From: cooperl Date: Tue, 5 Nov 2024 22:05:35 +0000 (+0000) Subject: Fixed db IDs with "area" appended to them X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=75cd1e9b3bddd672b09d3a716ffe270665670b84;p=associations%2F.git Fixed db IDs with "area" appended to them svn path=/; revision=1118 --- diff --git a/po-associations/po_anatomy_gene_oryza_poc.assoc b/po-associations/po_anatomy_gene_oryza_poc.assoc index 710ef7a..5f2ee96 100644 --- a/po-associations/po_anatomy_gene_oryza_poc.assoc +++ b/po-associations/po_anatomy_gene_oryza_poc.assoc @@ -5447,7 +5447,7 @@ RAP-DB Os02g0298200 Os02g0298200 PO:0020039 DOI:10.1371/journal.pone.0026162 IE RAP-DB Os02g0298900 Os02g0298900 PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Non-protein coding transcript, uncharacterized transcript expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os02g0302500 Os02g0302500 PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein hypothetical protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os02g0304800 Os02g0304800 PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Protein prenyltransferase domain containing protein PPR repeat domain containing protein, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) -RAP-DB Os02g0306400area Os02g0306400area PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A OsNAAT1 mRNA for nicotianamine aminotransferase Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) +RAP-DB Os02g0306400 Os02g0306400 PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A OsNAAT1 mRNA for nicotianamine aminotransferase Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os02g0307300 Os02g0307300 PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene conserved hypothetical protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os02g0307800 Os02g0307800 PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Conserved hypothetical protein expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os02g0309600 Os02g0309600 PO:0020039 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Integrase, catalytic region domain containing protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007010)|participates_in(PO:0007134)|participates_in(PO:0007130) @@ -11452,14 +11452,14 @@ RAP-DB Os11g0542100 Os11g0542100 PO:0000032 DOI:10.1371/journal.pone.0026162 IE RAP-DB Os11g0547300 Os11g0547300 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0557400 Os11g0557400 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0560000 Os11g0560000 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hv1LRR2 disease resistance protein RPM1, putative gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) -RAP-DB Os11g0597400area Os11g0597400area PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) +RAP-DB Os11g0597400 Os11g0597400 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0600000 Os11g0600000 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Retrotransposon gag protein family protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0603000 Os11g0603000 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Basic helix-loop-helix dimerisation region bHLH domain containing protein helix-loop-helix DNA-binding domain containing protein, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0608000 Os11g0608000 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0625700 Os11g0625700 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0635000 Os11g0635000 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0643100 Os11g0643100 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Transferase family protein transferase family protein, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) -RAP-DB Os11g0645800area Os11g0645800area PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) +RAP-DB Os11g0645800 Os11g0645800 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0646300 Os11g0646300 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein Leucine Rich Repeat family protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0647000 Os11g0647000 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene retrotransposon protein, putative, unclassified gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) RAP-DB Os11g0661600 Os11g0661600 PO:0000032 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Peroxidase precursor (EC 11117) peroxidase precursor, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001029)|participates_in(PO:0007130) @@ -15659,7 +15659,7 @@ RAP-DB Os11g0638900 Os11g0638900 PO:0025281 DOI:10.1371/journal.pone.0026162 IE RAP-DB Os11g0640600 Os11g0640600 PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Disease resistance protein family protein Leucine Rich Repeat family protein, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) RAP-DB Os11g0640700 Os11g0640700 PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Bacterial luciferase-like family protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) RAP-DB Os11g0641200 Os11g0641200 PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Cyclin-like F-box domain containing protein F-box/LRR-repeat protein 3, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) -RAP-DB Os11g0647000area Os11g0647000area PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) +RAP-DB Os11g0647000 Os11g0647000 PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) RAP-DB Os11g0655100 Os11g0655100 PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Hypothetical protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) RAP-DB Os11g0656500 Os11g0656500 PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Viral coat and capsid protein family protein retrotransposon protein, putative, unclassified, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) RAP-DB Os11g0657400 Os11g0657400 PO:0025281 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Atrophin family protein retrotransposon protein, putative, unclassified gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0001015)|participates_in(PO:0007130) @@ -23466,7 +23466,7 @@ RAP-DB Os11g0582400 Os11g0582400 PO:0009009 DOI:10.1371/journal.pone.0026162 IE RAP-DB Os11g0585700 Os11g0585700 PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A 50S ribosomal protein L4 ribosomal protein L4, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) RAP-DB Os11g0590600 Os11g0590600 PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) RAP-DB Os11g0594200 Os11g0594200 PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Notchless-related notchless protein, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) -RAP-DB Os11g0598500area Os11g0598500area PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) +RAP-DB Os11g0598500 Os11g0598500 PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) RAP-DB Os11g0602400 Os11g0602400 PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A tRNA intron endonuclease, catalytic C-terminal domain containing protein tRNA-splicing endonuclease subunit Sen2, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) RAP-DB Os11g0602600 Os11g0602600 PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A 40S ribosomal protein S9 40S ribosomal protein S9-2, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) RAP-DB Os11g0605800 Os11g0605800 PO:0009009 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Non-protein coding transcript, uncharacterized transcript hypothetical protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007631)|participates_in(PO:0007042) @@ -29509,7 +29509,7 @@ RAP-DB Os11g0591800 Os11g0591800 PO:0009005 DOI:10.1371/journal.pone.0026162 IE RAP-DB Os11g0593000 Os11g0593000 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Phosphoesterase family protein phosphoesterase family protein, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0597400 Os11g0597400 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0598300 Os11g0598300 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A NB-ARC domain containing protein expressed protein gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) -RAP-DB Os11g0598300area Os11g0598300area PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) +RAP-DB Os11g0598300 Os11g0598300 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Expressed gene Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0606000 Os11g0606000 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Zn-finger, CCHC type domain containing protein Expressed gene gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0607900 Os11g0607900 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Protein kinase domain containing protein jacalin-like lectin domain containing protein, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130) RAP-DB Os11g0608300 Os11g0608300 PO:0009005 DOI:10.1371/journal.pone.0026162 IEP isolated_from_germplasm(Nipponbare) A Barley stem rust resistance protein cysteine-rich receptor-like protein kinase 7 precursor, putative, expressed gene taxon:39947 20121019 POC:Pankaj_Jaiswal participates_in(PO:0007134)|participates_in(PO:0007130)