From: johnseth Date: Fri, 21 Aug 2015 23:18:14 +0000 (+0000) Subject: renamed test_PPPP/PO_ontology_IMP_gene_G.max.assoc,/PO_ontology_IMP_gene_M.truncatula... X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=201df77c2e9ae2a2a2e95f3a68a61e775820509d;p=associations%2F.git renamed test_PPPP/PO_ontology_IMP_gene_G.max.assoc,/PO_ontology_IMP_gene_M.truncatula.assoc,/PO_ontology_IMP_gene_S.lycopersum.assoc svn path=/; revision=523 --- diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_G.max.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_G.max.assoc new file mode 100644 index 0000000..91276bd --- /dev/null +++ b/po-associations/test_PPPP/PO_ontology_IMP_gene_G.max.assoc @@ -0,0 +1,34 @@ +SOY_gene Glyma01g36600 E2-1 PO:0007016 PMID: 25774204 IMP G Glyma01g36600 E2 gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma02g05450 Wp PO:0009046 PMID: 25774204 IMP A Glyma02g05450 Wp gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma02g05450 Wp PO:0009088 PMID: 25774204 IMP A Glyma02g05450 Wp gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma02g39230 GmFAD3-2 PO:0009010 PMID: 25774204 IMP A Glyma02g39230 FAD3-2 gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma03g32500 GmLPA1-1 PO:0009010 PMID: 25774204 IMP A Glyma03g32500 LPA1-1 gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma05g27840 Eu1-1 PO:0009009 PMID: 25774204 IMP A Glyma05g27840 ESU gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma06g18890.1 RS2 PO:0009010 PMID: 25774204 IMP A Glyma06g18890.1 Raffinose synthase gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma06g18890.1 RS1-2 PO:0009010 PMID: 25774204 IMP A Glyma06g18890.1 Raffinose synthase gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma06g19820 AMDH2 BADH2 PO:0009010 PMID: 25774204 IMP A Glyma06g19820 GmAMDH2 gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma06g21920 T PO:0000282 PMID: 25774204 IMP A Glyma06g21920 Tawny gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma06g21920 T PO:0020063 PMID: 25774204 IMP A Glyma06g21920 Tawny gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma08g06630 ANR1 PO:0009088 PMID: 25774204 IMP A Glyma08g06630 ANR1 gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma08g08970 Eu3-1 PO:0000003 PMID: 25774204 IMP A Glyma08g08970 GmUreG gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma09g36983 PO:0020063 PMID: 25774204 IMP A Glyma09g36983 R2R MYB Transcription Factor gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma09g36983 PO:0009088 PMID: 25774204 IMP A Glyma09g36983 R2R MYB Transcription Factor gene taxon:3847 20150716 Ethan Johnson +SOY_gene Glyma10g42470 GmFAD2-1 PO:0009010 PMID: 25774204 IMP A Glyma10g42470 FAD2-1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma11g27480 GmAS1-A PO:0009088 PMID: 25774204 IMP A Glyma11g27480 Asparagine synthase 1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma11g27480 GmAS1-A PO:0009010 PMID: 25774204 IMP A Glyma11g27480 Asparagine synthase 1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma11g37250 EU4-1 PO:0000003 PMID: 25774204 IMP A Glyma11g37250 UU gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma14g04380 Eu2-1 PO:0000003 PMID: 25774204 IMP A Glyma14g04380 GmUreF gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma14g09510 GmASPGB1-A PO:0009088 PMID: 25774204 IMP A Glyma14g09510 Asparaginase B1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma14g09510 GmASPGB1-A PO:0009010 PMID: 25774204 IMP A Glyma14g09510 Asparaginase B1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma14g27990 GmFAB2-3 PO:0009010 PMID: 25774204 IMP A Glyma14g27990 FAB2-3 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma14g37350 GmFAD3-1 PO:0009010 PMID: 25774204 IMP A Glyma14g37350 FAD3-1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma16g01980 GmLHY1 PO:0020100 PMID: 25774204 IMP A Glyma16g01980 MYB Transcription Factor gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma16g01980 GmLHY1 PO:0007016 PMID: 25774204 IMP G Glyma16g01980 MYB Transcription Factor gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma16g04830 GmFT5-A PO:0007016 PMID: 25774204 IMP G Glyma16g04830 FT-5A gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma16g26660 GmFT2-A PO:0007016 PMID: 25774204 IMP G Glyma16g26660 FT-2A gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma18g02210 MIPS1 PO:0007030 PMID: 25774204 IMP G Glyma18g02210 GmMIPS1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma18g06950 GmFAD3-3 PO:0009010 PMID: 25774204 IMP A Glyma18g06950 FAD3-3 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma19g35230 GmLPA1-2 PO:0009010 PMID: 25774204 IMP A Glyma19g35230 LPA1-2 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma20g24530 GmFAD2-2 PO:0009010 PMID: 25774204 IMP A Glyma20g24530 FAD2-2 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma20g25000 Ln PO:0020049 PMID: 25774204 IMP A Glyma20g25000 GmJagged1 gene taxon:3847 20150717 Ethan Johnson +SOY_gene Glyma20g25000 Ln PO:0000003 PMID: 25774204 IMP A Glyma20g25000 GmJagged1 gene taxon:3847 20150717 Ethan Johnson \ No newline at end of file diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_M.truncatula.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_M.truncatula.assoc new file mode 100644 index 0000000..667d042 --- /dev/null +++ b/po-associations/test_PPPP/PO_ontology_IMP_gene_M.truncatula.assoc @@ -0,0 +1,81 @@ +LIS Medtr5g030920 nork PO:0025025 PMID: 25774204 IMP A Medtr5g030920 nodulation receptor kinase gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g030920 nork PO:0003023 PMID: 25774204 IMP A Medtr5g030920 nodulation receptor kinase gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g086130 LYK3 PO:0025025 PMID: 25774204 IMP A Medtr5g086130 LYSIN MOTIF RECEPTOR-LIKE KINASE 3 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g086130 LYK3 PO:0003023 PMID: 25774204 IMP A Medtr5g086130 LYSIN MOTIF RECEPTOR-LIKE KINASE 3 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g086120 LYK4 PO:0025025 PMID: 25774204 IMP A Medtr5g086120 LYSIN MOTIF RECEPTOR-LIKE KINASE 4 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g086120 LYK4 PO:0003023 PMID: 25774204 IMP A Medtr5g086120 LYSIN MOTIF RECEPTOR-LIKE KINASE 4 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr2g005870 DMI1 PO:0025025 PMID: 25774204 IMP A Medtr2g005870 doesn't make infections 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr2g005870 DMI1 PO:0003023 PMID: 25774204 IMP A Medtr2g005870 doesn't make infections 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g043970 DMI3 PO:0025025 PMID: 25774204 IMP A Medtr8g043970 doesn't make infections 3 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g043970 DMI3 PO:0003023 PMID: 25774204 IMP A Medtr8g043970 doesn't make infections 3 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g022030 CDPK1 PO:0000256 PMID: 25774204 IMP A Medtr5g022030 calcium-dependent protein kinase 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g022030 CDPK1 PO:0025025 PMID: 25774204 IMP A Medtr5g022030 calcium-dependent protein kinase 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g022030 CDPK1 PO:0003023 PMID: 25774204 IMP A Medtr5g022030 calcium-dependent protein kinase 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr6g071190 FCL1 PO:0020049 PMID: 25774204 IMP A Medtr6g071190 fused compound leaf 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr6g071190 FCL1 PO:0020038 PMID: 25774204 IMP A Medtr6g071190 fused compound leaf 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr6g071190 FCL1 PO:0020055 PMID: 25774204 IMP A Medtr6g071190 fused compound leaf 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g106420 