Removed associations to obsoleted terms

svn path=/; revision=334

diff --git a/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc b/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc
index 77ec8fae157468da7341ec6b7851dde02e1658b8..cd9f3568fda81a208b9aec83cba2c4ed433a8fb0 100644 (file)
--- a/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc
+++ b/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc
@@ -3,7 +3,6 @@ SGN_gene        4502    CYP82E4v2               PO:0009025      PMID:16192354   IEP     NCBI_gi:74475185        A       CYP82E4
 SGN_gene       6727    pmt3            PO:0009005      PMID:10965939   IEP     NCBI_gi:9453833 A       putrescine N-methyltransferase 3        NtPMT3  gene    taxon:4085      20090630        SGN             
 SGN_gene       6728    pmt1            PO:0009005      PMID:10598105   IEP     NCBI_gi:6523838 A       putrescine N-methyltransferase 1        NtPMT1a gene    taxon:4085      20090626        SGN             
 SGN_gene       6729    pmt             PO:0009005      PMID:10598105   IEP     NCBI_gi:9957223 A       putrescine N-Methyltransferase          gene    taxon:4085      20090626        SGN             
-SGN_gene       6870    NtCP56          PO:0020091      PMID:19246592   IEP     NCBI_gi:172052259       A       cysteine protease 2             gene    taxon:4085      20090817        SGN             
 SGN_gene       6886    CN              PO:0006340      PMID:19191020   IEP     NCBI_gi:126571550       A       TMV resistance protein N (CN)   N       gene    taxon:4085      20090216        SGN             
 SGN_gene       7240    A622            PO:0000025      PMID:12369619   IEP     NCBI_gi:18149186        A       isoflavone reductase    A622    gene    taxon:4085      20090626        SGN             
 SGN_gene       7256    rsg             PO:0009047      PMID:10852936   IEP     NCBI_gi:8777511 A       bZIP transcriptional activator          gene    taxon:4085      20090730        SGN             

diff --git a/po-associations/po_anatomy_gene_Petunia_sgn.assoc b/po-associations/po_anatomy_gene_Petunia_sgn.assoc
index c9fdeb1888d563ae1fbd8656d56f0fee4262e56b..d8b1ffe353942ffaa473d7b4ec3efbc2c79c7151 100644 (file)
--- a/po-associations/po_anatomy_gene_Petunia_sgn.assoc
+++ b/po-associations/po_anatomy_gene_Petunia_sgn.assoc
@@ -23,7 +23,6 @@ SGN_gene      8298    MAW             PO:0009032      PMID:19717616   IEP             A       MAEWEST         gene    taxon:4101      2009
 SGN_gene       8298    MAW             PO:0000021      PMID:19717616   IMP             A       MAEWEST         gene    taxon:4101      20091023        SGN             
 SGN_gene       8298    MAW             PO:0000017      PMID:19717616   IEP             A       MAEWEST         gene    taxon:4101      20091023        SGN             
 SGN_gene       8298    MAW             PO:0005647      PMID:19717616   IMP             A       MAEWEST         gene    taxon:4101      20091023        SGN             
-SGN_gene       8298    MAW             PO:0004706      PMID:19717616   IEP             A       MAEWEST         gene    taxon:4101      20091023        SGN             
 SGN_gene       8298    MAW             PO:0004705      PMID:19717616   IEP             A       MAEWEST         gene    taxon:4101      20091023        SGN             
 SGN_gene       8299    CHSU            PO:0009032      PMID:19717616   IMP             A       CHORIPETALA SUZANNE             gene    taxon:4101      20091023        SGN             
 SGN_gene       8299    CHSU            PO:0009062      PMID:19717616   IMP             A       CHORIPETALA SUZANNE             gene    taxon:4101      20091023        SGN             

diff --git a/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc b/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc
index ddb8f2783c9c973a624e6a7646c6e7e07a4c578d..6bd3937fe0acdc8859c89cf4942d03c3cf5ecacb 100644 (file)
--- a/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc
+++ b/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc
@@ -22,7 +22,6 @@ SGN_gene      88      ao2             PO:0009001      PMID:11018259   IEP             A       aldehyde oxidase 2      TAO2|AO2|Sol
 SGN_gene       88      ao2             PO:0009006      PMID:11018259   IEP             A       aldehyde oxidase 2      TAO2|AO2|Solyc01g088170 gene    taxon:4081      20080612        SGN             
 SGN_gene       128     an              PO:0009049      SGN_ref:861     IMP             A       anantha an^1|an^2|ca|Solyc02g081670     gene    taxon:4081      20071016        SGN             
 SGN_gene       153     arg1            PO:0009005      PMID:15322128   IEP     NCBI_gi:54648779        A       arginase 1      LeARG1|ARG1|Solyc01g091160      gene    taxon:4081      20090723        SGN             
-SGN_gene       370     hsp17d4         PO:0020091      PMID:19854799   IEP             A       cytosolic class II small heat shock protein HCT2 (HSP17.4)      HSP17.4 gene    taxon:4081      20100312        SGN             
 SGN_gene       370     hsp17d4         PO:0009046      PMID:19854799   IEP             A       cytosolic class II small heat shock protein HCT2 (HSP17.4)      HSP17.4 gene    taxon:4081      20100312        SGN             
 SGN_gene       370     hsp17d4         PO:0009025      PMID:19854799   IEP             A       cytosolic class II small heat shock protein HCT2 (HSP17.4)      HSP17.4 gene    taxon:4081      20100312        SGN             
 SGN_gene       370     hsp17d4         PO:0009066      PMID:19854799   IEP             A       cytosolic class II small heat shock protein HCT2 (HSP17.4)      HSP17.4 gene    taxon:4081      20100312        SGN             

diff --git a/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc b/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc
index 7ff58f188bc380b52bc311bb3920e70d817a9f91..839d3567ffbd69e34dbce93f5477c88b5dc811b7 100644 (file)
--- a/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc
+++ b/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc
@@ -10,6 +10,5 @@ SGN_gene      1848    sus4            PO:0004543      PMID:2964386    IEP     NCBI_gi:169571  A       sucrose synthas
 SGN_gene       1898    RFP1            PO:0009008      PMID:20042252   IEP     NCBI_gi:118490012       A       RING-H2 finger protein gene 1   EF091877|StRFP1 gene    taxon:4113      20100426        SGN             
 SGN_gene       1974    pmt             PO:0004543      PMID:16088399   IEP     NCBI_gi:38174782        A       putrescine N-methyltransferase          gene    taxon:4113      20090625        SGN             
 SGN_gene       1975    spdsy           PO:0000003      PMID:16088399   IEP     NCBI_gi:15150054        A       spermidine synthase     SpdSy   gene    taxon:4113      20090625        SGN             
-SGN_gene       1976    CP100           PO:0006345      PMID:9106515    IEP     NCBI_gi:1030067 A       isoflavone reductase    X92075  gene    taxon:4113      20091211        SGN             
 SGN_gene       1976    CP100           PO:0009062      PMID:9106515    IEP     NCBI_gi:1030067 A       isoflavone reductase    X92075  gene    taxon:4113      20091211        SGN             
 SGN_gene       2422    bel5            PO:0004543      PMID:17921341   IEP             A       BEL1-related homeotic protein 5 Bel5|StBel5     gene    taxon:4113      20080124        SGN             

diff --git a/po-associations/po_anatomy_gene_arabidopsis_tair.assoc b/po-associations/po_anatomy_gene_arabidopsis_tair.assoc
index a39962601e99ad2d706b8d3ad3f32481fa0812e8..9f98bd7a83ba70ee2ae7396854f4f516c79f9e2d 100644 (file)
--- a/po-associations/po_anatomy_gene_arabidopsis_tair.assoc
+++ b/po-associations/po_anatomy_gene_arabidopsis_tair.assoc
