update of associations from TAIR for Growth and Dev stages, total lines 397, updated...

svn path=/; revision=54

diff --git a/po-associations/po_temporal_gene_arabidopsis_tair.assoc b/po-associations/po_temporal_gene_arabidopsis_tair.assoc
index a1c221cfa151d1aa3560797ee95bd494b2e28618..bc785c07834cf7d0d4e23a09df79f3854bab9760 100644 (file)
--- a/po-associations/po_temporal_gene_arabidopsis_tair.assoc
+++ b/po-associations/po_temporal_gene_arabidopsis_tair.assoc
@@ -8,12 +8,16 @@ TAIR  gene:1005832590 TCP1            PO:0007602      TAIR:Publication:501680689|PMID:11470410        I
 TAIR   gene:1007966372 ULT1            PO:0007602      TAIR:Publication:501714549|PMID:15673576        IDA             G       ULTRAPETALA1    AT4G28190|ULTRAPETALA|ULTRAPETALA1|ULT  gene    taxon:3702      20060215        TAIR
 TAIR   gene:2827501    ULT2            PO:0007602      TAIR:Publication:501714549|PMID:15673576        IDA             G               F5H14.2|AT2G20825|F5H14_2|ULT2  gene    taxon:3702      20060215        TAIR
 TAIR   gene:1008491670 ROXY1           PO:0007602      TAIR:Publication:501714692|PMID:15728668        IDA             G               AT3G02000       gene    taxon:3702      20060215        TAIR
+TAIR   gene:1005898568 BAM1            PO:0001018      TAIR:Publication:501719476|PMID:16751349        IDA             G               AT5G65700       gene    taxon:3702      20060911        TAIR
+TAIR   gene:1005898569 BAM2            PO:0001018      TAIR:Publication:501719476|PMID:16751349        IDA             G               AT3G49670       gene    taxon:3702      20060911        TAIR
 TAIR   gene:1005203222 NAP             PO:0001026      TAIR:Publication:2767|PMID:9489703      IDA             G       NAC-LIKE, ACTIVATED BY AP3/PI   AT1G69490|NAC-LIKE, ACTIVATED BY AP3/PI gene    taxon:3702      20060215        TAIR
+TAIR   gene:1005898568 BAM1            PO:0001026      TAIR:Publication:501719476|PMID:16751349        IDA             G               AT5G65700       gene    taxon:3702      20060911        TAIR
+TAIR   gene:1005898569 BAM2            PO:0001026      TAIR:Publication:501719476|PMID:16751349        IDA             G               AT3G49670       gene    taxon:3702      20060911        TAIR
 TAIR   gene:1008492050 TUF             PO:0001007      TAIR:Publication:501714453|PMID:15610355        IDA             G       TUFF    VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 1|TUFF|VHA-E1|AT4G11150    gene    taxon:3702      20060215        TAIR
 TAIR   gene:2024526    VHA-E3          PO:0001007      TAIR:Publication:501714453|PMID:15610355        IDA             G       VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3  F22C12_4|VHA-E3|VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3|AT1G64200|F22C12.4       gene    taxon:3702      20060215        TAIR
 TAIR   gene:2077892    VHA-E2          PO:0001007      TAIR:Publication:501714453|PMID:15610355        IDA             G       VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2  AT3G08560|F17O14.3|VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 2|VHA-E2        gene    taxon:3702      20060215        TAIR
 TAIR   gene:1005964072 LTP12           PO:0001009      TAIR:Publication:501710265|AGRICOLA:IND23314018 IDA             G       LIPID TRANSFER PROTEIN 12       LIPID TRANSFER PROTEIN 12|AT3G51590     gene    taxon:3702      20060215        TAIR
-TAIR   gene:3715066    ATSTP2          PO:0001010      TAIR:Publication:1706|PMID:10074716     IDA             G               AT1G07340       gene    taxon:3702      20060215        TAIR
+TAIR   gene:3715066    ATSTP2          PO:0001010      TAIR:Publication:1706|PMID:10074716     IDA             G       SUGAR TRANSPORTER 2     SUGAR TRANSPORTER 2|STP2|AT1G07340      gene    taxon:3702      20060215        TAIR
 TAIR   gene:1005867684 SERK1           PO:0001010      TAIR:Publication:501718094|PMID:16284306        IDA             G       SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1    AT1G71830|ATSERK1|SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1  gene    taxon:3702      20060324        TAIR