FLOT2 PO:0025025 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g106420 FLOT2 PO:0003023 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g106420 FLOT2 PO:0020127 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g106420 FLOT2 PO:0020121 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g106480 FLOT3 PO:0009005 PMID: 25774204 IMP A Medtr3g106480 Flotillin-like protein 3 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g106430 FLOT4 PO:0025025 PMID: 25774204 IMP A Medtr3g106430 Flotillin-like protein 4 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g106430 FLOT4 PO:0003023 PMID: 25774204 IMP A Medtr3g106430 Flotillin-like protein 4 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g014400 PALM1 PO:0025034 PMID: 25774204 IMP A Medtr5g014400 PALMATE-LIKE PENTAFOLIATA1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g014400 PALM1 PO:0020038 PMID: 25774204 IMP A Medtr5g014400 PALMATE-LIKE PENTAFOLIATA1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g014400 PALM1 PO:0020055 PMID: 25774204 IMP A Medtr5g014400 PALMATE-LIKE PENTAFOLIATA1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr4g084140 MtNAP1 PO:0025025 PMID: 25774204 IMP A Medtr4g084140 Nick-associated protein 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr4g084140 MtNAP1 PO:0003023 PMID: 25774204 IMP A Medtr4g084140 Nick-associated protein 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr4g084140 MtNAP1 PO:0000256 PMID: 25774204 IMP A Medtr4g084140 Nick-associated protein 1 gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0020030 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0009009 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0020049 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0009046 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0025082 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0009029 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0009030 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0020003 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0025208 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0006339 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS AFI56799.1 NAM PO:0009001 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson +LIS Medtr1g090320 LIN PO:0003023 PMID: 25774204 IMP A Medtr1g090320 Lumpy infections gene taxon:3880 20150701 Ethan Johnson +LIS Medtr4g070970 SUNN PO:0009005 PMID: 25774204 IMP A Medtr4g070970 super numeric nodules gene taxon:3880 20150701 Ethan Johnson +LIS Medtr4g070970 SUNN PO:0025025 PMID: 25774204 IMP A Medtr4g070970 super numeric nodules gene taxon:3880 20150701 Ethan Johnson +LIS Medtr4g070970 SUNN PO:0003023 PMID: 25774204 IMP A Medtr4g070970 super numeric nodules gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g106150 MtCre1 PO:0025025 PMID: 25774204 IMP A Medtr8g106150 Cytokinin Response1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g106150 MtCre1 PO:0020121 PMID: 25774204 IMP A Medtr8g106150 Cytokinin Response1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g106150 MtCre1 PO:0003023 PMID: 25774204 IMP A Medtr8g106150 Cytokinin Response1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr7g101410 Skl1 PO:0025025 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr7g101410 Skl1 PO:0009005 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr7g101410 Skl1 PO:0020030 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr7g101410 Skl1 PO:0000012 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr7g101410 Skl1 PO:0000263 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr7g101410 Skl1 PO:0020100 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr1g056530 HAP2.1 PO:0003023 PMID: 25774204 IMP A Medtr1g056530 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g026850 CYCLOPS PO:0025025 PMID: 25774204 IMP A Medtr5g026850 cyclops gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g019040 NFP PO:0025025 PMID: 25774204 IMP A Medtr5g019040 Nod Factor Perception gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g019040 NFP PO:0003023 PMID: 25774204 IMP A Medtr5g019040 Nod Factor Perception gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g098560 SGL1 PO:0020038 PMID: 25774204 IMP A Medtr3g098560 single leaflet1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g098560 SGL1 PO:0009046 PMID: 25774204 IMP A Medtr3g098560 single leaflet1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g011250 ANS PO:0025034 PMID: 25774204 IMP A Medtr5g011250 Anthocyanidin synthase gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g011250 ANS PO:0009010 PMID: 25774204 IMP A Medtr5g011250 Anthocyanidin synthase gene taxon:3880 20150701 Ethan Johnson +LIS CAI29046.1 MtAOC PO:0009005 PMID: 25774204 IMP A CAI29046.1 Allene-oxide cyclase gene taxon:3880 20150701 Ethan Johnson +LIS CAI29046.1 MtAOC PO:0025025 PMID: 25774204 IMP A CAI29046.1 Allene-oxide cyclase gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g099620 bHLH1 PO:0005020 PMID: 25774204 IMP A Medtr3g099620 basic helix loop helix 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g099620 bHLH1 PO:0009006 PMID: 25774204 IMP A Medtr3g099620 basic helix loop helix 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g099620 bHLH1 PO:0003023 PMID: 25774204 IMP A Medtr3g099620 basic helix loop helix 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr1g101600 CBF4 PO:0020127 PMID: 25774204 IMP A Medtr1g101600 C-repeat binding factor 4 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr1g101600 CBF4 PO:0000003 PMID: 25774204 IMP A Medtr1g101600 C-repeat binding factor 4 gene taxon:3880 20150701 Ethan Johnson +LIS CAR57918.1 MtCCD1 PO:0009005 PMID: 25774204 IMP A CAR57918.1 carotenoid cleavage dioxygenase 1 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g058380 CDC16 PO:0025025 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g058380 CDC16 PO:0009005 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g058380 CDC16 PO:0020121 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g058380 CDC16 PO:0003023 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr8g055940 chitIII-3 PO:0025025 PMID: 25774204 IMP A Medtr8g055940 class III chitinase gene taxon:3880 20150701 Ethan Johnson +LIS ABE72958.1 CPK3 PO:0025025 PMID: 25774204 IMP A ABE72958.1 calcium dependent protein kinase 3 gene taxon:3880 20150701 Ethan Johnson +LIS ABE72958.1 CPK3 PO:0003023 PMID: 25774204 IMP A ABE72958.1 calcium dependent protein kinase 3 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr3g021350 cyp716A12 PO:0000003 PMID: 25774204 IMP A Medtr3g021350 cytochrome P450 monoxygenase gene taxon:3880 20150701 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) PO:0000003 PMID: 25774204 IMP A Medtr2g035020 Glycosyltransferase 3 gene taxon:3880 20150701 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) PO:0009005 PMID: 25774204 IMP A Medtr2g035020 Glycosyltransferase 3 gene taxon:3880 20150701 Ethan Johnson +LIS ADC33495.1 VPY PO:0025025 PMID: 25774204 IMP A ADC33495.1 Vapyrin gene taxon:3880 20150701 Ethan Johnson +LIS ADC33495.1 VPY PO:0003023 PMID: 25774204 IMP A ADC33495.1 Vapyrin gene taxon:3880 20150701 Ethan Johnson \ No newline at end of file diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_S.lycopersum.