@@ -523,7 +523,6 @@ TAIR        locus:2074587   COL2            PO:0009047      TAIR:Publication:501680195|PMID:11359606        IEP
 TAIR   locus:2133950   IRT2            PO:0006036      TAIR:Publication:501680206|PMID:11389759        IEP             S       AT4G19680       AT4G19680|IRT2|ATIRT2|iron regulated transporter 2|T16H5.40|T16H5_40    protein taxon:3702      20031011        TAIR            TAIR:locus:2133950
 TAIR   locus:2171427   KAN             PO:0000015      TAIR:Publication:501680717|PMID:11395775        IDA             S       AT5G16560       AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31      protein taxon:3702      20081007        TAIR            TAIR:locus:2171427
 TAIR   locus:2171427   KAN             PO:0004703      TAIR:Publication:501680717|PMID:11395775        IDA             S       AT5G16560       AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31      protein taxon:3702      20081008        TAIR            TAIR:locus:2171427
-TAIR   locus:2171427   KAN             PO:0004706      TAIR:Publication:501680717|PMID:11395775        IDA             S       AT5G16560       AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31      protein taxon:3702      20081008        TAIR            TAIR:locus:2171427
 TAIR   locus:2171427   KAN             PO:0009009      TAIR:Publication:501680717|PMID:11395775        IDA             S       AT5G16560       AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31      protein taxon:3702      20081007        TAIR            TAIR:locus:2171427
 TAIR   locus:2171427   KAN             PO:0009035      TAIR:Publication:501680717|PMID:11395775        IDA             S       AT5G16560       AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31      protein taxon:3702      20081008        TAIR            TAIR:locus:2171427
 TAIR   locus:2009061   IP5PI           PO:0000013      TAIR:Publication:501680756|PMID:11402208        IEP             S       AT1G34120       AT1G34120|IP5PI|AT5P1|ATIP5PI|AT5PTASE1|inositol polyphosphate 5-phosphatase I|MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 1|F12G12.6|F12G12_6|INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I|INOSITOL POLYPHOSPHATE 5-PHOSPHATASE AT5P1   protein taxon:3702      20080924        TAIR            TAIR:locus:2009061
@@ -315367,7 +315366,6 @@ TAIR  locus:2065873   AT2G31690.1             PO:0009001      TAIR:Publication:501720678|PMID:17259
 TAIR   locus:2065873   AT2G31690.1             PO:0009005      TAIR:Publication:501720678|PMID:17259290        IEP             S       AT2G31690       AT2G31690|T9H9.21|T9H9_21       protein taxon:3702      20070510        TAIR            TAIR:locus:2065873
 TAIR   locus:2065873   AT2G31690.1             PO:0009046      TAIR:Publication:501720678|PMID:17259290        IEP             S       AT2G31690       AT2G31690|T9H9.21|T9H9_21       protein taxon:3702      20070510        TAIR            TAIR:locus:2065873
 TAIR   locus:2065873   AT2G31690.1             PO:0009053      TAIR:Publication:501720678|PMID:17259290        IEP             S       AT2G31690       AT2G31690|T9H9.21|T9H9_21       protein taxon:3702      20070510        TAIR            TAIR:locus:2065873
-TAIR   locus:2149725   TAAC            PO:0004706      TAIR:Publication:501720675|PMID:17261580        IEP             S       AT5G01500       AT5G01500|TAAC|thylakoid ATP/ADP carrier|F7A7.20|F7A7_20        protein taxon:3702      20070426        TAIR            TAIR:locus:2149725
 TAIR   locus:2149725   TAAC            PO:0009001      TAIR:Publication:501720675|PMID:17261580        IEP             S       AT5G01500       AT5G01500|TAAC|thylakoid ATP/ADP carrier|F7A7.20|F7A7_20        protein taxon:3702      20070426        TAIR            TAIR:locus:2149725