 TAIR   gene:3713723    SERK2           PO:0001010      TAIR:Publication:501718094|PMID:16284306        IDA             G       SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2    AT1G34210|SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 2|ATSERK2  gene    taxon:3702      20060215        TAIR
 TAIR   gene:2035414    ATMGH3          PO:0001015      TAIR:Publication:501717968|PMID:16262706        IDA             G               MGH3|AT1G19890|F6F9_5|ATMGH3|F6F9.5     gene    taxon:3702      20060215        TAIR
@@ -34,7 +38,6 @@ TAIR  gene:1008491670 ROXY1           PO:0007607      TAIR:Publication:501714692|PMID:15728668
 TAIR   gene:3713665    JMT             PO:0007611      TAIR:Publication:501679469|PMID:11287667        IEP             G       JASMONIC ACID CARBOXYL METHYLTRANSFERASE        JASMONIC ACID CARBOXYL METHYLTRANSFERASE|AT1G19640      gene    taxon:3702      20060215        TAIR
 TAIR   gene:504952405  GRP16           PO:0007611      TAIR:Publication:5224|PMID:8220457      IEP             G               ATGRP-6|ATGRP16|AT5G07540       gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944702    ATDMC1          PO:0007611      TAIR:Publication:3500|PMID:9025299      IDA             G       RECA-LIKE GENE  DMC1|RECA-LIKE GENE|AT3G22880|ATDMC1|ARLIM15    gene    taxon:3702      20060215        TAIR
-TAIR   gene:504952405  GRP16           PO:0007611      TAIR:Publication:5224|PMID:8220457      IEP             G               ATGRP-6|ATGRP16|AT5G07540       gene    taxon:3702      20060215        TAIR
 TAIR   gene:504952406  GRP18           PO:0007611      TAIR:Publication:5224|PMID:8220457      IEP             G               ATGRP18|AT5G07520|ATGRP-8       gene    taxon:3702      20060215        TAIR
 TAIR   gene:3353821    SKP1            PO:0007611      TAIR:Publication:501710573|PMID:12970487        IDA             G       ARABIDOPSIS SKP1 HOMOLOGUE      SKP1A|UIP1|ASK1|UFO INTERACTING PROTEIN 1|ATSKP1|AT1G75950|ARABIDOPSIS SKP1 HOMOLOGUE   gene    taxon:3702      20060508        TAIR
 TAIR   gene:3714888    ASK2            PO:0007611      TAIR:Publication:501710573|PMID:12970487        IDA             G       ARABIDOPSIS SKP1-LIKE 2 SKP1B|ARABIDOPSIS SKP1-LIKE 2|AT5G42190 gene    taxon:3702      20060510        TAIR
@@ -51,10 +54,11 @@ TAIR        gene:3713665    JMT             PO:0007616      TAIR:Publication:501679469|PMID:11287667        IEP
 TAIR   gene:1944710    KNAT3           PO:0007616      TAIR:Publication:3312|PMID:9161040      IDA             G       KNOTTED1-LIKE HOMEOBOX GENE 3   AT5G25220|KNOTTED1-LIKE HOMEOBOX GENE 3|KNAT3 HOMEOBOX PROTEIN|KN1-LIKE ARABIDOPSIS THALIANA3   gene    taxon:3702      20060612        TAIR
 TAIR   gene:1944670    TSB2            PO:0001002      TAIR:Publication:5158|PMID:8278522      IDA             G       TRYPTOPHAN SYNTHASE BETA-SUBUNIT        TRYPTOPHAN SYNTHASE BETA-SUBUNIT|AT4G27070      gene    taxon:3702      20060215        TAIR
 TAIR   gene:3355320    MYB98           PO:0001052      TAIR:Publication:501717927|PMID:16214903        IDA             G               AT4G18770       gene    taxon:3702      20060215        TAIR
+TAIR   gene:2051798    ARL             PO:0001052      TAIR:Publication:501719259|PMID:16824178        IDA             G       ARGOS-LIKE      ARGOS-LIKE|ARL|F6E13.21|AT2G44080       gene    taxon:3702      20061026        TAIR
 TAIR   gene:3715134    CEL1            PO:0001053      TAIR:Publication:3093|PMID:9290636      IEP             G               AT1G70710       gene    taxon:3702      20060215        TAIR
-TAIR   gene:1005832149 AOC2            PO:0001054      TAIR:Publication:1547393|PMID:11891244  IEP             G       ALLENE OXIDE CYCLASE 2  AT3G25780|ALLENE OXIDE CYCLASE 2        gene    taxon:3702      20060215        TAIR
-TAIR   gene:1005837047 AOC1            PO:0001054      TAIR:Publication:1547393|PMID:11891244  IEP             G               AT3G25760       gene    taxon:3702      20060215        TAIR