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_S.lycopersum.assoc new file mode 100644 index 0000000..44a2573 --- /dev/null +++ b/po-associations/test_PPPP/PO_ontology_IMP_gene_S.lycopersum.assoc @@ -0,0 +1,147 @@ +SGN_gene 197 b PO:0009001 PMID: 25774204 IMP A Solyc06g074240 Beta-carotene gene taxon:4081 20150708 Ethan Johnson +SGN_gene 197 b PO:0009059 PMID: 25774204 IMP A Solyc06g074240 Beta-carotene gene taxon:4081 20150708 Ethan Johnson +SGN_gene 197 b PO:0025502 PMID: 25774204 IMP G Solyc06g074240 Beta-carotene gene taxon:4081 20150708 Ethan Johnson +SGN_gene 187 bsr4 PO:0000003 PMID: 25774204 IMP A Solyc05g007850 bacterial spot resistance 4 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 799 det1 PO:0025502 PMID: 25774204 IMP G Solyc01g056340 de-etiolated 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 799 det1 PO:0009001 PMID: 25774204 IMP A Solyc01g056340 de-etiolated 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5560 gamybl1 PO:0009010 PMID: 25774204 IMP A Solyc01g009070 gamyb-like 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5560 gamybl1 PO:0009001 PMID: 25774204 IMP A Solyc01g009070 gamyb-like 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 961 man4 PO:0009001 PMID: 25774204 IMP A Solyc01g008710 mannan endo-1,4-beta-mannosidase gene taxon:4081 20150708 Ethan Johnson +SGN_gene 292 y PO:0009001 PMID: 25774204 IMP A Solyc01g079620 colorless fruit epidermis gene taxon:4081 20150708 Ethan Johnson +SGN_gene 292 y PO:0009085 PMID: 25774204 IMP A Solyc01g079620 colorless fruit epidermis gene taxon:4081 20150708 Ethan Johnson +SGN_gene 8308 CD2 PO:0000022 PMID: 25774204 IMP A Solyc01g091630 cutin deficient 2 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 8308 CD2 PO:0009001 PMID: 25774204 IMP A Solyc01g091630 cutin deficient 2 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 8308 CD2 PO:0001002 PMID: 25774204 IMP G Solyc01g091630 cutin deficient 2 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 253 chln PO:0020138 PMID: 25774204 IMP A Solyc01g100490 chloronerva gene taxon:4081 20150708 Ethan Johnson +SGN_gene 253 chln PO:0000003 PMID: 25774204 IMP A Solyc01g100490 chloronerva gene taxon:4081 20150708 Ethan Johnson +SGN_gene 253 chln PO:0009025 PMID: 25774204 IMP A Solyc01g100490 chloronerva gene taxon:4081 20150708 Ethan Johnson +SGN_gene 662 Gr PO:0025037 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson +SGN_gene 662 Gr PO:0009001 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson +SGN_gene 662 Gr PO:0009032 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson +SGN_gene 662 Gr PO:0009046 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson +SGN_gene 662 Gr PO:0007017 PMID: 25774204 IMP G Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson +SGN_gene 1515 ddb1 PO:0009001 PMID: 25774204 IMP A Solyc02g021650 UV damaged DNA binding protein 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 1515 ddb1 PO:0025034 PMID: 25774204 IMP A Solyc02g021650 UV damaged DNA binding protein 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 301 s PO:0009049 PMID: 25774204 IMP A Solyc02g077390 compound inflorescence gene taxon:4081 20150708 Ethan Johnson +SGN_gene 301 s PO:0009081 PMID: 25774204 IMP A Solyc02g077390 compound inflorescence gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5483 LeT6 PO:0020139 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5483 LeT6 PO:0006011 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5483 LeT6 PO:0020038 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5483 LeT6 PO:0009025 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5483 LeT6 PO:0020049 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson +SGN_gene 5483 LeT6 PO:0005005 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson +SGN_gene 128 an PO:0009046 PMID: 25774204 IMP A Solyc02g081670 anantha gene taxon:4081 20150708 Ethan Johnson +SGN_gene 128 an PO:0009049 PMID: 25774204 IMP A Solyc02g081670 anantha gene taxon:4081 20150708 Ethan Johnson +SGN_gene 1094 o PO:0009001 PMID: 25774204 IMP A Solyc02g085500 ovate gene taxon:4081 20150708 Ethan Johnson +SGN_gene 428 d PO:0000003 PMID: 25774204 IMP A Solyc02g089160 dwarf gene taxon:4081 20150708 Ethan Johnson +SGN_gene 428 d PO:0009025 PMID: 25774204 IMP A Solyc02g089160 dwarf gene taxon:4081 20150708 Ethan Johnson +SGN_gene 1599 psy1 PO:0025037 PMID: 25774204 IMP A Solyc03g031860 Phytoene synthase 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 1599 psy1 PO:0009046 PMID: 25774204 IMP A Solyc03g031860 Phytoene synthase 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 1599 psy1 PO:0009001 PMID: 25774204 IMP A Solyc03g031860 Phytoene synthase 1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 4476 zep PO:0000003 PMID: 25774204 IMP A Solyc02g090890 zeaxanthin epoxidase gene taxon:4081 20150708 Ethan Johnson +SGN_gene F CrtR-b2 PO:0009059 PMID: 25774204 IMP A Solyc03g007960 beta-carotene hydroxylase-2 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 1418 sucr PO:0009001 PMID: 25774204 IMP A Solyc03g083910 sucrose accumulator gene taxon:4081 20150708 Ethan Johnson +SGN_gene 120 asc PO:0009047 PMID: 25774204 IMP A Solyc03g114600 Alternaria stem canker resistance gene taxon:4081 20150708 Ethan Johnson +SGN_gene 532 fa PO:0000003 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson +SGN_gene 532 fa PO:0009049 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson +SGN_gene 532 fa PO:0009046 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson +SGN_gene 532 fa PO:0009081 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson +SGN_gene 431 div PO:0000003 PMID: 25774204 IMP A Solyc03g119060 divaricata gene taxon:4081 20150708 Ethan Johnson +SGN_gene 431 div PO:0025034 PMID: 25774204 IMP A Solyc03g119060 divaricata gene taxon:4081 20150708 Ethan Johnson +SGN_gene 996 SlMlo1 PO:0000003 PMID: 25774204 IMP A Solyc04g049090 SlMlo1 gene taxon:4081 20150708 Ethan Johnson +SGN_gene 347 cu3 PO:0000003 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 347 cu3 PO:0020100 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 347 cu3 PO:0020030 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 347 cu3 PO:0025034 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 8373 ORR PO:0009001 PMID: 25774204 IMP A Solyc04g057980 Orange Ripening gene taxon:4081 20150709 Ethan Johnson +SGN_gene 463 e PO:0009025 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson +SGN_gene 463 e PO:0020139 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson +SGN_gene 463 e PO:0020049 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson +SGN_gene 463 e PO:0009031 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson +SGN_gene 463 e PO:0025034 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson +SGN_gene 463 e PO:0000003 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson +SGN_gene 4495 cwp1 PO:0009001 PMID: 25774204 IMP A Solyc04g082520 cuticular water permeability 1 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 4495 cwp1 PO:0000022 PMID: 25774204 IMP A Solyc04g082520 cuticular water permeability 1 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 900 lyr PO:0020039 PMID: 25774204 IMP A Solyc05g009380 lyrate gene taxon:4081 20150709 Ethan Johnson +SGN_gene 900 lyr PO:0009062 PMID: 25774204 IMP A Solyc05g009380 lyrate gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1296 mc PO:0009031 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1296 mc PO:0000146 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1296 mc PO:0009052 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1296 mc PO:0009049 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson +SGN_gene 541 Fen PO:0000003 PMID: 25774204 IMP A Solyc05g013290 Fenthion sensitivity gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1238 Pto PO:0000003 PMID: 25774204 IMP A Solyc05g013300 Pseudomonas syringae pv tomato resis. gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1296 rin PO:0009001 PMID: 25774204 IMP A Solyc05g056620 ripening inhibitor gene