 TAIR   locus:2149725   TAAC            PO:0009025      TAIR:Publication:501720675|PMID:17261580        IEP             S       AT5G01500       AT5G01500|TAAC|thylakoid ATP/ADP carrier|F7A7.20|F7A7_20        protein taxon:3702      20070426        TAIR            TAIR:locus:2149725
 TAIR   locus:2120402   PCAP1           PO:0000013      TAIR:Publication:501720666|PMID:17264065        IEP             S       AT4G20260       AT4G20260|ATPCAP1|PCAP1|MDP25|ARABIDOPSIS THALIANA PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1|plasma-membrane associated cation-binding protein 1|microtubule-destabilizing protein 25|F1C12.180|F1C12_180|AtPCaP1     protein taxon:3702      20081011        TAIR            TAIR:locus:2120402
@@ -316332,7 +316330,6 @@ TAIR  locus:2076512   RPK2            PO:0009071      TAIR:Publication:501721442|PMID:17419837        IDA
 TAIR   locus:2016600   AAP1            PO:0000027      TAIR:Publication:501721440|PMID:17419840        IDA             S       AT1G58360       AT1G58360|AAP1|NAT2|amino acid permease 1|NEUTRAL AMINO ACID TRANSPORTER 2      protein taxon:3702      20070621        TAIR            TAIR:locus:2016600
 TAIR   locus:2176357   QQT1            PO:0000016      TAIR:Publication:501721439|PMID:17419841        IEP             S       AT5G22370       AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17     protein taxon:3702      20071113        TAIR            TAIR:locus:2176357
 TAIR   locus:2176357   QQT1            PO:0000025      TAIR:Publication:501721439|PMID:17419841        IEP             S       AT5G22370       AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17     protein taxon:3702      20071113        TAIR            TAIR:locus:2176357
-TAIR   locus:2176357   QQT1            PO:0004706      TAIR:Publication:501721439|PMID:17419841        IEP             S       AT5G22370       AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17     protein taxon:3702      20071113        TAIR            TAIR:locus:2176357
 TAIR   locus:2176357   QQT1            PO:0006085      TAIR:Publication:501721439|PMID:17419841        IEP             S       AT5G22370       AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17     protein taxon:3702      20071113        TAIR            TAIR:locus:2176357
 TAIR   locus:2176357   QQT1            PO:0006203      TAIR:Publication:501721439|PMID:17419841        IEP             S       AT5G22370       AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17     protein taxon:3702      20071113        TAIR            TAIR:locus:2176357
 TAIR   locus:2119093   QQT2            PO:0009005      TAIR:Publication:501721439|PMID:17419841        IEP             S       AT4G21800       AT4G21800|QQT2|quatre-quart2|F17L22.260|F17L22_260      protein taxon:3702      20071113        TAIR            TAIR:locus:2119093
@@ -317581,7 +317578,6 @@ TAIR  locus:2090734   ABCB19          PO:0020124      TAIR:Publication:501722560|PMID:17557807        I
 TAIR   locus:2126881   JLO             PO:0000019      TAIR:Publication:501722558|PMID:17557810        IDA             S       AT4G00220       AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4      protein taxon:3702      20071126        TAIR            TAIR:locus:2126881
 TAIR   locus:2126881   JLO             PO:0004704      TAIR:Publication:501722558|PMID:17557810        IDA             S       AT4G00220       AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4      protein taxon:3702      20071126        TAIR            TAIR:locus:2126881
 TAIR   locus:2126881   JLO             PO:0004705      TAIR:Publication:501722558|PMID:17557810        IDA             S       AT4G00220       AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4      protein taxon:3702      20071126        TAIR            TAIR:locus:2126881
-TAIR   locus:2126881   JLO             PO:0004706      TAIR:Publication:501722558|PMID:17557810        IDA             S       AT4G00220       AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4      protein taxon:3702      20071126        TAIR            TAIR:locus:2126881
