Add species

svn path=/; revision=85

diff --git a/interactome_scripts/find_species.pl b/interactome_scripts/find_species.pl
index 8e83af3d1311184b7eefc152df2431d1e603c02f..ef7188dfde54939b492eb52a9c2c7b86fccc3ac0 100755 (executable)
--- a/interactome_scripts/find_species.pl
+++ b/interactome_scripts/find_species.pl
@@ -264,10 +264,10 @@ sub find_gene {
        }elsif ($species eq "Trichoderma_reesii") {
                my ($source, $spec, $int_id, $gene_id) = split(/\|/,$gene_header);
                $gene = $gene_id;
-       }elsif ($species eq "Trichodesmium_erythraeum") {
+       }elsif ($species eq "Trichoderma_virens") {
                my ($temp,$unknown,$source,$gene_id,$func) = split(/\|/, $gene_header);
                $gene = $gene_id;
-       }elsif ($species eq "Trichoderma_virens") {
+       }elsif ($species eq "Trichodesmium_erythraeum") {
                my ($temp,$unknown,$source,$gene_id,$func) = split(/\|/, $gene_header);
                $gene = $gene_id;
        }elsif ($species eq "Vitis_vinifera") {
@@ -292,21 +292,30 @@ sub all_species_array {
        push (@spec_array, "Caenorhabditis_elegans");
        push (@spec_array, "Carica_papaya");
        push (@spec_array, "Chlamydomonas_reinhardtii");
+       push (@spec_array, "Citrus_clementina");
+       push (@spec_array, "Citrus_sinensis");
        push (@spec_array, "Cucumis_sativus");
        push (@spec_array, "Danio_rerio");
        push (@spec_array, "Drosophila_melanogaster");
        push (@spec_array, "Ectocarpus_siliculosus");
+       push (@spec_array, "Epichloe_festuca");
        push (@spec_array, "Escherichia_coli");
+       push (@spec_array, "Eucalyptus_grandis");
        push (@spec_array, "Fragaria_vesca");
+       push (@spec_array, "Fusarium_graminearum");
+       push (@spec_array, "Fusarium_oxysporum");
+       push (@spec_array, "Fusarium_verticilliodes");
        push (@spec_array, "Glycine_max");
        push (@spec_array, "Homo_sapiens");
        push (@spec_array, "Laccaria_bicolor");
        push (@spec_array, "Magnaporthe_grissa");
+       push (@spec_array, "Malus_domestica");
        push (@spec_array, "Manihot_esculenta");
        push (@spec_array, "Medicago_truncatula");
        push (@spec_array, "Mimulus_guttatus");
        push (@spec_array, "Mus_musculus");
        push (@spec_array, "Neurospora_crassa");
+       push (@spec_array, "Nectria_haematococca");
        push (@spec_array, "Nostoc_punctiforme");
        push (@spec_array, "Oryza_sativa");
        push (@spec_array, "Pediculus_humanus");
@@ -321,6 +330,10 @@ sub all_species_array {
        push (@spec_array, "Selaginella_moellendorffii");
        push (@spec_array, "Sorghum_bicolor");
        push (@spec_array, "Synechocystis_pcc6803");
+       push (@spec_array, "Tolypocladium_inflatum");
+       push (@spec_array, "Trichoderma_atroviride");
+       push (@spec_array, "Trichoderma_reesii");
+       push (@spec_array, "Trichoderma_virens");
        push (@spec_array, "Trichodesmium_erythraeum");
        push (@spec_array, "Vitis_vinifera");
        push (@spec_array, "Zea_mays");