taxon:4081 20150709 Ethan Johnson +SGN_gene 271 cf2 PO:0000003 PMID: 25774204 IMP A solyc06g008300 Cladosporium fulvum resistance-2 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1322 sp PO:0000003 PMID: 25774204 IMP A Solyc06g074350 self-pruning gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1068 not PO:0009025 PMID: 25774204 IMP A Solyc07g056570 notabilis gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1068 not PO:0000003 PMID: 25774204 IMP A Solyc07g056570 notabilis gene taxon:4081 20150709 Ethan Johnson +SGN_gene 483 etr2 PO:0020142 PMID: 25774204 IMP A Solyc07g056580 ethylene receptor 2 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 780 ls PO:0009006 PMID: 25774204 IMP A Solyc07g066250 lateral suppresser gene taxon:4081 20150709 Ethan Johnson +SGN_gene 780 ls PO:0009059 PMID: 25774204 IMP A Solyc07g066250 lateral suppresser gene taxon:4081 20150709 Ethan Johnson +SGN_gene 780 ls PO:0000003 PMID: 25774204 IMP A Solyc07g066250 lateral suppresser gene taxon:4081 20150709 Ethan Johnson +SGN_gene 661 gf PO:0009001 PMID: 25774204 IMP A Solyc08g080090 green flesh gene taxon:4081 20150709 Ethan Johnson +SGN_gene 762 lin5 PO:0009001 PMID: 25774204 IMP A Solyc09g010080 invertase 5 gene taxon:4081 20150709 Ethan Johnson +SGN_gene 1164 phyA PO:0000003 PMID: 25774204 IMP A Solyc10g044670 phytochrome A gene taxon:4081 20150710 Ethan Johnson +SGN_gene 111013 sun PO:0009001 PMID: 25774204 IMP A Solyc10g079240 sun gene taxon:4081 20150710 Ethan Johnson +SGN_gene 246 crtiso PO:0009001 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson +SGN_gene 246 crtiso PO:0009029 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson +SGN_gene 246 crtiso PO:0020144 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson +SGN_gene 246 crtiso PO:0009025 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson +SGN_gene 755 j PO:0000003 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson +SGN_gene 755 j PO:0020142 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson +SGN_gene 755 j PO:0009001 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson +SGN_gene 755 j PO:0009010 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson +SGN_gene 755 j PO:0000146 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson +SGN_gene 4504 GAI PO:0004709 PMID: 25774204 IMP A Solyc11g011260 GAI gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1187 ptox PO:0009025 PMID: 25774204 IMP A Solyc11g011990 plastid terminal oxidase gene taxon:4081 20150710 Ethan Johnson +SGN_gene 717 i2 PO:0000003 PMID: 25774204 IMP A Solyc11g071430 Immunity to Fusarium wilt race 2 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 538 fas PO:0025263 PMID: 25774204 IMP A Solyc11g071810 fasciated gene taxon:4081 20150710 Ethan Johnson +SGN_gene 538 fas PO:0009030 PMID: 25774204 IMP A Solyc11g071810 fasciated gene taxon:4081 20150710 Ethan Johnson +SGN_gene 391 del PO:0009001 PMID: 25774204 IMP A Solyc12g008980 Delta gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1605 yg2 PO:0009025 PMID: 25774204 IMP A Solyc12g009470 yellow-green-2 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1605 yg2 PO:0020100 PMID: 25774204 IMP A Solyc12g009470 yellow-green-2 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 482 etr1 PO:0020142 PMID: 25774204 IMP A Solyc12g011330 ethylene receptor 1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 277 cf9 PO:0000003 PMID: 25774204 IMP A AJ002236 Cladosporium fulvum resistance-9 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 687 hero PO:0000003 PMID: 25774204 IMP A AJ457051 Heterodera rostochiensis resistance gene taxon:4081 20150710 Ethan Johnson +SGN_gene 881 lc PO:0009072 PMID: 25774204 IMP A JF284938 Locule number gene taxon:4081 20150710 Ethan Johnson +SGN_gene 881 lc PO:0025263 PMID: 25774204 IMP A JF285116 Locule number gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1305 Mi1-2 PO:0000003 PMID: 25774204 IMP A SGN-U564276 Mi-1.2 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1345 sit PO:0000003 PMID: 25774204 IMP A HQ317907 sitiens gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1345 sit PO:0009025 PMID: 25774204 IMP A HQ317907 sitiens gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1345 tm2 PO:0000003 PMID: 25774204 IMP A AF536200 Tobacco mosaic virus resistance-2 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 111014 wo PO:0000282 PMID: 25774204 IMP A Solyc02g080490 Wooly gene taxon:4081 20150710 Ethan Johnson +SGN_gene 111014 wo PO:0000003 PMID: 25774204 IMP A Solyc02g080490 Wooly gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0020049 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0009046 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0009001 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0020139 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0009060 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0009049 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0000003 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0009047 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 212 bl PO:0009025 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1045 nr PO:0009001 PMID: 25774204 IMP A Solyc09g075440 Never ripe gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1046 Nr2 PO:0025037 PMID: 25774204 IMP A Solyc09g075440 Never ripe-2 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 555 flc PO:0009025 PMID: 25774204 IMP A Solyc07g066480 flacca gene taxon:4081 20150710 Ethan Johnson +SGN_gene 555 flc PO:0000003 PMID: 25774204 IMP A Solyc07g066480 flacca gene taxon:4081 20150710 Ethan Johnson +SGN_gene 539 fer PO:0009025 PMID: 25774204 IMP A Solyc06g051550 fe inefficient gene taxon:4081 20150710 Ethan Johnson +SGN_gene 539 fer PO:0005352 PMID: 25774204 IMP A Solyc06g051550 fe inefficient gene taxon:4081 20150710 Ethan Johnson +SGN_gene 776 la PO:0020042 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson +SGN_gene 776 la PO:0009025 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson +SGN_gene 776 la PO:0009047 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson +SGN_gene 776 la PO:0025073 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson +SGN_gene 776 la PO:0009001 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson +SGN_gene 8229 GOB PO:0020042 PMID: 25774204 IMP A Solyc07g062840 goblet gene taxon:4081 20150710 Ethan Johnson +SGN_gene 8229 GOB PO:0020148 PMID: 25774204 IMP A Solyc07g062840 goblet gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1187 ptox PO:0009025 PMID: 25774204 IMP A Solyc11g011990 plastid terminal oxidase gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1465 APS1 PO:0009001 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1465 APS1 PO:0020127 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1465 APS1 PO:0009047 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1465 APS1 PO:0025508 PMID: 25774204 IMP G APS1 APS1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1465 APS1 PO:0000025 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1465 APS1 PO:0009025 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 1465 APS1 PO:0007131 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson +SGN_gene 20827 rdr6 PO:0009025 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson +SGN_gene 20827 rdr6 PO:0000003 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson +SGN_gene 20827 rdr6 PO:0009032 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson +SGN_gene 20827 rdr6 PO:0020039 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson \ No newline at end of file diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_medicago.