-TAIR   gene:1005832151 AOC3            PO:0001054      TAIR:Publication:1547393|PMID:11891244  IEP             G               AT3G25770       gene    taxon:3702      20060215        TAIR
+TAIR   gene:1005832149 AOC3            PO:0001054      TAIR:Publication:1547393|PMID:11891244  IEP             G       ALLENE OXIDE CYCLASE 3  ALLENE OXIDE CYCLASE 3|AT3G25780        gene    taxon:3702      20060215        TAIR
+TAIR   gene:1005837047 AOC1            PO:0001054      TAIR:Publication:1547393|PMID:11891244  IEP             G       ALLENE OXIDE CYCLASE 1  ALLENE OXIDE CYCLASE 1|AT3G25760        gene    taxon:3702      20060215        TAIR
+TAIR   gene:1005832151 AOC2            PO:0001054      TAIR:Publication:1547393|PMID:11891244  IEP             G       ALLENE OXIDE CYCLASE 2  AT3G25770|ALLENE OXIDE CYCLASE 2        gene    taxon:3702      20060215        TAIR
 TAIR   gene:3713778    YLS9            PO:0001054      TAIR:Publication:501680282|PMID:11230571        IEP             G       YELLOW-LEAF-SPECIFIC GENE 9     YELLOW-LEAF-SPECIFIC GENE 9|NHL10|AT2G35980     gene    taxon:3702      20060215        TAIR
 TAIR   gene:2005458    ASP3            PO:0001054      TAIR:Publication:501680282|PMID:11230571        IEP             G       ASPARTATE AMINOTRANSFERASE 3    ASPARTATE AMINOTRANSFERASE, CHLOROPLAST PRECURSOR|YLS4|YELLOW-LEAF-SPECIFIC GENE 4|ASPARTATE AMINOTRANSFERASE 3|AT5G11520       gene    taxon:3702      20060215        TAIR
 TAIR   gene:3715776    SAG12           PO:0001054      TAIR:Publication:501714923|PMID:15743448        IDA             G       SENESCENCE-ASSOCIATED GENE 12   CI0010|AT5G45890|SENESCENCE-ASSOCIATED GENE 12  gene    taxon:3702      20060215        TAIR
@@ -68,6 +72,8 @@ TAIR  gene:1006154132 LACS7           PO:0001054      TAIR:Publication:501717822|PMID:16256065
 TAIR   gene:3353355    PEX7            PO:0001054      TAIR:Publication:501717822|PMID:16256065        IEP             G               PEROXISOMAL TARGETING SIGNAL TYPE 2 RECEPTOR|AT1G29260  gene    taxon:3702      20060508        TAIR
 TAIR   gene:3356300    PEX5            PO:0001054      TAIR:Publication:501717822|PMID:16256065        IEP             G               AT5G56290       gene    taxon:3702      20060509        TAIR
 TAIR   gene:1006154131 LACS6           PO:0001054      TAIR:Publication:501717822|PMID:16256065        IEP             G       LONG-CHAIN ACYL-COA SYNTHETASE 6        AT3G05970|LONG-CHAIN ACYL-COA SYNTHETASE 6      gene    taxon:3702      20060215        TAIR
+TAIR   gene:2151073    STP13           PO:0001054      TAIR:Publication:501718923|PMID:16616142        IEP             G               STP13|F9D12_17|F9D12.17|AT5G26340       gene    taxon:3702      20060927        TAIR
+TAIR   gene:3715366    LRP1            PO:0007511      TAIR:Publication:4385|PMID:7647564      IDA             G       LATERAL ROOT PRIMORDIUM 1       LATERAL ROOT PRIMORDIUM 1|AT5G12330     gene    taxon:3702      20060919        TAIR
 TAIR   gene:1008492050 TUF             PO:0001170      TAIR:Publication:501714453|PMID:15610355        IDA             G       TUFF    VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 1|TUFF|VHA-E1|AT4G11150    gene    taxon:3702      20060215        TAIR
 TAIR   gene:2024526    VHA-E3          PO:0001170      TAIR:Publication:501714453|PMID:15610355        IDA             G       VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3  F22C12_4|VHA-E3|VACUOLAR H+-ATPASE SUBUNIT E ISOFORM 3|AT1G64200|F22C12.4       gene    taxon:3702      20060215        TAIR
 TAIR   gene:3716113    WRI1            PO:0001170      TAIR:Publication:501714205|PMID:15500472        IEP             G       WRINKLED 1      AT3G54320|ASML1|WRINKLED 1|WRI  gene    taxon:3702      20060503        TAIR
@@ -92,16 +98,18 @@ TAIR        gene:3704422    ABF3            PO:0001040      TAIR:Publication:501718566|PMID:16463099        IEP
 TAIR   gene:3356496    ABF2            PO:0001040      TAIR:Publication:501718566|PMID:16463099        IEP             G       ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2      AT1G45249|ABA-RESPONSIVE ELEMENT BINDING PROTEIN 1|ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING PROTEIN 2|AREB1|ABSCISIC ACID RESPONSIVE ELEMENTS-BINDING FACTOR 2 gene    taxon:3702      20060609        TAIR