 TAIR   locus:2126881   JLO             PO:0020003      TAIR:Publication:501722558|PMID:17557810        IDA             S       AT4G00220       AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4      protein taxon:3702      20071126        TAIR            TAIR:locus:2126881
 TAIR   locus:2034163   AS2             PO:0000017      TAIR:Publication:501722551|PMID:17559509        IDA             S       AT1G65620       AT1G65620|AS2|ASYMMETRIC LEAVES 2|F5I14.15|F5I14_15     protein taxon:3702      20070912        TAIR            TAIR:locus:2034163
 TAIR   locus:2034163   AS2             PO:0000025      TAIR:Publication:501722551|PMID:17559509        IEP             S       AT1G65620       AT1G65620|AS2|ASYMMETRIC LEAVES 2|F5I14.15|F5I14_15     protein taxon:3702      20070913        TAIR            TAIR:locus:2034163
@@ -318882,7 +318878,6 @@ TAIR  locus:2005494   ATH1            PO:0009025      TAIR:Publication:501723041|PMID:17908157        IEP
 TAIR   locus:2005494   ATH1            PO:0020148      TAIR:Publication:501723041|PMID:17908157        IEP             S       AT4G32980       AT4G32980|ATH1|homeobox gene 1|F26P21.100|F26P21_100    protein taxon:3702      20071114        TAIR            TAIR:locus:2005494
 TAIR   locus:2116752   ENP             PO:0000001      TAIR:Publication:501724253|PMID:17913786        IDA             S       AT4G31820       AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702      20080407        TAIR            TAIR:locus:2116752
 TAIR   locus:2116752   ENP             PO:0000017      TAIR:Publication:501724253|PMID:17913786        IDA             S       AT4G31820       AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702      20080407        TAIR            TAIR:locus:2116752
-TAIR   locus:2116752   ENP             PO:0004706      TAIR:Publication:501724253|PMID:17913786        IDA             S       AT4G31820       AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702      20080407        TAIR            TAIR:locus:2116752
 TAIR   locus:2116752   ENP             PO:0006210      TAIR:Publication:501724253|PMID:17913786        IDA             S       AT4G31820       AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702      20080407        TAIR            TAIR:locus:2116752
 TAIR   locus:2116752   ENP             PO:0020020      TAIR:Publication:501724253|PMID:17913786        IDA             S       AT4G31820       AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702      20080407        TAIR            TAIR:locus:2116752
 TAIR   locus:2116752   ENP             PO:0020021      TAIR:Publication:501724253|PMID:17913786        IDA             S       AT4G31820       AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702      20080407        TAIR            TAIR:locus:2116752
@@ -319707,7 +319702,6 @@ TAIR  locus:2172003   RHA1            PO:0009025      TAIR:Publication:501724632|PMID:18381353        IEP
 TAIR   locus:2183906   CRN             PO:0000230      TAIR:Publication:501724631|PMID:18381924        IDA             S       AT5G13290       AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702      20080829        TAIR            TAIR:locus:2183906
 TAIR   locus:2183906   CRN             PO:0004703      TAIR:Publication:501724631|PMID:18381924        IDA             S       AT5G13290       AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702      20080829        TAIR            TAIR:locus:2183906
 TAIR   locus:2183906   CRN             PO:0004705      TAIR:Publication:501724631|PMID:18381924        IDA             S       AT5G13290       AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702      20080829        TAIR            TAIR:locus:2183906
