  divaricata      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       431     div             PO:0025034       PMID: 25774204 IMP             A       Solyc03g119060  divaricata      gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       996     SlMlo1          PO:0000003       PMID: 25774204 IMP             A       Solyc04g049090  SlMlo1  gene    taxon:4081      20150708        Ethan Johnson\r
-SGN_gene       347     cu3             PO:0000003       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       347     cu3             PO:0020100       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       347     cu3             PO:0020030       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       347     cu3             PO:0025034       PMID: 25774204 IMP             A       Solyc04g051510  curl-3  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       8373    ORR             PO:0009001       PMID: 25774204 IMP             A       Solyc04g057980  Orange Ripening gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       463     e               PO:0009025       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       463     e               PO:0020139       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       463     e               PO:0020049       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       463     e               PO:0009031       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       463     e               PO:0025034       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       463     e               PO:0000003       PMID: 25774204 IMP             A       Solyc04g076850  entire  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       4495    cwp1            PO:0009001       PMID: 25774204 IMP             A       Solyc04g082520  cuticular water permeability 1  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       4495    cwp1            PO:0000022       PMID: 25774204 IMP             A       Solyc04g082520  cuticular water permeability 1  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       900     lyr             PO:0020039       PMID: 25774204 IMP             A       Solyc05g009380  lyrate  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       900     lyr             PO:0009062       PMID: 25774204 IMP             A       Solyc05g009380  lyrate  gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1296    mc              PO:0009031       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1296    mc              PO:0000146       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1296    mc              PO:0009052       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1296    mc              PO:0009049       PMID: 25774204 IMP             A       Solyc05g012020  macrocalyx      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       541     Fen             PO:0000003       PMID: 25774204 IMP             A       Solyc05g013290  Fenthion sensitivity    gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1238    Pto             PO:0000003       PMID: 25774204 IMP             A       Solyc05g013300  Pseudomonas syringae pv tomato resis.   gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1296    rin             PO:0009001       PMID: 25774204 IMP             A       Solyc05g056620  ripening inhibitor      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       271     cf2             PO:0000003       PMID: 25774204 IMP             A       solyc06g008300  Cladosporium fulvum resistance-2        gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1322    sp              PO:0000003       PMID: 25774204 IMP             A       Solyc06g074350  self-pruning    gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1068    not             PO:0009025       PMID: 25774204 IMP             A       Solyc07g056570  notabilis       gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1068    not             PO:0000003       PMID: 25774204 IMP             A       Solyc07g056570  notabilis       gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       483     etr2            PO:0020142       PMID: 25774204 IMP             A       Solyc07g056580  ethylene receptor 2     gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       780     ls              PO:0009006       PMID: 25774204 IMP             A       Solyc07g066250  lateral suppresser      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       780     ls              PO:0009059       PMID: 25774204 IMP             A       Solyc07g066250  lateral suppresser      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       780     ls              PO:0000003       PMID: 25774204 IMP             A       Solyc07g066250  lateral suppresser      gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       661     gf              PO:0009001       PMID: 25774204 IMP             A       Solyc08g080090  green flesh     gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       762     lin5            PO:0009001       PMID: 25774204 IMP             A       Solyc09g010080  invertase 5     gene    taxon:4081      20150709        Ethan Johnson\r
-SGN_gene       1164    phyA            PO:0000003       PMID: 25774204 IMP             A       Solyc10g044670  phytochrome A   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       111013  sun             PO:0009001       PMID: 25774204 IMP             A       Solyc10g079240  sun     gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       246     crtiso          PO:0009001       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       246     crtiso          PO:0009029       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       246     crtiso          PO:0020144       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       246     crtiso          PO:0009025       PMID: 25774204 IMP             A       Solyc10g081650  carotenoid isomerase    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       755     j               PO:0000003       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       755     j               PO:0020142       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       755     j               PO:0009001       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       755     j               PO:0009010       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       755     j               PO:0000146       PMID: 25774204 IMP             A       Solyc11g010570  jointless       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       4504    GAI             PO:0004709       PMID: 25774204 