 TAIR   gene:1005832584 ABF4            PO:0001040      TAIR:Publication:501718566|PMID:16463099        IEP             G       ABRE BINDING FACTOR 4   AREB2|AT3G19290|ABA-RESPONSIVE ELEMENT BINDING PROTEIN 2|ABRE BINDING FACTOR 4  gene    taxon:3702      20060609        TAIR
 TAIR   gene:2156661    LTI78           PO:0001040      TAIR:Publication:501718566|PMID:16463099        IEP             G               RD29A|LTI78|K24M7.4|K24M7_4|AT5G52310   gene    taxon:3702      20060411        TAIR
+TAIR   gene:2116489    ATPANK2         PO:0001040      TAIR:Publication:501719778|PMID:16897480        IEP             G       PANTOTHENATE KINASE 2   F10M6.180|ATPANK2|AT4G32180|PANTOTHENATE KINASE 2|F10M6_180     gene    taxon:3702      20061009        TAIR
+TAIR   gene:2195637    ATCOAA          PO:0001040      TAIR:Publication:501719778|PMID:16897480        IEP             G       PANTOTHENATE KINASE 1   T13D8.31|PANTOTHENATE KINASE 1|ATPANK1|ATCOAA|T13D8_31|AT1G60440        gene    taxon:3702      20061009        TAIR
 TAIR   gene:1005867684 SERK1           PO:0007631      TAIR:Publication:1546032|PMID:11706164  IEP             G       SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1    AT1G71830|ATSERK1|SOMATIC EMBRYOGENESIS RECEPTOR-LIKE KINASE 1  gene    taxon:3702      20060324        TAIR
 TAIR   gene:3355916    ECR1            PO:0007631      TAIR:Publication:1547263|PMID:11884684  IDA             G       E1 C-TERMINAL RELATED 1 AT5G19180|E1 C-TERMINAL RELATED 1       gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944464    ACL5            PO:0007631      TAIR:Publication:501716432|PMID:15894745        IDA             G       ACAULIS 5       ACAULIS 5|AT5G19530|SPERMINE SYNTHASE   gene    taxon:3702      20060215        TAIR
 TAIR   gene:2051843    OEP37           PO:0007631      TAIR:Publication:501718876|PMID:16624824        IEP             G               F6E13.8|AT2G43950|OEP37 gene    taxon:3702      20060515        TAIR
+TAIR   gene:1945154    HBT             PO:0007631      TAIR:Publication:501682689|PMID:12368267        IDA             G       HOBBIT  AT2G20000|HOBBIT        gene    taxon:3702      20060920        TAIR
 TAIR   gene:3355334    ATML1           PO:0001180      TAIR:Publication:3555|PMID:8989876      IDA             G       MERISTEM LAYER 1        AT4G21750|MERISTEM LAYER 1      gene    taxon:3702      20060215        TAIR
 TAIR   gene:3715532    PDF2            PO:0001180      TAIR:Publication:501683077|PMID:12505995        IDA             G       PROTODERMAL FACTOR2     PROTODERMAL FACTOR2|AT4G04890   gene    taxon:3702      20060215        TAIR
 TAIR   gene:1007966372 ULT1            PO:0001180      TAIR:Publication:501714549|PMID:15673576        IDA             G       ULTRAPETALA1    AT4G28190|ULTRAPETALA|ULTRAPETALA1|ULT  gene    taxon:3702      20060215        TAIR
 TAIR   gene:2827501    ULT2            PO:0001180      TAIR:Publication:501714549|PMID:15673576        IDA             G               F5H14.2|AT2G20825|F5H14_2|ULT2  gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944571    LEC1            PO:0001180      TAIR:Publication:2434|PMID:9657152      IDA             G       LEAFY COTYLEDON 1       LEAFY COTYLEDON 1|EMB 212|EMB212|AT1G21970      gene    taxon:3702      20060215        TAIR
-TAIR   gene:3355334    ATML1           PO:0001180      TAIR:Publication:3555|PMID:8989876      IDA             G       MERISTEM LAYER 1        AT4G21750|MERISTEM LAYER 1      gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944571    LEC1            PO:0001180      TAIR:Publication:2434|PMID:9657152      NAS             G       LEAFY COTYLEDON 1       LEAFY COTYLEDON 1|EMB 212|EMB212|AT1G21970      gene    taxon:3702      20060215        TAIR
