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revised database column in /PO_ontology_IMP_gene_soybean.assoc
authormeiera <meiera@localhost>
Wed, 19 Aug 2015 19:58:49 +0000 (19:58 +0000)
committermeiera <meiera@localhost>
Wed, 19 Aug 2015 19:58:49 +0000 (19:58 +0000)
svn path=/; revision=511

po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc patch | blob | history

diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc
index e15bdbf2f11ddd6af5ed4814759557791d9c1035..01cd041ae3e7ef594cbd61ac30a92a852ea91e29 100644 (file)
--- a/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc
+++ b/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc
@@ -1,34 +1,34 @@
-       Glyma01g36600   E2-1    whole plant flowering stage     PO:0007016              IMP             G       Glyma01g36600   E2      gene    3847    20150716        Ethan Johnson\r
-       Glyma02g05450   Wp      flower  PO:0009046              IMP             A       Glyma02g05450   Wp      gene    3847    20150716        Ethan Johnson\r
-       Glyma02g05450   Wp      seed coat       PO:0009088              IMP             A       Glyma02g05450   Wp      gene    3847    20150716        Ethan Johnson\r
-       Glyma02g39230   GmFAD3-2        seed    PO:0009010              IMP             A       Glyma02g39230   FAD3-2  gene    3847    20150716        Ethan Johnson\r
-       Glyma03g32500   GmLPA1-1        seed    PO:0009010              IMP             A       Glyma03g32500   LPA1-1  gene    3847    20150716        Ethan Johnson\r
-       Glyma05g27840   Eu1-1   plant embryo    PO:0009009              IMP             A       Glyma05g27840   ESU     gene    3847    20150716        Ethan Johnson\r
-       Glyma06g18890.1 RS2     seed    PO:0009010              IMP             A       Glyma06g18890.1 Raffinose synthase      gene    3847    20150716        Ethan Johnson\r
-       Glyma06g18890.1 RS1-2   seed    PO:0009010              IMP             A       Glyma06g18890.1 Raffinose synthase      gene    3847    20150716        Ethan Johnson\r
-       Glyma06g19820   AMDH2 BADH2     seed    PO:0009010              IMP             A       Glyma06g19820   GmAMDH2 gene    3847    20150716        Ethan Johnson\r
-       Glyma06g21920   T       trichome        PO:0000282              IMP             A       Glyma06g21920   Tawny   gene    3847    20150716        Ethan Johnson\r
-       Glyma06g21920   T       hilum   PO:0020063              IMP             A       Glyma06g21920   Tawny   gene    3847    20150716        Ethan Johnson\r
-       Glyma08g06630   ANR1    seed coat       PO:0009088              IMP             A       Glyma08g06630   ANR1    gene    3847    20150716        Ethan Johnson\r
-       Glyma08g08970   Eu3-1   whole plant     PO:0000003              IMP             A       Glyma08g08970   GmUreG                          \r
-       Glyma09g36983           Brown hilum     PO:0020063              IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    3847    20150716        Ethan Johnson\r
-       Glyma09g36983           seed coat       PO:0009088              IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    3847    20150716        Ethan Johnson\r
-       Glyma10g42470   GmFAD2-1        seed    PO:0009010              IMP             A       Glyma10g42470   FAD2-1  gene    3847    20150717        Ethan Johnson\r
-       Glyma11g27480   GmAS1-A seed coat       PO:0009088              IMP             A       Glyma11g27480   Asparagine synthase 1   gene    3847    20150717        Ethan Johnson\r
-       Glyma11g27480   GmAS1-A seed    PO:0009010              IMP             A       Glyma11g27480   Asparagine synthase 1   gene    3847    20150717        Ethan Johnson\r
-       Glyma11g37250   EU4-1   whole plant     PO:0000003              IMP             A       Glyma11g37250   UU      gene    3847    20150717        Ethan Johnson\r
-       Glyma14g04380   Eu2-1   whole plant     PO:0000003              IMP             A       Glyma14g04380   GmUreF  gene    3847    20150717        Ethan Johnson\r
-       Glyma14g09510   GmASPGB1-A      seed coat       PO:0009088              IMP             A       Glyma14g09510   Asparaginase B1 gene    3847    20150717        Ethan Johnson\r
-       Glyma14g09510   GmASPGB1-A      seed    PO:0009010              IMP             A       Glyma14g09510   Asparaginase B1 gene    3847    20150717        Ethan Johnson\r
-       Glyma14g27990   GmFAB2-3        seed    PO:0009010              IMP             A       Glyma14g27990   FAB2-3  gene    3847    20150717        Ethan Johnson\r
-       Glyma14g37350   GmFAD3-1        seed    PO:0009010              IMP             A       Glyma14g37350   FAD3-1  gene    3847    20150717        Ethan Johnson\r
-       Glyma16g01980   GmLHY1  hypocotyl       PO:0020100              IMP             A       Glyma16g01980   MYB Transcription Factor        gene    3847    20150717        Ethan Johnson\r
-       Glyma16g01980   GmLHY1  whole plant flowering stage     PO:0007016              IMP             G       Glyma16g01980   MYB Transcription Factor        gene    3847    20150717        Ethan Johnson\r
-       Glyma16g04830   GmFT5-A whole plant flowering stage     PO:0007016              IMP             G       Glyma16g04830   FT-5A   gene    3847    20150717        Ethan Johnson\r
-       Glyma16g26660   GmFT2-A whole plant flowering stage     PO:0007016              IMP             G       Glyma16g26660   FT-2A   gene    3847    20150717        Ethan Johnson\r
-       Glyma18g02210   MIPS1   seedling shoot emergence stage  PO:0007030              IMP             G       Glyma18g02210   GmMIPS1 gene    3847    20150717        Ethan Johnson\r
-       Glyma18g06950   GmFAD3-3        seed    PO:0009010              IMP             A       Glyma18g06950   FAD3-3  gene    3847    20150717        Ethan Johnson\r
-       Glyma19g35230   GmLPA1-2        seed    PO:0009010              IMP             A       Glyma19g35230   LPA1-2  gene    3847    20150717        Ethan Johnson\r
-       Glyma20g24530   GmFAD2-2        seed    PO:0009010              IMP             A       Glyma20g24530   FAD2-2  gene    3847    20150717        Ethan Johnson\r