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_medicago.assoc deleted file mode 100644 index 667d042..0000000 --- a/po-associations/test_PPPP/PO_ontology_IMP_gene_medicago.assoc +++ /dev/null @@ -1,81 +0,0 @@ -LIS Medtr5g030920 nork PO:0025025 PMID: 25774204 IMP A Medtr5g030920 nodulation receptor kinase gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g030920 nork PO:0003023 PMID: 25774204 IMP A Medtr5g030920 nodulation receptor kinase gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g086130 LYK3 PO:0025025 PMID: 25774204 IMP A Medtr5g086130 LYSIN MOTIF RECEPTOR-LIKE KINASE 3 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g086130 LYK3 PO:0003023 PMID: 25774204 IMP A Medtr5g086130 LYSIN MOTIF RECEPTOR-LIKE KINASE 3 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g086120 LYK4 PO:0025025 PMID: 25774204 IMP A Medtr5g086120 LYSIN MOTIF RECEPTOR-LIKE KINASE 4 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g086120 LYK4 PO:0003023 PMID: 25774204 IMP A Medtr5g086120 LYSIN MOTIF RECEPTOR-LIKE KINASE 4 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr2g005870 DMI1 PO:0025025 PMID: 25774204 IMP A Medtr2g005870 doesn't make infections 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr2g005870 DMI1 PO:0003023 PMID: 25774204 IMP A Medtr2g005870 doesn't make infections 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g043970 DMI3 PO:0025025 PMID: 25774204 IMP A Medtr8g043970 doesn't make infections 3 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g043970 DMI3 PO:0003023 PMID: 25774204 IMP A Medtr8g043970 doesn't make infections 3 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g022030 CDPK1 PO:0000256 PMID: 25774204 IMP A Medtr5g022030 calcium-dependent protein kinase 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g022030 CDPK1 PO:0025025 PMID: 25774204 IMP A Medtr5g022030 calcium-dependent protein kinase 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g022030 CDPK1 PO:0003023 PMID: 25774204 IMP A Medtr5g022030 calcium-dependent protein kinase 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr6g071190 FCL1 PO:0020049 PMID: 25774204 IMP A Medtr6g071190 fused compound leaf 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr6g071190 FCL1 PO:0020038 PMID: 25774204 IMP A Medtr6g071190 fused compound leaf 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr6g071190 FCL1 PO:0020055 PMID: 25774204 IMP A Medtr6g071190 fused compound leaf 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g106420 FLOT2 PO:0025025 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g106420 FLOT2 PO:0003023 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g106420 FLOT2 PO:0020127 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g106420 FLOT2 PO:0020121 PMID: 25774204 IMP A Medtr3g106420 Flotillin-like protein 2 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g106480 FLOT3 PO:0009005 PMID: 25774204 IMP A Medtr3g106480 Flotillin-like protein 3 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g106430 FLOT4 PO:0025025 PMID: 25774204 IMP A Medtr3g106430 Flotillin-like protein 4 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g106430 FLOT4 PO:0003023 PMID: 25774204 IMP A Medtr3g106430 Flotillin-like protein 4 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g014400 PALM1 PO:0025034 PMID: 25774204 IMP A Medtr5g014400 PALMATE-LIKE PENTAFOLIATA1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g014400 PALM1 PO:0020038 PMID: 25774204 IMP A Medtr5g014400 PALMATE-LIKE PENTAFOLIATA1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g014400 PALM1 PO:0020055 PMID: 25774204 IMP A Medtr5g014400 PALMATE-LIKE PENTAFOLIATA1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr4g084140 MtNAP1 PO:0025025 PMID: 25774204 IMP A Medtr4g084140 Nick-associated protein 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr4g084140 MtNAP1 PO:0003023 PMID: 25774204 IMP A Medtr4g084140 Nick-associated protein 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr4g084140 MtNAP1 PO:0000256 PMID: 25774204 IMP A Medtr4g084140 Nick-associated protein 1 gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0020030 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0009009 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0020049 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0009046 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0025082 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0009029 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0009030 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0020003 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0025208 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0006339 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS AFI56799.1 NAM PO:0009001 PMID: 25774204 IMP A AFI56799.1 No Apical Meristem (weak allele) gene taxon:3880 20150701 Ethan Johnson -LIS Medtr1g090320 LIN PO:0003023 PMID: 25774204 IMP A Medtr1g090320 Lumpy infections gene taxon:3880 20150701 Ethan Johnson -LIS Medtr4g070970 SUNN PO:0009005 PMID: 25774204 IMP A Medtr4g070970 super numeric nodules gene taxon:3880 20150701 Ethan Johnson -LIS Medtr4g070970 SUNN PO:0025025 PMID: 25774204 IMP A Medtr4g070970 super numeric nodules gene taxon:3880 20150701 Ethan Johnson -LIS Medtr4g070970 SUNN PO:0003023 PMID: 25774204 IMP A Medtr4g070970 super numeric nodules gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g106150 MtCre1 PO:0025025 PMID: 25774204 IMP A Medtr8g106150 Cytokinin Response1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g106150 MtCre1 PO:0020121 PMID: 25774204 IMP A Medtr8g106150 Cytokinin Response1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g106150 MtCre1 PO:0003023 PMID: 25774204 IMP A Medtr8g106150 Cytokinin Response1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr7g101410 Skl1 PO:0025025 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr7g101410 Skl1 PO:0009005 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr7g101410 Skl1 PO:0020030 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr7g101410 Skl1 PO:0000012 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr7g101410 Skl1 PO:0000263 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr7g101410 Skl1 PO:0020100 PMID: 25774204 IMP A Medtr7g101410 Sickle 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr1g056530 HAP2.1 PO:0003023 PMID: 25774204 IMP A Medtr1g056530 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g026850 CYCLOPS PO:0025025 PMID: 25774204 IMP A Medtr5g026850 cyclops gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g019040 NFP PO:0025025 PMID: 25774204 IMP A Medtr5g019040 Nod Factor Perception gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g019040 NFP PO:0003023 PMID: 25774204 IMP A Medtr5g019040 Nod Factor Perception gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g098560 SGL1 PO:0020038 PMID: 25774204 IMP A Medtr3g098560 single leaflet1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g098560 SGL1 PO:0009046 PMID: 25774204 IMP A Medtr3g098560 single leaflet1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g011250 ANS PO:0025034 PMID: 25774204 IMP A Medtr5g011250 Anthocyanidin synthase gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g011250 ANS PO:0009010 PMID: 25774204 IMP A Medtr5g011250 Anthocyanidin synthase gene taxon:3880 20150701 Ethan Johnson -LIS CAI29046.1 MtAOC PO:0009005 PMID: 25774204 IMP A CAI29046.1 Allene-oxide cyclase gene taxon:3880 20150701 Ethan Johnson -LIS CAI29046.1 MtAOC PO:0025025 PMID: 25774204 IMP A CAI29046.1 Allene-oxide cyclase gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g099620 bHLH1 PO:0005020 PMID: 25774204 IMP A Medtr3g099620 basic