wip

svn path=/; revision=565

diff --git a/Personnel/preecej/python_singletons/incomparanoid.py b/Personnel/preecej/python_singletons/incomparanoid.py
index b9a3bbc180c5141e341f0657f31a68af1cac38e0..53408b702ca6d960d2de235889564279cbf1cece 100755 (executable)
--- a/Personnel/preecej/python_singletons/incomparanoid.py
+++ b/Personnel/preecej/python_singletons/incomparanoid.py
@@ -283,6 +283,8 @@ def write_reactome_files(dict_map, reactome_gene_protein_path, reactome_projecti
     """
     REACTOME_GENE_PROTEIN_OUT_FILE = open(os.getcwd() + reactome_projection_species + '_gene_protein_mapping.txt','w')
     for v in sorted(dict_map.values()) :
+        # TODO: iterate each values list for 1-to-many individual values
+        # need to make sure values are unique by putting in temp set as you print
         REACTOME_GENE_PROTEIN_OUT_FILE.write(v + "\t" + (projection_prefix if projection_prefix else "") + v) + "\n")
     REACTOME_GENE_PROTEIN_OUT_FILE.close()