Updated for AraCyc 10 run

svn path=/; revision=485

diff --git a/Personnel/preecej/perl_singletons/reactome_chebi_mapping/reactome_chebi_mapping.pl b/Personnel/preecej/perl_singletons/reactome_chebi_mapping/reactome_chebi_mapping.pl
index cf6f4c9c6ef868a171ceca8ab17d7f8ca6f4bc5c..9f25b33429fd03c081463eb9ebee90d5f19fbc7a 100755 (executable)
--- a/Personnel/preecej/perl_singletons/reactome_chebi_mapping/reactome_chebi_mapping.pl
+++ b/Personnel/preecej/perl_singletons/reactome_chebi_mapping/reactome_chebi_mapping.pl
@@ -15,7 +15,7 @@ use strict;
 #
 #   CHEBI OBO file (preset)
 #
-#   Reactome file (preset, provided by Guanming Wu)
+#   Reactome file (preset, template provided by Guanming Wu)
 #   (Header)    [ReactomeID]    [Compound_Name]            [CAS]           [LIGAND]    [Cyc]
 #   (Row)       923893          S-adenosyl-L-methionine    29908-03-0      C00019      S-ADENOSYLMETHIONINE        ** the '-' (dash) symbol will be applied to any empty columns
 #
@@ -42,8 +42,8 @@ use GO::Parser;
 # ---------------------------------------------------------------------------
 
 # set paths to data files
-my $data_path = "/home/preecej/Documents/projects/reactome/reactome_to_chebi_mapping/AraCyc/gk_central_041811/no_synonyms/";
-my $chebi_obo_file = "../../chebi_v78.obo";
+my $data_path = "/home/preecej/Documents/projects/reactome/reactome_to_chebi_mapping/AraCyc/aracyc_10/no_synonyms/";
+my $chebi_obo_file = "../../chebi_v104.obo";
 my $reactome_file = "AraReferenceMolecules.txt";
 my $mapped_output_file = "1.2_reactome_chebi_mapping_complete.txt";
 my $sorted_output_file = "1.2_reactome_chebi_mapping_complete_sorted.txt";