 TAIR   gene:3713657    GRH1            PO:0001180      TAIR:Publication:501718824|PMID:15992545        IEP             G       GRR1-LIKE PROTEIN 1     AT4G03190|ATGER1|ATFBL18|ATGRH1|AFB1|AUXIN SIGNALING F BOX PROTEIN 1|GRR1-LIKE PROTEIN 1        gene    taxon:3702      20060510        TAIR
 TAIR   gene:3355334    ATML1           PO:0001185      TAIR:Publication:3555|PMID:8989876      IDA             G       MERISTEM LAYER 1        AT4G21750|MERISTEM LAYER 1      gene    taxon:3702      20060215        TAIR
@@ -133,10 +141,7 @@ TAIR       gene:2205019    CUL3B           PO:0004507      TAIR:Publication:501717365|PMID:16045478        IDA
 TAIR   gene:3435278    CUL3A           PO:0004507      TAIR:Publication:501717365|PMID:16045478        IDA             G               AT1G26830|CUL3A|CUL3|ATCUL3|ATCUL3A|T24P13.25   gene    taxon:3702      20060510        TAIR
 TAIR   gene:1945199    LEC2            PO:0004507      TAIR:Publication:501680563|PMID:11573014        IEP             G       LEAFY COTYLEDON 2       AT1G28300|LEAFY COTYLEDON 2     gene    taxon:3702      20060215        TAIR
 TAIR   gene:2123868    EMB2757         PO:0004507      TAIR:Publication:501717567|PMID:16113228        IDA             G       EMBRYO DEFECTIVE 2757   F27B13_100|AT4G29860|F27B13.100|TANMEI/EMB2757|TAN|EMBRYO DEFECTIVE 2757|EMB2757        gene    taxon:3702      20060215        TAIR
-TAIR   gene:1007966372 ULT1            PO:0004507      TAIR:Publication:501714549|PMID:15673576        IDA             G       ULTRAPETALA1    AT4G28190|ULTRAPETALA|ULTRAPETALA1|ULT  gene    taxon:3702      20060215        TAIR
-TAIR   gene:2827501    ULT2            PO:0004507      TAIR:Publication:501714549|PMID:15673576        IDA             G               F5H14.2|AT2G20825|F5H14_2|ULT2  gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944571    LEC1            PO:0004507      TAIR:Publication:2434|PMID:9657152      IDA             G       LEAFY COTYLEDON 1       LEAFY COTYLEDON 1|EMB 212|EMB212|AT1G21970      gene    taxon:3702      20060215        TAIR
-TAIR   gene:1944550    FUS3            PO:0004507      TAIR:Publication:501713202|PMID:15363412        IEP             G       FUSCA 3 AT3G26790|FUSCA 3|FUS3  gene    taxon:3702      20060215        TAIR
 TAIR   gene:504952442  WRKY10          PO:0004507      TAIR:Publication:501718060|PMID:16293693        IDA             G       MINISEED3       WRKY10|ATWRKY10|AT1G55600|MINISEED3|MINI3       gene    taxon:3702      20060215        TAIR
 TAIR   gene:2090349    TEL1            PO:0004507      TAIR:Publication:501713238|PMID:15356386        IDA             G       TERMINAL EAR1-LIKE 1    TEL1|AT3G26120|TERMINAL EAR1-LIKE 1|MJL14.2     gene    taxon:3702      20060403        TAIR
 TAIR   gene:2008529    TEL2            PO:0004507      TAIR:Publication:501713238|PMID:15356386        IDA             G       TERMINAL EAR1-LIKE 2    F12A21.10|F12A21_10|AT1G67770|TERMINAL EAR1-LIKE 2|TEL2 gene    taxon:3702      20060403        TAIR
@@ -148,7 +153,6 @@ TAIR        gene:1007965266 AML5            PO:0004507      TAIR:Publication:501713238|PMID:15356386        I
 TAIR   gene:3713657    GRH1            PO:0004507      TAIR:Publication:501718824|PMID:15992545        IEP             G       GRR1-LIKE PROTEIN 1     AT4G03190|ATGER1|ATFBL18|ATGRH1|AFB1|AUXIN SIGNALING F BOX PROTEIN 1|GRR1-LIKE PROTEIN 1        gene    taxon:3702      20060510        TAIR
 TAIR   gene:2130134    ATOEP16-2               PO:0004507      TAIR:Publication:501719067|PMID:16709189        IDA             G               ATOEP16-2|FCAALL.207|ATOEP16-S|DL4120W|AT4G16160        gene    taxon:3702      20060620        TAIR
 TAIR   gene:3685795    ATHD1           PO:0004507      TAIR:Publication:501719447|PMID:16763149        IDA             G               HDA19|ATHD1|ATRPD3A|HISTONE DEACETYLASE|AT4G38130|HDA1|RPD3A    gene    taxon:3702      20060809        TAIR
-TAIR   gene:1944550    FUS3            PO:0001078      TAIR:Publication:501713202|PMID:15363412        IEP             G       FUSCA 3 AT3G26790|FUSCA 3|FUS3  gene    taxon:3702      20060215        TAIR
