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Updated the TAIR anatomy and temporal files by reassigning annotations
authorcooperl <cooperl@localhost>
Fri, 20 May 2011 19:06:43 +0000 (19:06 +0000)
committercooperl <cooperl@localhost>
Fri, 20 May 2011 19:06:43 +0000 (19:06 +0000)
to new terms from obsoleted ones.

svn path=/; revision=163

po-associations/po_anatomy_gene_arabidopsis_tair.assoc patch | blob | history
po-associations/po_temporal_gene_arabidopsis_tair.assoc patch | blob | history

diff --git a/po-associations/po_anatomy_gene_arabidopsis_tair.assoc b/po-associations/po_anatomy_gene_arabidopsis_tair.assoc
index c8a74e73371dcda29b0a27a2ec75cd608970f2ae..b19e32bab403d12d5a53b2135d158c585ddcc98c 100644 (file)
--- a/po-associations/po_anatomy_gene_arabidopsis_tair.assoc
+++ b/po-associations/po_anatomy_gene_arabidopsis_tair.assoc
@@ -344921,3 +344921,8 @@ TAIR  locus:2168666   CB5-E           PO:0009046      TAIR:Publication:1876|PMID:9880378      IEP             S       A
 TAIR   locus:2156534   CB5-D           PO:0009047      TAIR:Publication:1876|PMID:9880378      IEP             S       AT5G48810       AT5G48810|ATB5-B|B5 #3|ATCB5-D|CB5-D|ARABIDOPSIS CYTOCHROME B5 ISOFORM D|cytochrome B5 isoform D|K24G6.14|K24G6_14      protein taxon:3702      20060322        TAIR            TAIR:locus:2156534\r
 TAIR   locus:2168666   CB5-E           PO:0009047      TAIR:Publication:1876|PMID:9880378      IEP             S       AT5G53560       AT5G53560|ATB5-A|B5 #2|ATCB5-E|CB5-E|ARABIDOPSIS CYTOCHROME B5 ISOFORM E|cytochrome B5 isoform E|MNC6.10|MNC6_10        protein taxon:3702      20060322        TAIR            TAIR:locus:2168666\r
 TAIR   locus:2181246   NHX1            PO:0009025      TAIR:Publication:1791|PMID:9990049      IEP             S       AT5G27150       AT5G27150|NHX1|ATNHX|AT-NHX1|ATNHX1|Na+/H+ exchanger 1|T21B4.60|T21B4_60|NA(+)/H(+) ANTIPORTER  protein taxon:3702      20070802        TAIR            TAIR:locus:2181246\r
+TAIR   locus:2018259   ERS2            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT1G04310       AT1G04310|ERS2|ethylene response sensor 2|F19P19.25|F19P19_25|ERS2 PROTEIN      protein taxon:3702      20110130        TAIR            TAIR:locus:2018259\r
+TAIR   locus:2201552   ETR1            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT1G66340       AT1G66340|ETR1|EIN1|ETR|AtETR1|ETHYLENE RESPONSE 1|ETHYLENE INSENSITIVE 1|ETHYLENE RESPONSE|T27F4.9|T27F4_9|HISTIDINE KINASE ETR1       protein taxon:3702      20110130        TAIR            TAIR:locus:2201552\r
+TAIR   locus:2058500   ERS1            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT2G40940       AT2G40940|ERS1|ERS|ethylene response sensor 1|ETHYLENE RESPONSE SENSOR|T20B5.14|T20B5_14        protein taxon:3702      20110130        TAIR            TAIR:locus:2058500\r
+TAIR   locus:2084968   EIN4            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT3G04580       AT3G04580|EIN4|ETHYLENE INSENSITIVE 4|F7O18.5|F7O18_5   protein taxon:3702      20110130        TAIR            TAIR:locus:2084968\r
