Fix O. sativa Aus kasalath

svn path=/; revision=662

diff --git a/interactome_scripts/find_species.pl b/interactome_scripts/find_species.pl
index fd38e361dbd1b37c1b7cdaf8acbc28c50a5e6b93..10716bcb01c5eef47d85610080ebd7b0a7e2312b 100755 (executable)
--- a/interactome_scripts/find_species.pl
+++ b/interactome_scripts/find_species.pl
@@ -226,6 +226,8 @@ sub find_species {
                $species = "Oryza_punctata";
        }elsif ($temp =~ /Oryza\_rufipogon/) {
                $species = "Oryza_rufipogon";
+       }elsif ($temp =~ /Oryza\_sativa\.AUS\.kasalath/) {
+               $species = "Oryza_sativa.AUS.kasalath";
        }elsif ($temp =~ /Oryza\_sativa\.AUS\.N22/) {
                $species = "Oryza_sativa.AUS.N22";
        }elsif ($temp =~ /Oryza\_sativa.indica\_/) {
@@ -634,6 +636,9 @@ sub find_gene {
                $gene = ensembl_gene($gene_header);
        }elsif ($species eq "Oryza_sativa.indica") {
                $gene = ensembl_gene($gene_header);
+       }elsif ($species eq "Oryza_sativa.AUS.kasalath") {
+               my ($gene_id, $strand, $start, $stop) = split(/\|/, $gene_header);
+               $gene = $gene_id;
        }elsif ($species eq "Oryza_sativa.AUS.N22") {
                $gene = $gene_header;
        }elsif ($species eq "Oryza_sativa.indica.9311.OGE") {