IMP             A       Solyc11g011260  GAI     gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1187    ptox            PO:0009025       PMID: 25774204 IMP             A       Solyc11g011990  plastid terminal oxidase        gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       717     i2              PO:0000003       PMID: 25774204 IMP             A       Solyc11g071430  Immunity to Fusarium wilt race 2        gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       538     fas             PO:0025263       PMID: 25774204 IMP             A       Solyc11g071810  fasciated       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       538     fas             PO:0009030       PMID: 25774204 IMP             A       Solyc11g071810  fasciated       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       391     del             PO:0009001       PMID: 25774204 IMP             A       Solyc12g008980  Delta   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1605    yg2             PO:0009025       PMID: 25774204 IMP             A       Solyc12g009470  yellow-green-2  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1605    yg2             PO:0020100       PMID: 25774204 IMP             A       Solyc12g009470  yellow-green-2  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       482     etr1            PO:0020142       PMID: 25774204 IMP             A       Solyc12g011330  ethylene receptor 1     gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       277     cf9             PO:0000003       PMID: 25774204 IMP             A       AJ002236        Cladosporium fulvum resistance-9        gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       687     hero            PO:0000003       PMID: 25774204 IMP             A       AJ457051        Heterodera rostochiensis resistance     gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       881     lc              PO:0009072       PMID: 25774204 IMP             A       JF284938        Locule number   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       881     lc              PO:0025263       PMID: 25774204 IMP             A       JF285116        Locule number   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1305    Mi1-2           PO:0000003       PMID: 25774204 IMP             A       SGN-U564276     Mi-1.2  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1345    sit             PO:0000003       PMID: 25774204 IMP             A       HQ317907        sitiens gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1345    sit             PO:0009025       PMID: 25774204 IMP             A       HQ317907        sitiens gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1345    tm2             PO:0000003       PMID: 25774204 IMP             A       AF536200        Tobacco mosaic virus resistance-2       gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       111014  wo              PO:0000282       PMID: 25774204 IMP             A       Solyc02g080490  Wooly   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       111014  wo              PO:0000003       PMID: 25774204 IMP             A       Solyc02g080490  Wooly   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0020049       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0009046       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0009001       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0020139       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0009060       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0009049       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0000003       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0009047       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       212     bl              PO:0009025       PMID: 25774204 IMP             A       Solyc11g069030  blind   gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1045    nr              PO:0009001       PMID: 25774204 IMP             A       Solyc09g075440  Never ripe      gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1046    Nr2             PO:0025037       PMID: 25774204 IMP             A       Solyc09g075440  Never ripe-2    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       555     flc             PO:0009025       PMID: 25774204 IMP             A       Solyc07g066480  flacca  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       555     flc             PO:0000003       PMID: 25774204 IMP             A       Solyc07g066480  flacca  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       539     fer             PO:0009025       PMID: 25774204 IMP             A       Solyc06g051550  fe inefficient  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       539     fer             PO:0005352       PMID: 25774204 IMP             A       Solyc06g051550  fe inefficient  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       776     la              PO:0020042       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       776     la              PO:0009025       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       776     la              PO:0009047       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       776     la              PO:0025073       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       776     la              PO:0009001       PMID: 25774204 IMP             A       Solyc07g062680  lanceolate      gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       8229    GOB             PO:0020042       PMID: 25774204 IMP             A       Solyc07g062840  goblet  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       8229    GOB             PO:0020148       PMID: 25774204 IMP             A       Solyc07g062840  goblet  gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1187    ptox            PO:0009025       PMID: 25774204 IMP             A       Solyc11g011990  plastid terminal oxidase        gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1465    APS1            PO:0009001       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1465    APS1            PO:0020127       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1465    APS1            PO:0009047       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1465    APS1            PO:0025508       PMID: 25774204 IMP             G       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1465    APS1            PO:0000025       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1465    APS1            PO:0009025       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       1465    APS1            PO:0007131       PMID: 25774204 IMP             A       APS1    APS1    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       20827   rdr6            PO:0009025       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       20827   rdr6            PO:0000003       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       20827   rdr6            PO:0009032       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson\r