+TAIR   locus:2086208   ETR2            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT3G23150       AT3G23150|ETR2|ethylene response 2|K14B15.9     protein taxon:3702      20110130        TAIR            TAIR:locus:2086208\r
diff --git a/po-associations/po_temporal_gene_arabidopsis_tair.assoc b/po-associations/po_temporal_gene_arabidopsis_tair.assoc
index d63cc0bf9470628761f2e143f97fe21d0389807d..d86bb5bb20cecec39b7f05ac0cf0e8f4192c53f5 100644 (file)
--- a/po-associations/po_temporal_gene_arabidopsis_tair.assoc
+++ b/po-associations/po_temporal_gene_arabidopsis_tair.assoc
@@ -186491,8 +186491,3 @@ TAIR  locus:2090029   ABCC3           PO:0007131      TAIR:Publication:2319|PMID:9681016      IEP             G       A
 TAIR   locus:2196623   GA3OX1          PO:0007057      TAIR:Publication:1990|PMID:9836749      IDA             G       AT1G15550       AT1G15550|GA4|ATGA3OX1|GA3OX1|GA REQUIRING 4|ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1|gibberellin 3-oxidase 1|T16N11.6|T16N11_6|GIBBERELLIN 3 BETA-HYDROXYLASE     protein taxon:3702      20060612        TAIR            TAIR:locus:2196623\r
 TAIR   locus:2196623   GA3OX1          PO:0007131      TAIR:Publication:1990|PMID:9836749      IEP             G       AT1G15550       AT1G15550|GA4|ATGA3OX1|GA3OX1|GA REQUIRING 4|ARABIDOPSIS THALIANA GIBBERELLIN 3 BETA-HYDROXYLASE 1|gibberellin 3-oxidase 1|T16N11.6|T16N11_6|GIBBERELLIN 3 BETA-HYDROXYLASE     protein taxon:3702      20060612        TAIR            TAIR:locus:2196623\r
 TAIR   locus:2034205   GA3OX2          PO:0007131      TAIR:Publication:1990|PMID:9836749      IEP             G       AT1G80340       AT1G80340|GA4H|ATGA3OX2|GA3OX2|ARABIDOPSIS THALIANA GIBBERELLIN-3-OXIDASE 2|gibberellin 3-oxidase 2|F5I6.9|F5I6_9|GIBBERELLIN 3 BETA-HYDROXYLASE        protein taxon:3702      20060322        TAIR            TAIR:locus:2034205\r
-TAIR   locus:2018259   ERS2            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT1G04310       AT1G04310|ERS2|ethylene response sensor 2|F19P19.25|F19P19_25|ERS2 PROTEIN      protein taxon:3702      20110130        TAIR            TAIR:locus:2018259\r
-TAIR   locus:2201552   ETR1            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT1G66340       AT1G66340|ETR1|EIN1|ETR|AtETR1|ETHYLENE RESPONSE 1|ETHYLENE INSENSITIVE 1|ETHYLENE RESPONSE|T27F4.9|T27F4_9|HISTIDINE KINASE ETR1       protein taxon:3702      20110130        TAIR            TAIR:locus:2201552\r
-TAIR   locus:2058500   ERS1            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT2G40940       AT2G40940|ERS1|ERS|ethylene response sensor 1|ETHYLENE RESPONSE SENSOR|T20B5.14|T20B5_14        protein taxon:3702      20110130        TAIR            TAIR:locus:2058500\r
-TAIR   locus:2084968   EIN4            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT3G04580       AT3G04580|EIN4|ETHYLENE INSENSITIVE 4|F7O18.5|F7O18_5   protein taxon:3702      20110130        TAIR            TAIR:locus:2084968\r
-TAIR   locus:2086208   ETR2            PO:0000003      TAIR:Publication:501723448|PMID:19825542        IEP             G       AT3G23150       AT3G23150|ETR2|ethylene response 2|K14B15.9     protein taxon:3702      20110130        TAIR            TAIR:locus:2086208\r
Planteome associations