-TAIR   locus:2183906   CRN             PO:0004706      TAIR:Publication:501724631|PMID:18381924        IDA             S       AT5G13290       AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702      20080829        TAIR            TAIR:locus:2183906
 TAIR   locus:2183906   CRN             PO:0008016      TAIR:Publication:501724631|PMID:18381924        IDA             S       AT5G13290       AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702      20080829        TAIR            TAIR:locus:2183906
 TAIR   locus:2183906   CRN             PO:0009009      TAIR:Publication:501724631|PMID:18381924        IDA             S       AT5G13290       AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702      20080829        TAIR            TAIR:locus:2183906
 TAIR   locus:2183906   CRN             PO:0009015      TAIR:Publication:501724631|PMID:18381924        IDA             S       AT5G13290       AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702      20080829        TAIR            TAIR:locus:2183906
@@ -322597,7 +322591,6 @@ TAIR  gene:1009022758 ATP1            PO:0009025      TAIR:Publication:501725189|PMID:18538804        I
 TAIR   locus:2092180   RGS1            PO:0000293      TAIR:Publication:501725175|PMID:18541915        IEP             S       AT3G26090       AT3G26090|RGS1|ATRGS1|REGULATOR OF G-PROTEIN SIGNALING 1|MPE11.28       protein taxon:3702      20080808        TAIR            TAIR:locus:2092180
 TAIR   locus:2094118   KRP6            PO:0000245      TAIR:Publication:501725143|PMID:18552199        IDA             S       AT3G19150       AT3G19150|KRP6|ICK4|ACK1|KIP-related protein 6|ARABIDOPSIS CDK INHIBITOR 1|MVI11.5|KIP-RELATED PROTEIN 6        protein taxon:3702      20080730        TAIR            TAIR:locus:2094118
 TAIR   locus:2129525   RHF1A           PO:0004705      TAIR:Publication:501725143|PMID:18552199        IDA             S       AT4G14220       AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146    protein taxon:3702      20080729        TAIR            TAIR:locus:2129525
-TAIR   locus:2129525   RHF1A           PO:0004706      TAIR:Publication:501725143|PMID:18552199        IDA             S       AT4G14220       AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146    protein taxon:3702      20080729        TAIR            TAIR:locus:2129525
 TAIR   locus:2094118   KRP6            PO:0006015      TAIR:Publication:501725143|PMID:18552199        IDA             S       AT3G19150       AT3G19150|KRP6|ICK4|ACK1|KIP-related protein 6|ARABIDOPSIS CDK INHIBITOR 1|MVI11.5|KIP-RELATED PROTEIN 6        protein taxon:3702      20080730        TAIR            TAIR:locus:2094118
 TAIR   locus:2129525   RHF1A           PO:0009029      TAIR:Publication:501725143|PMID:18552199        IDA             S       AT4G14220       AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146    protein taxon:3702      20080729        TAIR            TAIR:locus:2129525
 TAIR   locus:2129525   RHF1A           PO:0009030      TAIR:Publication:501725143|PMID:18552199        IDA             S       AT4G14220       AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146    protein taxon:3702      20080729        TAIR            TAIR:locus:2129525
@@ -341231,7 +341224,6 @@ TAIR  locus:2176402   RHS18           PO:0000256      TAIR:Publication:501730387|PMID:19448035        ID
 TAIR   locus:2158227   RHS19           PO:0000256      TAIR:Publication:501730387|PMID:19448035        IDA             S       AT5G67400       AT5G67400|RHS19|root hair specific 19|K8K14.13|K8K14_13 protein taxon:3702      20090916        TAIR            TAIR:locus:2158227
 TAIR   locus:2040292   BOP2            PO:0000229      TAIR:Publication:501730595|PMID:19482972        IDA             S       AT2G41370       AT2G41370|BOP2|BLADE ON PETIOLE2|F13H10.8|F13H10_8      protein taxon:3702      20110509        TAIR            TAIR:locus:2040292