 TAIR   gene:1945199    LEC2            PO:0001078      TAIR:Publication:501680563|PMID:11573014        IEP             G       LEAFY COTYLEDON 2       AT1G28300|LEAFY COTYLEDON 2     gene    taxon:3702      20060215        TAIR
 TAIR   gene:2123868    EMB2757         PO:0001078      TAIR:Publication:501717567|PMID:16113228        IDA             G       EMBRYO DEFECTIVE 2757   F27B13_100|AT4G29860|F27B13.100|TANMEI/EMB2757|TAN|EMBRYO DEFECTIVE 2757|EMB2757        gene    taxon:3702      20060215        TAIR
 TAIR   gene:3353614    BAN             PO:0001078      TAIR:Publication:3431|PMID:9076994      IEP             G       BANYULS AT1G61720|BANYULS       gene    taxon:3702      20060215        TAIR
@@ -159,7 +163,6 @@ TAIR        gene:2827501    ULT2            PO:0001078      TAIR:Publication:501714549|PMID:15673576        IDA
 TAIR   gene:1005837015 DEK1            PO:0001078      TAIR:Publication:501714487|PMID:15647902        IDA             G               ATDEK1|DEFECTIVE KERNEL 1|AT1G55350     gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944571    LEC1            PO:0001078      TAIR:Publication:2434|PMID:9657152      IDA             G       LEAFY COTYLEDON 1       LEAFY COTYLEDON 1|EMB 212|EMB212|AT1G21970      gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944550    FUS3            PO:0001078      TAIR:Publication:501713202|PMID:15363412        IEP             G       FUSCA 3 AT3G26790|FUSCA 3|FUS3  gene    taxon:3702      20060215        TAIR
-TAIR   gene:1945199    LEC2            PO:0001078      TAIR:Publication:501680563|PMID:11573014        IEP             G       LEAFY COTYLEDON 2       AT1G28300|LEAFY COTYLEDON 2     gene    taxon:3702      20060215        TAIR
 TAIR   gene:2090349    TEL1            PO:0001078      TAIR:Publication:501713238|PMID:15356386        IDA             G       TERMINAL EAR1-LIKE 1    TEL1|AT3G26120|TERMINAL EAR1-LIKE 1|MJL14.2     gene    taxon:3702      20060403        TAIR
 TAIR   gene:2008529    TEL2            PO:0001078      TAIR:Publication:501713238|PMID:15356386        IDA             G       TERMINAL EAR1-LIKE 2    F12A21.10|F12A21_10|AT1G67770|TERMINAL EAR1-LIKE 2|TEL2 gene    taxon:3702      20060403        TAIR
 TAIR   gene:3354362    AML2            PO:0001078      TAIR:Publication:501713238|PMID:15356386        IDA             G               AT2G42890       gene    taxon:3702      20060519        TAIR
@@ -180,6 +183,7 @@ TAIR        gene:2150644    SDP1            PO:0007632      TAIR:Publication:501718546|PMID:16473965        IEP
 TAIR   gene:3713573    ATIPT2          PO:0007134      TAIR:Publication:501681454|PMID:11999372        IEP             G       TRNA ISOPENTENYLTRANSFERASE     TRNA ISOPENTENYLTRANSFERASE|AT2G27760|IPPT      gene    taxon:3702      20060215        TAIR
 TAIR   gene:2827501    ULT2            PO:0007134      TAIR:Publication:501714549|PMID:15673576        IDA             G               F5H14.2|AT2G20825|F5H14_2|ULT2  gene    taxon:3702      20060215        TAIR
 TAIR   gene:1008081926 VGD1            PO:0007134      TAIR:Publication:501714481|PMID:15659637        NAS             G       VANGUARD1       VANGUARD1|AT2G47040     gene    taxon:3702      20060215        TAIR
+TAIR   gene:1944719    ABI5            PO:0007134      TAIR:Publication:531|PMID:10760247      IEP             G       ABA INSENSITIVE 5       EEL|ABA INSENSITIVE 5|AT2G36270|GIA1    gene    taxon:3702      20060913        TAIR
 TAIR   gene:3353284    COX6B           PO:0007057      TAIR:Publication:501680213|PMID:11434463        IEP             G       CYTOCHROME C OXIDASE 6B CYTOCHROME C OXIDASE 6B|SUBUNIT 6B OF CYTOCHROME C OXIDASE|AT1G22450|ATCOX6B2   gene    taxon:3702      20060215        TAIR
 TAIR   gene:1005835143 LACS9           PO:0007057      TAIR:Publication:501681782|PMID:12177484        IEP             G       LONG CHAIN ACYL-COA SYNTHETASE 9        LONG CHAIN ACYL-COA SYNTHETASE 9|AT1G77590      gene    taxon:3702      20060215        TAIR
 TAIR   gene:3714838    AHB1            PO:0007057      TAIR:Publication:501706608|AGRICOLA:IND23288995 IDA             G               AT2G16060|ATGLB1|ARATH GLB1|NSHB1|HEMOGLOBIN|GLB1       gene    taxon:3702      20060215        TAIR