helix loop helix 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g099620 bHLH1 PO:0009006 PMID: 25774204 IMP A Medtr3g099620 basic helix loop helix 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g099620 bHLH1 PO:0003023 PMID: 25774204 IMP A Medtr3g099620 basic helix loop helix 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr1g101600 CBF4 PO:0020127 PMID: 25774204 IMP A Medtr1g101600 C-repeat binding factor 4 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr1g101600 CBF4 PO:0000003 PMID: 25774204 IMP A Medtr1g101600 C-repeat binding factor 4 gene taxon:3880 20150701 Ethan Johnson -LIS CAR57918.1 MtCCD1 PO:0009005 PMID: 25774204 IMP A CAR57918.1 carotenoid cleavage dioxygenase 1 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g058380 CDC16 PO:0025025 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g058380 CDC16 PO:0009005 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g058380 CDC16 PO:0020121 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g058380 CDC16 PO:0003023 PMID: 25774204 IMP A Medtr8g058380 cell division cycle 16 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr8g055940 chitIII-3 PO:0025025 PMID: 25774204 IMP A Medtr8g055940 class III chitinase gene taxon:3880 20150701 Ethan Johnson -LIS ABE72958.1 CPK3 PO:0025025 PMID: 25774204 IMP A ABE72958.1 calcium dependent protein kinase 3 gene taxon:3880 20150701 Ethan Johnson -LIS ABE72958.1 CPK3 PO:0003023 PMID: 25774204 IMP A ABE72958.1 calcium dependent protein kinase 3 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr3g021350 cyp716A12 PO:0000003 PMID: 25774204 IMP A Medtr3g021350 cytochrome P450 monoxygenase gene taxon:3880 20150701 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) PO:0000003 PMID: 25774204 IMP A Medtr2g035020 Glycosyltransferase 3 gene taxon:3880 20150701 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) PO:0009005 PMID: 25774204 IMP A Medtr2g035020 Glycosyltransferase 3 gene taxon:3880 20150701 Ethan Johnson -LIS ADC33495.1 VPY PO:0025025 PMID: 25774204 IMP A ADC33495.1 Vapyrin gene taxon:3880 20150701 Ethan Johnson -LIS ADC33495.1 VPY PO:0003023 PMID: 25774204 IMP A ADC33495.1 Vapyrin gene taxon:3880 20150701 Ethan Johnson \ No newline at end of file diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_solanum.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_solanum.assoc deleted file mode 100644 index 44a2573..0000000 --- a/po-associations/test_PPPP/PO_ontology_IMP_gene_solanum.assoc +++ /dev/null @@ -1,147 +0,0 @@ -SGN_gene 197 b PO:0009001 PMID: 25774204 IMP A Solyc06g074240 Beta-carotene gene taxon:4081 20150708 Ethan Johnson -SGN_gene 197 b PO:0009059 PMID: 25774204 IMP A Solyc06g074240 Beta-carotene gene taxon:4081 20150708 Ethan Johnson -SGN_gene 197 b PO:0025502 PMID: 25774204 IMP G Solyc06g074240 Beta-carotene gene taxon:4081 20150708 Ethan Johnson -SGN_gene 187 bsr4 PO:0000003 PMID: 25774204 IMP A Solyc05g007850 bacterial spot resistance 4 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 799 det1 PO:0025502 PMID: 25774204 IMP G Solyc01g056340 de-etiolated 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 799 det1 PO:0009001 PMID: 25774204 IMP A Solyc01g056340 de-etiolated 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5560 gamybl1 PO:0009010 PMID: 25774204 IMP A Solyc01g009070 gamyb-like 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5560 gamybl1 PO:0009001 PMID: 25774204 IMP A Solyc01g009070 gamyb-like 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 961 man4 PO:0009001 PMID: 25774204 IMP A Solyc01g008710 mannan endo-1,4-beta-mannosidase gene taxon:4081 20150708 Ethan Johnson -SGN_gene 292 y PO:0009001 PMID: 25774204 IMP A Solyc01g079620 colorless fruit epidermis gene taxon:4081 20150708 Ethan Johnson -SGN_gene 292 y PO:0009085 PMID: 25774204 IMP A Solyc01g079620 colorless fruit epidermis gene taxon:4081 20150708 Ethan Johnson -SGN_gene 8308 CD2 PO:0000022 PMID: 25774204 IMP A Solyc01g091630 cutin deficient 2 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 8308 CD2 PO:0009001 PMID: 25774204 IMP A Solyc01g091630 cutin deficient 2 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 8308 CD2 PO:0001002 PMID: 25774204 IMP G Solyc01g091630 cutin deficient 2 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 253 chln PO:0020138 PMID: 25774204 IMP A Solyc01g100490 chloronerva gene taxon:4081 20150708 Ethan Johnson -SGN_gene 253 chln PO:0000003 PMID: 25774204 IMP A Solyc01g100490 chloronerva gene taxon:4081 20150708 Ethan Johnson -SGN_gene 253 chln PO:0009025 PMID: 25774204 IMP A Solyc01g100490 chloronerva gene taxon:4081 20150708 Ethan Johnson -SGN_gene 662 Gr PO:0025037 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson -SGN_gene 662 Gr PO:0009001 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson -SGN_gene 662 Gr PO:0009032 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson -SGN_gene 662 Gr PO:0009046 PMID: 25774204 IMP A Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson -SGN_gene 662 Gr PO:0007017 PMID: 25774204 IMP G Solyc01g104340 green ripe gene taxon:4081 20150708 Ethan Johnson -SGN_gene 1515 ddb1 PO:0009001 PMID: 25774204 IMP A Solyc02g021650 UV damaged DNA binding protein 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 1515 ddb1 PO:0025034 PMID: 25774204 IMP A Solyc02g021650 UV damaged DNA binding protein 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 301 s PO:0009049 PMID: 25774204 IMP A Solyc02g077390 compound inflorescence gene taxon:4081 20150708 Ethan Johnson -SGN_gene 301 s PO:0009081 PMID: 25774204 IMP A Solyc02g077390 compound inflorescence gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5483 LeT6 PO:0020139 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5483 LeT6 PO:0006011 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5483 LeT6 PO:0020038 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5483 LeT6 PO:0009025 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5483 LeT6 PO:0020049 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson -SGN_gene 5483 LeT6 PO:0005005 PMID: 25774204 IMP A Solyc02g081120 class 1 knotted-like homeodomain protein gene taxon:4081 20150708 Ethan Johnson -SGN_gene 128 an PO:0009046 PMID: 25774204 IMP A Solyc02g081670 anantha gene taxon:4081 20150708 Ethan Johnson -SGN_gene 128 an PO:0009049 PMID: 25774204 IMP A Solyc02g081670 anantha gene taxon:4081 20150708 Ethan Johnson -SGN_gene 1094 o PO:0009001 PMID: 25774204 IMP A Solyc02g085500 ovate gene taxon:4081 20150708 Ethan Johnson -SGN_gene 428 d PO:0000003 PMID: 25774204 IMP A Solyc02g089160 dwarf gene taxon:4081 20150708 Ethan Johnson -SGN_gene 428 d PO:0009025 PMID: 25774204 IMP A Solyc02g089160 dwarf gene taxon:4081 20150708 Ethan Johnson -SGN_gene 1599 psy1 PO:0025037 PMID: 25774204 IMP A Solyc03g031860 Phytoene synthase 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 1599 psy1 PO:0009046 PMID: 25774204 IMP A Solyc03g031860 Phytoene synthase 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 1599 psy1 PO:0009001 PMID: 25774204 IMP A Solyc03g031860 Phytoene synthase 1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 4476 zep PO:0000003 PMID: 25774204 IMP A Solyc02g090890 zeaxanthin epoxidase gene taxon:4081 20150708 Ethan Johnson -SGN_gene F CrtR-b2 PO:0009059 PMID: 25774204 IMP A Solyc03g007960 beta-carotene hydroxylase-2 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 1418 sucr PO:0009001 PMID: 25774204 IMP A Solyc03g083910 sucrose accumulator gene taxon:4081 20150708 Ethan Johnson -SGN_gene 120 asc PO:0009047 PMID: 25774204 IMP A Solyc03g114600 Alternaria stem canker resistance gene taxon:4081 20150708 Ethan Johnson -SGN_gene 532 fa