 TAIR   locus:2182993   PUCHI           PO:0000229      TAIR:Publication:501730595|PMID:19482972        IDA             S       AT5G18560       AT5G18560|PUCHI|T28N17.40|T28N17_40     protein taxon:3702      20110509        TAIR            TAIR:locus:2182993
-TAIR   locus:2182993   PUCHI           PO:0004706      TAIR:Publication:501730595|PMID:19482972        IDA             S       AT5G18560       AT5G18560|PUCHI|T28N17.40|T28N17_40     protein taxon:3702      20110509        TAIR            TAIR:locus:2182993
 TAIR   locus:2119657   STP12           PO:0005027      TAIR:Publication:501730592|PMID:19487386        IEP             S       AT4G21480       AT4G21480|STP12|sugar transporter protein 12|F18E5.100|F18E5_100        protein taxon:3702      20090904        TAIR            TAIR:locus:2119657
 TAIR   locus:2196583   ECB2            PO:0000003      TAIR:Publication:501730574|PMID:19500301        IEP             S       AT1G15510       AT1G15510|ATECB2|ECB2|VAC1|ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2|EARLY CHLOROPLAST BIOGENESIS2|VANILLA CREAM 1|T16N11.2|T16N11_2    protein taxon:3702      20101123        TAIR            TAIR:locus:2196583
 TAIR   locus:2196583   ECB2            PO:0020030      TAIR:Publication:501730574|PMID:19500301        IEP             S       AT1G15510       AT1G15510|ATECB2|ECB2|VAC1|ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2|EARLY CHLOROPLAST BIOGENESIS2|VANILLA CREAM 1|T16N11.2|T16N11_2    protein taxon:3702      20090910        TAIR            TAIR:locus:2196583
@@ -342557,7 +342549,6 @@ TAIR  locus:2202084   SUB             PO:0006085      TAIR:Publication:501736395|PMID:20298225        IEP
 TAIR   locus:2178002   PRE1            PO:0000013      TAIR:Publication:501736371|PMID:20305124        IDA             S       AT5G39860       AT5G39860|PRE1|BNQ1|BHLH136|PACLOBUTRAZOL  RESISTANCE1|BANQUO 1|BASIC HELIX-LOOP-HELIX PROTEIN 136|MYH19.1|MYH19_1      protein taxon:3702      20100516        TAIR            TAIR:locus:2178002
 TAIR   locus:2150916   BNQ2            PO:0004703      TAIR:Publication:501736371|PMID:20305124        IDA             S       AT5G15160       AT5G15160|BNQ2|BHLH134|BANQUO 2|BASIC HELIX-LOOP-HELIX PROTEIN 134|F8M21.50|F8M21_50    protein taxon:3702      20100516        TAIR            TAIR:locus:2150916
 TAIR   locus:2150916   BNQ2            PO:0004705      TAIR:Publication:501736371|PMID:20305124        IDA             S       AT5G15160       AT5G15160|BNQ2|BHLH134|BANQUO 2|BASIC HELIX-LOOP-HELIX PROTEIN 134|F8M21.50|F8M21_50    protein taxon:3702      20100516        TAIR            TAIR:locus:2150916
-TAIR   locus:2100342   BNQ3            PO:0004706      TAIR:Publication:501736371|PMID:20305124        IDA             S       AT3G47710       AT3G47710|BNQ3|BHLH161|BANQUO 3|BASIC HELIX-LOOP-HELIX PROTEIN 161|T23J7.40     protein taxon:3702      20100516        TAIR            TAIR:locus:2100342
 TAIR   locus:2100342   BNQ3            PO:0009030      TAIR:Publication:501736371|PMID:20305124        IDA             S       AT3G47710       AT3G47710|BNQ3|BHLH161|BANQUO 3|BASIC HELIX-LOOP-HELIX PROTEIN 161|T23J7.40     protein taxon:3702      20100516        TAIR            TAIR:locus:2100342
 TAIR   locus:2100342   BNQ3            PO:0009031      TAIR:Publication:501736371|PMID:20305124        IDA             S       AT3G47710       AT3G47710|BNQ3|BHLH161|BANQUO 3|BASIC HELIX-LOOP-HELIX PROTEIN 161|T23J7.40     protein taxon:3702      20100516        TAIR            TAIR:locus:2100342
 TAIR   locus:2178002   PRE1            PO:0009031      TAIR:Publication:501736371|PMID:20305124        IDA             S       AT5G39860       AT5G39860|PRE1|BNQ1|BHLH136|PACLOBUTRAZOL  RESISTANCE1|BANQUO 1|BASIC HELIX-LOOP-HELIX PROTEIN 136|MYH19.1|MYH19_1      protein taxon:3702      20100516        TAIR            TAIR:locus:2178002