@@ -194,10 +198,11 @@ TAIR      gene:1005832111 SDH2-1          PO:0007057      TAIR:Publication:501717832|PMID:16249327
 TAIR   gene:1005832192 SDH2-3          PO:0007057      TAIR:Publication:501717832|PMID:16249327        IEP             G               AT5G65165       gene    taxon:3702      20060322        TAIR
 TAIR   gene:2080786    ATPP2CA         PO:0007057      TAIR:Publication:501718262|PMID:16339800        IEP             G               AT3G11410|ATPP2CA|AHG3|F24K9.8  gene    taxon:3702      20060503        TAIR
 TAIR   gene:1944454    ABI1            PO:0007057      TAIR:Publication:501718262|PMID:16339800        IEP             G       ABA INSENSITIVE 1       ABA INSENSITIVE 1|PROTEIN PHOSPHATASE 2C ABI1|ABSCISIC ACID INSENSITIVE 1|AT4G26080     gene    taxon:3702      20060718        TAIR
-TAIR   gene:1005898758 HAB1            PO:0007057      TAIR:Publication:501718262|PMID:16339800        IEP             G               HOMOLOGY TO ABI1|AT1G72770      gene    taxon:3702      20060215        TAIR
+TAIR   gene:1005898758 HAB1            PO:0007057      TAIR:Publication:501718262|PMID:16339800        IEP             G       HOMOLOGY TO ABI1        HOMOLOGY TO ABI1|AT1G72770      gene    taxon:3702      20060215        TAIR
 TAIR   gene:1006154130 HAB2            PO:0007057      TAIR:Publication:501718262|PMID:16339800        IEP             G               AT1G17550       gene    taxon:3702      20060215        TAIR
 TAIR   gene:2159067    LEP             PO:0007057      TAIR:Publication:501718256|PMID:16339853        IEP             G       LEAFY PETIOLE   MAC12.13|AT5G13910|MAC12_13|LEAFY PETIOLE|LEP   gene    taxon:3702      20060413        TAIR
 TAIR   gene:2051843    OEP37           PO:0007057      TAIR:Publication:501718876|PMID:16624824        IEP             G               F6E13.8|AT2G43950|OEP37 gene    taxon:3702      20060515        TAIR
+TAIR   gene:3356479    SHI             PO:0007057      TAIR:Publication:1546025|PMID:11706176  IDA             G       SHORT INTERNODES        SHORT INTERNODES|AT5G66350      gene    taxon:3702      20060919        TAIR
 TAIR   gene:3354348    PP2A-3          PO:0007131      TAIR:Publication:5016|PMID:8292782      IEP             G       PROTEIN PHOSPHATASE 2A-3        SER/THR PROTEIN PHOSPHATASE|PROTEIN PHOSPHATASE 2A-3|AT3G58500|EP7      gene    taxon:3702      20060215        TAIR
 TAIR   gene:504954323  EXGT-A1         PO:0007131      TAIR:Publication:1028|PMID:10557219     IEP             G       ENDO-XYLOGLUCAN TRANSFERASE     ENDOXYLOGLUCAN TRANSFERASE|AT2G06850|EXT|ENDO-XYLOGLUCAN TRANSFERASE    gene    taxon:3702      20060215        TAIR
 TAIR   gene:1944562    HLS1            PO:0007131      TAIR:Publication:3930|PMID:8612271      IEP             G       HOOKLESS 1      UNS2|AT4G37580|HOOKLESS 1|COP3|CONSTITUTIVE PHOTOMORPHOGENIC 3  gene    taxon:3702      20060215        TAIR
@@ -301,8 +306,8 @@ TAIR        gene:1005832111 SDH2-1          PO:0007131      TAIR:Publication:501717832|PMID:16249327
 TAIR   gene:1005832191 SDH2-2          PO:0007131      TAIR:Publication:501717832|PMID:16249327        IEP             G               AT5G40650       gene    taxon:3702      20060322        TAIR
 TAIR   gene:2019189    MIF1            PO:0007131      TAIR:Publication:501718397|PMID:16412086        IEP             G       MINI ZINC FINGER 1      F1M20.34|F1M20_34|MINI ZINC FINGER 1|MIF1|AT1G74660     gene    taxon:3702      20060215        TAIR
 TAIR   gene:1009390666 MIF3            PO:0007131      TAIR:Publication:501718397|PMID:16412086        IEP             G       MINI ZINC FINGER  3     MINI ZINC FINGER  3|MIF3        gene    taxon:3702      20060215        TAIR
-TAIR   gene:1944527    DWF4            PO:0007131      TAIR:Publication:501718411|PMID:16407451        IEP             G       DWARF 4 CLAM|DWF4|CYP90B1|CLM|AT3G50660|DWARF 4|STEROID 22-ALPHA-HYDROXYLASE    gene    taxon:3702      20060308        TAIR