-       Glyma20g25000   Ln      leaflet PO:0020049              IMP             A       Glyma20g25000   GmJagged1       gene    3847    20150717        Ethan Johnson\r
-       Glyma20g25000   Ln      whole plant     PO:0000003              IMP             A       Glyma20g25000   GmJagged1       gene    3847    20150717        Ethan Johnson
\ No newline at end of file
+SoyBase        Glyma01g36600   E2-1    whole plant flowering stage     PO:0007016              IMP             G       Glyma01g36600   E2      gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma02g05450   Wp      flower  PO:0009046              IMP             A       Glyma02g05450   Wp      gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma02g05450   Wp      seed coat       PO:0009088              IMP             A       Glyma02g05450   Wp      gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma02g39230   GmFAD3-2        seed    PO:0009010              IMP             A       Glyma02g39230   FAD3-2  gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma03g32500   GmLPA1-1        seed    PO:0009010              IMP             A       Glyma03g32500   LPA1-1  gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma05g27840   Eu1-1   plant embryo    PO:0009009              IMP             A       Glyma05g27840   ESU     gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma06g18890.1 RS2     seed    PO:0009010              IMP             A       Glyma06g18890.1 Raffinose synthase      gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma06g18890.1 RS1-2   seed    PO:0009010              IMP             A       Glyma06g18890.1 Raffinose synthase      gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma06g19820   AMDH2 BADH2     seed    PO:0009010              IMP             A       Glyma06g19820   GmAMDH2 gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma06g21920   T       trichome        PO:0000282              IMP             A       Glyma06g21920   Tawny   gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma06g21920   T       hilum   PO:0020063              IMP             A       Glyma06g21920   Tawny   gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma08g06630   ANR1    seed coat       PO:0009088              IMP             A       Glyma08g06630   ANR1    gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma08g08970   Eu3-1   whole plant     PO:0000003              IMP             A       Glyma08g08970   GmUreG                          \r
+SoyBase        Glyma09g36983           Brown hilum     PO:0020063              IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma09g36983           seed coat       PO:0009088              IMP             A       Glyma09g36983   R2R MYB Transcription Factor    gene    3847    20150716        Ethan Johnson\r
+SoyBase        Glyma10g42470   GmFAD2-1        seed    PO:0009010              IMP             A       Glyma10g42470   FAD2-1  gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma11g27480   GmAS1-A seed coat       PO:0009088              IMP             A       Glyma11g27480   Asparagine synthase 1   gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma11g27480   GmAS1-A seed    PO:0009010              IMP             A       Glyma11g27480   Asparagine synthase 1   gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma11g37250   EU4-1   whole plant     PO:0000003              IMP             A       Glyma11g37250   UU      gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma14g04380   Eu2-1   whole plant     PO:0000003              IMP             A       Glyma14g04380   GmUreF  gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma14g09510   GmASPGB1-A      seed coat       PO:0009088              IMP             A       Glyma14g09510   Asparaginase B1 gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma14g09510   GmASPGB1-A      seed    PO:0009010              IMP             A       Glyma14g09510   Asparaginase B1 gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma14g27990   GmFAB2-3        seed    PO:0009010              IMP             A       Glyma14g27990   FAB2-3  gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma14g37350   GmFAD3-1        seed    PO:0009010              IMP             A       Glyma14g37350   FAD3-1  gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma16g01980   GmLHY1  hypocotyl       PO:0020100              IMP             A       Glyma16g01980   MYB Transcription Factor        gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma16g01980   GmLHY1  whole plant flowering stage     PO:0007016              IMP             G       Glyma16g01980   MYB Transcription Factor        gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma16g04830   GmFT5-A whole plant flowering stage     PO:0007016              IMP             G       Glyma16g04830   FT-5A   gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma16g26660   GmFT2-A whole plant flowering stage     PO:0007016              IMP             G       Glyma16g26660   FT-2A   gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma18g02210   MIPS1   seedling shoot emergence stage  PO:0007030              IMP             G       Glyma18g02210   GmMIPS1 gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma18g06950   GmFAD3-3        seed    PO:0009010              IMP             A       Glyma18g06950   FAD3-3  gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma19g35230   GmLPA1-2        seed    PO:0009010              IMP             A       Glyma19g35230   LPA1-2  gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma20g24530   GmFAD2-2        seed    PO:0009010              IMP             A       Glyma20g24530   FAD2-2  gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma20g25000   Ln      leaflet PO:0020049              IMP             A       Glyma20g25000   GmJagged1       gene    3847    20150717        Ethan Johnson\r
+SoyBase        Glyma20g25000   Ln      whole plant     PO:0000003              IMP             A       Glyma20g25000   GmJagged1       gene    3847    20150717        Ethan Johnson
\ No newline at end of file
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