@@ -344532,7 +344523,6 @@ TAIR  locus:2156727   ADF10           PO:0025281      TAIR:Publication:501743260|PMID:21632657        IE
 TAIR   locus:2163533   MOB1-like               PO:0006204      TAIR:Publication:501743231|PMID:21641974        IDA             S       AT5G45550       AT5G45550|MOB1-like|MOB1-like|MFC19.22|MFC19_22 protein taxon:3702      20110715        TAIR            TAIR:locus:2163533
 TAIR   locus:2041459   UBQ6            PO:0000003      TAIR:Publication:5618|PMID:2165066      IEP             S       AT2G47110       AT2G47110|UBQ6|UBI6|ubiquitin 6|UBIQUITIN EXTENSION PROTEIN 6|F14M4.6   protein taxon:3702      20030508        TAIR            TAIR:locus:2041459
 TAIR   locus:2040332   WIH2            PO:0000017      TAIR:Publication:501743186|PMID:21658947        IEP             S       AT2G41420       AT2G41420|WIH2|WINDHOSE 2|F13H10.3|F13H10_3     protein taxon:3702      20110731        TAIR            TAIR:locus:2040332
-TAIR   locus:2158631   WIH1            PO:0004706      TAIR:Publication:501743186|PMID:21658947        IEP             S       AT5G67600       AT5G67600|WIH1|WINDHOSE 1|K9I9.17|K9I9_17       protein taxon:3702      20110731        TAIR            TAIR:locus:2158631
 TAIR   locus:2158631   WIH1            PO:0006085      TAIR:Publication:501743186|PMID:21658947        IEP             S       AT5G67600       AT5G67600|WIH1|WINDHOSE 1|K9I9.17|K9I9_17       protein taxon:3702      20110731        TAIR            TAIR:locus:2158631
 TAIR   locus:2158631   WIH1            PO:0020020      TAIR:Publication:501743186|PMID:21658947        IEP             S       AT5G67600       AT5G67600|WIH1|WINDHOSE 1|K9I9.17|K9I9_17       protein taxon:3702      20110731        TAIR            TAIR:locus:2158631
 TAIR   locus:2040332   WIH2            PO:0020023      TAIR:Publication:501743186|PMID:21658947        IEP             S       AT2G41420       AT2G41420|WIH2|WINDHOSE 2|F13H10.3|F13H10_3     protein taxon:3702      20110731        TAIR            TAIR:locus:2040332

diff --git a/po-associations/po_anatomy_gene_oryza_gramene.assoc b/po-associations/po_anatomy_gene_oryza_gramene.assoc
index d05fbcec9c8f33acd4f76bb3c05d996b4589cdaa..c898bc8d546e2022ecaf54fd5079563e1232d9b1 100644 (file)
--- a/po-associations/po_anatomy_gene_oryza_gramene.assoc
+++ b/po-associations/po_anatomy_gene_oryza_gramene.assoc
@@ -356,7 +356,6 @@ GR_gene     GR:0080038      TAC1            PO:0004700      GR_ref:11269|PMID:16141453      IMP     Q58GE3  A       unde
 GR_gene        GR:0080061      PROG1           PO:0004703      GR_ref:11367|PMID:15604733      IEP     Q7XIM7  A       YABBY1  OsYAB1  gene    taxon:4530      20090923        GR\r
 GR_gene        GR:0060106      C               PO:0004705      GR_ref:11367|PMID:15604733      IEP     Q7XIM7  A       YABBY1  OsYAB1  gene    taxon:4530      20090923        GR\r
 GR_gene        GR:0060203      D23             PO:0004705      GR_ref:11425|PMID:15682279      IEP     Q9XJ66  A       MADS22  OsMADS22|STMADS11-like|RMD1     gene    taxon:4530      20090923        GR\r
-GR_gene        GR:0060204      D24             PO:0004706      GR_ref:8170|PMID:14750524       IEP     Q8GT95  A       floral organ regulator 1        OsFOR1  gene    taxon:4530      20090923        GR\r
 GR_gene        GR:0060222      D57             PO:0004709      GR_ref:7848|PMID:12687001       IMP     Q84MM9  A       Monoculm 1              gene    taxon:4530      20090923        GR\r
 GR_gene        GR:0060289      EL              PO:0004709      GR_ref:7850|PMID:12581309       IEP     Q9ATR4  A       TEOSINTE BRANCHED 1     OsTB1|Fine culm 1|fc1   gene    taxon:4530      20090923        GR\r
 GR_gene        GR:0060476      IPL3            PO:0004709      GR_ref:11422|PMID:17092317      IMP     Q7XU29  A       High-Tillering Dwarf1   OsCCD7  gene    taxon:4530      20090923        GR\r