PO:0000003 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson -SGN_gene 532 fa PO:0009049 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson -SGN_gene 532 fa PO:0009046 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson -SGN_gene 532 fa PO:0009081 PMID: 25774204 IMP A Solyc03g118160 falsiflora gene taxon:4081 20150708 Ethan Johnson -SGN_gene 431 div PO:0000003 PMID: 25774204 IMP A Solyc03g119060 divaricata gene taxon:4081 20150708 Ethan Johnson -SGN_gene 431 div PO:0025034 PMID: 25774204 IMP A Solyc03g119060 divaricata gene taxon:4081 20150708 Ethan Johnson -SGN_gene 996 SlMlo1 PO:0000003 PMID: 25774204 IMP A Solyc04g049090 SlMlo1 gene taxon:4081 20150708 Ethan Johnson -SGN_gene 347 cu3 PO:0000003 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 347 cu3 PO:0020100 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 347 cu3 PO:0020030 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 347 cu3 PO:0025034 PMID: 25774204 IMP A Solyc04g051510 curl-3 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 8373 ORR PO:0009001 PMID: 25774204 IMP A Solyc04g057980 Orange Ripening gene taxon:4081 20150709 Ethan Johnson -SGN_gene 463 e PO:0009025 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson -SGN_gene 463 e PO:0020139 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson -SGN_gene 463 e PO:0020049 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson -SGN_gene 463 e PO:0009031 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson -SGN_gene 463 e PO:0025034 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson -SGN_gene 463 e PO:0000003 PMID: 25774204 IMP A Solyc04g076850 entire gene taxon:4081 20150709 Ethan Johnson -SGN_gene 4495 cwp1 PO:0009001 PMID: 25774204 IMP A Solyc04g082520 cuticular water permeability 1 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 4495 cwp1 PO:0000022 PMID: 25774204 IMP A Solyc04g082520 cuticular water permeability 1 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 900 lyr PO:0020039 PMID: 25774204 IMP A Solyc05g009380 lyrate gene taxon:4081 20150709 Ethan Johnson -SGN_gene 900 lyr PO:0009062 PMID: 25774204 IMP A Solyc05g009380 lyrate gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1296 mc PO:0009031 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1296 mc PO:0000146 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1296 mc PO:0009052 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1296 mc PO:0009049 PMID: 25774204 IMP A Solyc05g012020 macrocalyx gene taxon:4081 20150709 Ethan Johnson -SGN_gene 541 Fen PO:0000003 PMID: 25774204 IMP A Solyc05g013290 Fenthion sensitivity gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1238 Pto PO:0000003 PMID: 25774204 IMP A Solyc05g013300 Pseudomonas syringae pv tomato resis. gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1296 rin PO:0009001 PMID: 25774204 IMP A Solyc05g056620 ripening inhibitor gene taxon:4081 20150709 Ethan Johnson -SGN_gene 271 cf2 PO:0000003 PMID: 25774204 IMP A solyc06g008300 Cladosporium fulvum resistance-2 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1322 sp PO:0000003 PMID: 25774204 IMP A Solyc06g074350 self-pruning gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1068 not PO:0009025 PMID: 25774204 IMP A Solyc07g056570 notabilis gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1068 not PO:0000003 PMID: 25774204 IMP A Solyc07g056570 notabilis gene taxon:4081 20150709 Ethan Johnson -SGN_gene 483 etr2 PO:0020142 PMID: 25774204 IMP A Solyc07g056580 ethylene receptor 2 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 780 ls PO:0009006 PMID: 25774204 IMP A Solyc07g066250 lateral suppresser gene taxon:4081 20150709 Ethan Johnson -SGN_gene 780 ls PO:0009059 PMID: 25774204 IMP A Solyc07g066250 lateral suppresser gene taxon:4081 20150709 Ethan Johnson -SGN_gene 780 ls PO:0000003 PMID: 25774204 IMP A Solyc07g066250 lateral suppresser gene taxon:4081 20150709 Ethan Johnson -SGN_gene 661 gf PO:0009001 PMID: 25774204 IMP A Solyc08g080090 green flesh gene taxon:4081 20150709 Ethan Johnson -SGN_gene 762 lin5 PO:0009001 PMID: 25774204 IMP A Solyc09g010080 invertase 5 gene taxon:4081 20150709 Ethan Johnson -SGN_gene 1164 phyA PO:0000003 PMID: 25774204 IMP A Solyc10g044670 phytochrome A gene taxon:4081 20150710 Ethan Johnson -SGN_gene 111013 sun PO:0009001 PMID: 25774204 IMP A Solyc10g079240 sun gene taxon:4081 20150710 Ethan Johnson -SGN_gene 246 crtiso PO:0009001 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson -SGN_gene 246 crtiso PO:0009029 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson -SGN_gene 246 crtiso PO:0020144 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson -SGN_gene 246 crtiso PO:0009025 PMID: 25774204 IMP A Solyc10g081650 carotenoid isomerase gene taxon:4081 20150710 Ethan Johnson -SGN_gene 755 j PO:0000003 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson -SGN_gene 755 j PO:0020142 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson -SGN_gene 755 j PO:0009001 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson -SGN_gene 755 j PO:0009010 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson -SGN_gene 755 j PO:0000146 PMID: 25774204 IMP A Solyc11g010570 jointless gene taxon:4081 20150710 Ethan Johnson -SGN_gene 4504 GAI PO:0004709 PMID: 25774204 IMP A Solyc11g011260 GAI gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1187 ptox PO:0009025 PMID: 25774204 IMP A Solyc11g011990 plastid terminal oxidase gene taxon:4081 20150710 Ethan Johnson -SGN_gene 717 i2 PO:0000003 PMID: 25774204 IMP A Solyc11g071430 Immunity to Fusarium wilt race 2 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 538 fas PO:0025263 PMID: 25774204 IMP A Solyc11g071810 fasciated gene taxon:4081 20150710 Ethan Johnson -SGN_gene 538 fas PO:0009030 PMID: 25774204 IMP A Solyc11g071810 fasciated gene taxon:4081 20150710 Ethan Johnson -SGN_gene 391 del PO:0009001 PMID: 25774204 IMP A Solyc12g008980 Delta gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1605 yg2 PO:0009025 PMID: 25774204 IMP A Solyc12g009470 yellow-green-2 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1605 yg2 PO:0020100 PMID: 25774204 IMP A Solyc12g009470 yellow-green-2 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 482 etr1 PO:0020142 PMID: 25774204 IMP A Solyc12g011330 ethylene receptor 1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 277 cf9 PO:0000003 PMID: 25774204 IMP A AJ002236 Cladosporium fulvum resistance-9 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 687 hero PO:0000003 PMID: 25774204 IMP A AJ457051 Heterodera rostochiensis resistance gene taxon:4081 20150710 Ethan Johnson -SGN_gene 881 lc PO:0009072 PMID: 25774204 IMP A JF284938 Locule number gene taxon:4081 20150710 Ethan Johnson -SGN_gene 881 lc PO:0025263 PMID: 25774204 IMP A JF285116 Locule number gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1305 Mi1-2 PO:0000003 PMID: 25774204 IMP A SGN-U564276 Mi-1.2 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1345 sit PO:0000003 PMID: 25774204 IMP A HQ317907 sitiens gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1345 sit PO:0009025 PMID: 25774204 IMP A HQ317907 sitiens gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1345 tm2 PO:0000003 PMID: 25774204 IMP A AF536200 Tobacco mosaic virus resistance-2 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 111014 wo PO:0000282 PMID: 25774204 IMP A Solyc02g080490 Wooly gene taxon:4081 20150710 Ethan Johnson -SGN_gene 111014 wo PO:0000003 PMID: 25774204 IMP A Solyc02g080490 Wooly gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0020049 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0009046 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0009001 