-SGN_gene       20827   rdr6            PO:0020039       PMID: 25774204 IMP             A       Solyc04g014870  wiry    gene    taxon:4081      20150710        Ethan Johnson
\ No newline at end of file

diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc
deleted file mode 100644 (file)
index 91276bd..0000000
--- a/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc
+++ /dev/null
@@ -1,34 +0,0 @@
-SOY_gene       Glyma01g36600   E2-1            PO:0007016       PMID: 25774204 IMP             G       Glyma01g36600   E2      gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma02g05450   Wp              PO:0009046       PMID: 25774204 IMP             A       Glyma02g05450   Wp      gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma02g05450   Wp              PO:0009088       PMID: 25774204 IMP             A       Glyma02g05450   Wp      gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma02g39230   GmFAD3-2                PO:0009010       PMID: 25774204 IMP             A       Glyma02g39230   FAD3-2  gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma03g32500   GmLPA1-1                PO:0009010       PMID: 25774204 IMP             A       Glyma03g32500   LPA1-1  gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma05g27840   Eu1-1           PO:0009009       PMID: 25774204 IMP             A       Glyma05g27840   ESU     gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma06g18890.1 RS2             PO:0009010       PMID: 25774204 IMP             A       Glyma06g18890.1 Raffinose synthase      gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma06g18890.1 RS1-2           PO:0009010       PMID: 25774204 IMP             A       Glyma06g18890.1 Raffinose synthase      gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma06g19820   AMDH2 BADH2             PO:0009010       PMID: 25774204 IMP             A       Glyma06g19820   GmAMDH2 gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma06g21920   T               PO:0000282       PMID: 25774204 IMP             A       Glyma06g21920   Tawny   gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma06g21920   T               PO:0020063       PMID: 25774204 IMP             A       Glyma06g21920   Tawny   gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma08g06630   ANR1            PO:0009088       PMID: 25774204 IMP             A       Glyma08g06630   ANR1    gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma08g08970   Eu3-1           PO:0000003       PMID: 25774204 IMP             A       Glyma08g08970   GmUreG  gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma09g36983                   PO:0020063       PMID: 25774204 IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma09g36983                   PO:0009088       PMID: 25774204 IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    taxon:3847      20150716        Ethan Johnson\r
-SOY_gene       Glyma10g42470   GmFAD2-1                PO:0009010       PMID: 25774204 IMP             A       Glyma10g42470   FAD2-1  gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma11g27480   GmAS1-A         PO:0009088       PMID: 25774204 IMP             A       Glyma11g27480   Asparagine synthase 1   gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma11g27480   GmAS1-A         PO:0009010       PMID: 25774204 IMP             A       Glyma11g27480   Asparagine synthase 1   gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma11g37250   EU4-1           PO:0000003       PMID: 25774204 IMP             A       Glyma11g37250   UU      gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma14g04380   Eu2-1           PO:0000003       PMID: 25774204 IMP             A       Glyma14g04380   GmUreF  gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma14g09510   GmASPGB1-A              PO:0009088       PMID: 25774204 IMP             A       Glyma14g09510   Asparaginase B1 gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma14g09510   GmASPGB1-A              PO:0009010       PMID: 25774204 IMP             A       Glyma14g09510   Asparaginase B1 gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma14g27990   GmFAB2-3                PO:0009010       PMID: 25774204 IMP             A       Glyma14g27990   FAB2-3  gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma14g37350   GmFAD3-1                PO:0009010       PMID: 25774204 IMP             A       Glyma14g37350   FAD3-1  gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma16g01980   GmLHY1          PO:0020100       PMID: 25774204 IMP             A       Glyma16g01980   MYB Transcription Factor        gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma16g01980   GmLHY1          PO:0007016       PMID: 25774204 IMP             G       Glyma16g01980   MYB Transcription Factor        gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma16g04830   GmFT5-A         PO:0007016       PMID: 25774204 IMP             G       Glyma16g04830   FT-5A   gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma16g26660   GmFT2-A         PO:0007016       PMID: 25774204 IMP             G       Glyma16g26660   FT-2A   gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma18g02210   MIPS1           PO:0007030       PMID: 25774204 IMP             G       Glyma18g02210   GmMIPS1 gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma18g06950   GmFAD3-3                PO:0009010       PMID: 25774204 IMP             A       Glyma18g06950   FAD3-3  gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma19g35230   GmLPA1-2                PO:0009010       PMID: 25774204 IMP             A       Glyma19g35230   LPA1-2  gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma20g24530   GmFAD2-2                PO:0009010       PMID: 25774204 IMP             A       Glyma20g24530   FAD2-2  gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma20g25000   Ln              PO:0020049       PMID: 25774204 IMP             A       Glyma20g25000   GmJagged1       gene    taxon:3847      20150717        Ethan Johnson\r
-SOY_gene       Glyma20g25000   Ln              PO:0000003       PMID: 25774204 IMP             A       Glyma20g25000   GmJagged1       gene    taxon:3847      20150717        Ethan Johnson
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