From: cooperl Date: Tue, 19 Nov 2024 17:18:33 +0000 (+0000) Subject: Fixed a few gene names X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=024b2f734cc93342bb0d297405629e9c9da2399e;p=associations%2F.git Fixed a few gene names svn path=/; revision=1129 --- diff --git a/po-associations/po_anatomy_gene_oryza_poc.assoc b/po-associations/po_anatomy_gene_oryza_poc.assoc index 20f7a59..4fc660a 100644 --- a/po-associations/po_anatomy_gene_oryza_poc.assoc +++ b/po-associations/po_anatomy_gene_oryza_poc.assoc @@ -18153,7 +18153,7 @@ RAP-DB Os11g0455800 Os11g0455800 PO:0009047 DOI:10.1371/journal.pone.0026162 IE RAP-DB Os11g0457300 Os11g0457300 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Flavonol 3-O-glucosyltransferase (EC 24191) (UDP-glucose flavonoid 3-O-glucosyltransferase) (Anthocyanin rhamnosyl transferase) UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) RAP-DB Os11g0459300 Os11g0459300 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) RAP-DB Os11g0459600 Os11g0459600 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Non-protein coding transcript, uncharacterized transcript retrotransposon protein, putative, unclassified gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) -RAP-DB Os11g0488400 Os11g0488400 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) +RAP-DB Os11g0488400 Os11g0488400 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Conserved hypothetical protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) RAP-DB Os11g0490600 Os11g0490600 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) RAP-DB Os11g0503400 Os11g0503400 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A ARM repeat fold domain containing protein expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) RAP-DB Os11g0522000 Os11g0522000 PO:0009047 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A XY4 protein (Fragment) phosphoglycerate mutase, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007130) @@ -29455,7 +29455,7 @@ RAP-DB Os11g0257200 Os11g0257200 PO:0009005 DOI:10.1371/journal.pone.0026162 IE RAP-DB Os11g0258500 Os11g0258500 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Disease resistance protein family protein RGH1A, putative gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0265800 Os11g0265800 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A 2OG-Fe(II) oxygenase domain containing protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0266500 Os11g0266500 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Disease resistance protein family protein mal, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) -RAP-DB Os11g0269900 Os11g0269900 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Enoyl-CoA hydratase/isomerase domain containing protein carnitine racemase like protein, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) +RAP-DB Os11g0269900 Os11g0269900 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical conserved gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0270000 Os11g0270000 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene carnitine racemase like protein, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0270500 Os11g0270500 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Disease resistance protein family protein NB-ARC domain containing protein, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0274100 Os11g0274100 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Protein kinase domain containing protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) diff --git a/po-associations/po_gene_Oryza_Zhang_2021.assoc b/po-associations/po_gene_Oryza_Zhang_2021.assoc index 1aae2e5..accf0b1 100644 --- a/po-associations/po_gene_Oryza_Zhang_2021.assoc +++ b/po-associations/po_gene_Oryza_Zhang_2021.assoc @@ -2205,7 +2205,7 @@ RAP-DB Os10g0536100 OsMADS56 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A M RAP-DB Os10g0547500 OsLsi3 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A LOW SILICON RICE 3 gene NCBITaxon:39947 20241105 PO:Laurel_Cooper RAP-DB Os11g0149400 OsPSK2 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A phytosulfokine 2 gene NCBITaxon:39947 20241105 PO:Laurel_Cooper RAP-DB Os11g0177400 OsABCG27 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A ABC transporter superfamily ABCG subgroup member 27 gene NCBITaxon:39947 20241105 PO:Laurel_Cooper -RAP-DB Os11g0180000 Os11g0180000 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A DIR domain protein 41 gene NCBITaxon:39947 20241105 PO:Laurel_Cooper +RAP-DB Os11g0180000 OsDIR41 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A DIR domain protein 41 gene NCBITaxon:39947 20241105 PO:Laurel_Cooper RAP-DB Os11g0291450 Os11g0291450 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A Non-protein coding transcript gene NCBITaxon:39947 20241105 PO:Laurel_Cooper RAP-DB Os11g0488600 Os11g0488600 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A Conserved hypothetical protein gene NCBITaxon:39947 20241105 PO:Laurel_Cooper RAP-DB Os11g0508600 XA41 PO:0006203 DOI:10.1038/s41467-021-22352-4 HEP A XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 41 gene NCBITaxon:39947 20241105 PO:Laurel_Cooper