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0020139 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0009060 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0009049 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0000003 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0009047 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 212 bl PO:0009025 PMID: 25774204 IMP A Solyc11g069030 blind gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1045 nr PO:0009001 PMID: 25774204 IMP A Solyc09g075440 Never ripe gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1046 Nr2 PO:0025037 PMID: 25774204 IMP A Solyc09g075440 Never ripe-2 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 555 flc PO:0009025 PMID: 25774204 IMP A Solyc07g066480 flacca gene taxon:4081 20150710 Ethan Johnson -SGN_gene 555 flc PO:0000003 PMID: 25774204 IMP A Solyc07g066480 flacca gene taxon:4081 20150710 Ethan Johnson -SGN_gene 539 fer PO:0009025 PMID: 25774204 IMP A Solyc06g051550 fe inefficient gene taxon:4081 20150710 Ethan Johnson -SGN_gene 539 fer PO:0005352 PMID: 25774204 IMP A Solyc06g051550 fe inefficient gene taxon:4081 20150710 Ethan Johnson -SGN_gene 776 la PO:0020042 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson -SGN_gene 776 la PO:0009025 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson -SGN_gene 776 la PO:0009047 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson -SGN_gene 776 la PO:0025073 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson -SGN_gene 776 la PO:0009001 PMID: 25774204 IMP A Solyc07g062680 lanceolate gene taxon:4081 20150710 Ethan Johnson -SGN_gene 8229 GOB PO:0020042 PMID: 25774204 IMP A Solyc07g062840 goblet gene taxon:4081 20150710 Ethan Johnson -SGN_gene 8229 GOB PO:0020148 PMID: 25774204 IMP A Solyc07g062840 goblet gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1187 ptox PO:0009025 PMID: 25774204 IMP A Solyc11g011990 plastid terminal oxidase gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1465 APS1 PO:0009001 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1465 APS1 PO:0020127 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1465 APS1 PO:0009047 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1465 APS1 PO:0025508 PMID: 25774204 IMP G APS1 APS1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1465 APS1 PO:0000025 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1465 APS1 PO:0009025 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 1465 APS1 PO:0007131 PMID: 25774204 IMP A APS1 APS1 gene taxon:4081 20150710 Ethan Johnson -SGN_gene 20827 rdr6 PO:0009025 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson -SGN_gene 20827 rdr6 PO:0000003 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson -SGN_gene 20827 rdr6 PO:0009032 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson -SGN_gene 20827 rdr6 PO:0020039 PMID: 25774204 IMP A Solyc04g014870 wiry gene taxon:4081 20150710 Ethan Johnson \ No newline at end of file diff --git a/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc b/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc deleted file mode 100644 index 91276bd..0000000 --- a/po-associations/test_PPPP/PO_ontology_IMP_gene_soybean.assoc +++ /dev/null @@ -1,34 +0,0 @@ -SOY_gene Glyma01g36600 E2-1 PO:0007016 PMID: 25774204 IMP G Glyma01g36600 E2 gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma02g05450 Wp PO:0009046 PMID: 25774204 IMP A Glyma02g05450 Wp gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma02g05450 Wp PO:0009088 PMID: 25774204 IMP A Glyma02g05450 Wp gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma02g39230 GmFAD3-2 PO:0009010 PMID: 25774204 IMP A Glyma02g39230 FAD3-2 gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma03g32500 GmLPA1-1 PO:0009010 PMID: 25774204 IMP A Glyma03g32500 LPA1-1 gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma05g27840 Eu1-1 PO:0009009 PMID: 25774204 IMP A Glyma05g27840 ESU gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma06g18890.1 RS2 PO:0009010 PMID: 25774204 IMP A Glyma06g18890.1 Raffinose synthase gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma06g18890.1 RS1-2 PO:0009010 PMID: 25774204 IMP A Glyma06g18890.1 Raffinose synthase gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma06g19820 AMDH2 BADH2 PO:0009010 PMID: 25774204 IMP A Glyma06g19820 GmAMDH2 gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma06g21920 T PO:0000282 PMID: 25774204 IMP A Glyma06g21920 Tawny gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma06g21920 T PO:0020063 PMID: 25774204 IMP A Glyma06g21920 Tawny gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma08g06630 ANR1 PO:0009088 PMID: 25774204 IMP A Glyma08g06630 ANR1 gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma08g08970 Eu3-1 PO:0000003 PMID: 25774204 IMP A Glyma08g08970 GmUreG gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma09g36983 PO:0020063 PMID: 25774204 IMP A Glyma09g36983 R2R MYB Transcription Factor gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma09g36983 PO:0009088 PMID: 25774204 IMP A Glyma09g36983 R2R MYB Transcription Factor gene taxon:3847 20150716 Ethan Johnson -SOY_gene Glyma10g42470 GmFAD2-1 PO:0009010 PMID: 25774204 IMP A Glyma10g42470 FAD2-1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma11g27480 GmAS1-A PO:0009088 PMID: 25774204 IMP A Glyma11g27480 Asparagine synthase 1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma11g27480 GmAS1-A PO:0009010 PMID: 25774204 IMP A Glyma11g27480 Asparagine synthase 1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma11g37250 EU4-1 PO:0000003 PMID: 25774204 IMP A Glyma11g37250 UU gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma14g04380 Eu2-1 PO:0000003 PMID: 25774204 IMP A Glyma14g04380 GmUreF gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma14g09510 GmASPGB1-A PO:0009088 PMID: 25774204 IMP A Glyma14g09510 Asparaginase B1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma14g09510 GmASPGB1-A PO:0009010 PMID: 25774204 IMP A Glyma14g09510 Asparaginase B1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma14g27990 GmFAB2-3 PO:0009010 PMID: 25774204 IMP A Glyma14g27990 FAB2-3 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma14g37350 GmFAD3-1 PO:0009010 PMID: 25774204 IMP A Glyma14g37350 FAD3-1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma16g01980 GmLHY1 PO:0020100 PMID: 25774204 IMP A Glyma16g01980 MYB Transcription Factor gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma16g01980 GmLHY1 PO:0007016 PMID: 25774204 IMP G Glyma16g01980 MYB Transcription Factor gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma16g04830 GmFT5-A PO:0007016 PMID: 25774204 IMP G Glyma16g04830 FT-5A gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma16g26660 GmFT2-A PO:0007016 PMID: 25774204 IMP G Glyma16g26660 FT-2A gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma18g02210 MIPS1 PO:0007030 PMID: 25774204 IMP G Glyma18g02210 GmMIPS1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma18g06950 GmFAD3-3 PO:0009010 PMID: 25774204 IMP A Glyma18g06950 FAD3-3 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma19g35230 GmLPA1-2 PO:0009010 PMID: 25774204 IMP A Glyma19g35230 LPA1-2 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma20g24530 GmFAD2-2 PO:0009010 PMID: 25774204 IMP A Glyma20g24530 FAD2-2 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma20g25000 Ln PO:0020049 PMID: 25774204 IMP A Glyma20g25000 GmJagged1 gene taxon:3847 20150717 Ethan Johnson -SOY_gene Glyma20g25000 Ln PO:0000003 PMID: 25774204 IMP A Glyma20g25000 GmJagged1 gene taxon:3847 20150717 Ethan Johnson \ No newline at end of file