From: elserj <elserj@localhost>
Date: Fri, 31 May 2013 22:05:51 +0000 (+0000)
Subject: Added tomato
X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=5ba2a230b93b06ee9f8d504f33ec378adf46de22;p=old-jaiswallab-svn%2F.git

Added tomato

svn path=/; revision=483
---

diff --git a/interactome_scripts/find_species.pl b/interactome_scripts/find_species.pl
index b532dd9..4f23fb7 100755
--- a/interactome_scripts/find_species.pl
+++ b/interactome_scripts/find_species.pl
@@ -115,6 +115,8 @@ sub find_species {
 		$temp = "Selaginella_moellendorffii";
 	}elsif ($temp =~ /Solanum_tuberosum/) {
 			$temp = "Solanum_tuberosum";
+	}elsif ($temp =~ /Solanum_lycopersicum/) {
+			$temp = "Solanum_lycopersicum";
 	}elsif ($temp =~ /Sorghum/) {
 		$temp = "Sorghum_bicolor";
 	}elsif ($temp =~ /Synechocystis/) {
@@ -311,6 +313,9 @@ sub find_gene {
 	}elsif ($species eq "Solanum_tuberosum") {
 		my ($protein,$transcript,$type) = split(/\s/,$gene_header);
 		$gene = $protein;
+	}elsif ($species eq "Solanum_lycopersicum") {
+		my ($protein,$type,$location,$gene,$transcript) = split(/\s/,$gene_header);
+		$gene = $protein;
 	}elsif ($species eq "Sorghum_bicolor") {
 		my ($gene_id,$transcript_id) = split(/\|/,$gene_header);
 		$gene = $transcript_id;
@@ -423,6 +428,7 @@ sub all_species_array {
 	push (@spec_array, "Schizosaccharomyces_pombe");
 	push (@spec_array, "Selaginella_moellendorffii");
 	push (@spec_array, "Solanum_tuberosum");
+	push (@spec_array, "Solanum_lycopersicum");
 	push (@spec_array, "Sorghum_bicolor");
 	push (@spec_array, "Synechocystis_pcc6803");
 	push (@spec_array, "Takifugu_rubripes");