-TAIR   gene:1944527    DWF4            PO:0007131      TAIR:Publication:501718411|PMID:16407451        IDA             G       DWARF 4 CLAM|DWF4|CYP90B1|CLM|AT3G50660|DWARF 4|STEROID 22-ALPHA-HYDROXYLASE    gene    taxon:3702      20060308        TAIR
+TAIR   gene:1944527    DWF4            PO:0007131      TAIR:Publication:501718411|PMID:16407451        IEP             G       DWARF 4 CLAM|DWF4|SUPPRESSOR OF NPH4|CYP90B1|CLM|AT3G50660|SNP2|DWARF 4|STEROID 22-ALPHA-HYDROXYLASE    gene    taxon:3702      20060308        TAIR
+TAIR   gene:1944527    DWF4            PO:0007131      TAIR:Publication:501718411|PMID:16407451        IDA             G       DWARF 4 CLAM|DWF4|SUPPRESSOR OF NPH4|CYP90B1|CLM|AT3G50660|SNP2|DWARF 4|STEROID 22-ALPHA-HYDROXYLASE    gene    taxon:3702      20060308        TAIR
 TAIR   gene:3440351    MVK             PO:0007131      TAIR:Publication:465|PMID:10794536      IEP             G               F21A20_160|MEVALONATE KINASE|F21A20.160|ATP:MEVALONATE PHOSPHOTRANSFERASE|MVK|AT5G27450|MK      gene    taxon:3702      20060308        TAIR
 TAIR   gene:3353836    HMG1            PO:0007131      TAIR:Publication:4943|PMID:8302869      IEP             G       3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE        HMG-COA REDUCTASE|HMGR1|AT1G76490|3-HYDROXY-3-METHYLGLUTARYL COA REDUCTASE      gene    taxon:3702      20060308        TAIR
 TAIR   gene:3715307    HMG2            PO:0007131      TAIR:Publication:4943|PMID:8302869      IEP             G               AT2G17370       gene    taxon:3702      20060308        TAIR
@@ -355,6 +360,10 @@ TAIR       gene:3685548    CORI1           PO:0007131      TAIR:Publication:2659|PMID:9501136      IEP             G       CO
 TAIR   gene:2076095    GR-RBP4         PO:0007131      TAIR:Publication:501717944|PMID:16207746        IEP             G               GR-RBP4|F14O13.2|AT3G23830      gene    taxon:3702      20060609        TAIR
 TAIR   gene:2179370    AT5G64440               PO:0007131      TAIR:Publication:501719534|PMID:16880402        IEP             G               AT5G64440|T12B11_3|T12B11.3     gene    taxon:3702      20060817        TAIR
 TAIR   gene:2179370    AT5G64440               PO:0007131      TAIR:Publication:501719534|PMID:16880402        IDA             G               AT5G64440|T12B11_3|T12B11.3     gene    taxon:3702      20060817        TAIR
+TAIR   gene:1944460    ABI4            PO:0007131      TAIR:Publication:2481|PMID:9634591      IEP             G       ABA INSENSITIVE 4       SUGAR-INSENSITIVE 5|SIS5|SUCROSE UNCOUPLED 6|GLUCOSE INSENSITIVE 6|GIN6|ABSCISIC ACID-INSENSITIVE PROTEIN 4|AT2G40220|ISI3|SUN6|IMPAIRED SUCROSE INDUCTION 3|SAN5|SALOBRENO 5|ABA INSENSITIVE 4|SUCROSE UNCOUPLED-6     gene    taxon:3702      20060913        TAIR
+TAIR   gene:3698438    UGT72E1         PO:0007131      TAIR:Publication:501719879|PMID:16995900        IEP             G               AT3G50740|F18B3.20|UGT72E1      gene    taxon:3702      20061005        TAIR
+TAIR   gene:2173663    AT5G66690.1             PO:0007131      TAIR:Publication:501719879|PMID:16995900        IEP             G               MSN2.8|UGT72E2|MSN2_8|AT5G66690 gene    taxon:3702      20061005        TAIR
+TAIR   gene:2151058    AT5G26310.1             PO:0007131      TAIR:Publication:501719879|PMID:16995900        IEP             G               AT5G26310|UGT72E3|F9D12.4|F9D12_4       gene    taxon:3702      20061005        TAIR
 TAIR   gene:3715028    ATPRP2          PO:0007098      TAIR:Publication:918|PMID:10594096      IDA             G       PROLINE-RICH PROTEIN 2  AT2G21140|PROLINE-RICH PROTEIN 2        gene    taxon:3702      20060215        TAIR
 TAIR   gene:3715030    PRP4            PO:0007098      TAIR:Publication:918|PMID:10594096      IDA             G       PROLINE-RICH PROTEIN 4  PROLINE-RICH PROTEIN 4|ATPRP4|AT4G38770 gene    taxon:3702      20060215        TAIR
 TAIR   gene:2149523    YUCCA5          PO:0007081      TAIR:Publication:501717525|PMID:16126863        IEP             G       SUPPRESSOR OF ER1       F6B6.3|AT5G43890|SUPPRESSOR OF ER1|YUCCA5|SUPER1|F6B6_3 gene    taxon:3702      20060215        TAIR