From: cooperl Date: Tue, 7 Feb 2017 18:59:20 +0000 (+0000) Subject: Fixed missing data and other minor issues. Revised curatore name to Laurel Cooper X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=7a482bf8af08dfa07ee8a3cd74040ac396e9e0ae;p=associations%2F.git Fixed missing data and other minor issues. Revised curatore name to Laurel Cooper svn path=/; revision=819 --- diff --git a/to-associations/to_gene_G.max_PPPP.assoc b/to-associations/to_gene_G.max_PPPP.assoc index 03f762e..5924ee2 100644 --- a/to-associations/to_gene_G.max_PPPP.assoc +++ b/to-associations/to_gene_G.max_PPPP.assoc @@ -1,50 +1,50 @@ !DB DB_Object_ID DB_Object_Symbol Qualifier TOid DB:Reference Evidence With(or)From Aspect DB_Object_Name DB_Object_Synonym DB_Object_Type Taxon Date Assigned_by -SoyBase Glyma01g36600 E2-1 flowering time trait TO:0002616 PMID: 25774204 IMP T Glyma01g36600 Early flowering gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma02g05450 Wp flower color TO:0000537 PMID: 25774204 IMP T Glyma02g05450 Pink flowers gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma02g05450 Wp seed coat color TO:0000190 PMID: 25774204 IMP T Glyma02g05450 Seed coat Grey gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma02g39230 GmFAD3-2 oleic acid content TO:0005002 PMID: 25774204 IMP T Glyma02g39230 High seed oleic acid content gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma03g32500 GmLPA1-1 seed phosphorus content TO:0002666 PMID: 25774204 IMP Glyma03g32500 low phytic acid concentration in seeds gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma04g11010 GmCRY1 photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma04g11010 Late flowering under short day gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma04g11010 GmCRY1 blue light sensitivity TO:0000159 PMID: 25774204 IMP T Glyma04g11010 blue light insensitive gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma05g27840 Eu1-1 enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma05g27840 Embryo urease activity gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma06g18890.1 RS2 raffinose content TO:0006004 PMID: 25774204 IMP T Glyma06g18890.1 Seed raffinose concentration reduced gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma06g18890.1 RS2 enzyme activity trait TO:0000599 PMID: 25774204 IMP Glyma06g18890.1 Seed raffinose synthase activity reduced gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma06g18890.1 RS1-2 raffinose content TO:0006004 PMID: 25774204 IMP T Glyma06g18890.1 Seed raffinose concentration gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma06g18890.1 RS1-2 enzyme activity trait TO:0000599 PMID: 25774204 IMP Glyma06g18890.1 Seed raffinose synthase activity reduced gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma06g19820 AMDH2 BADH2 enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma06g19820 Seed amino aldehyde dehydrogenase activity reduced gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma06g19820 AMDH2 BADH2 PMID: 25774204 IMP Glyma06g19820 Seed 2-acetyl-1-pyroline conc. Increased gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma06g21920 T PMID: 25774204 IMP Glyma06g21920 Gray pubescence gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma06g21920 T PMID: 25774204 IMP Glyma06g21920 tan hilum gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma06g23026 E1-1 photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma06g23026 Early flowering under long days gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma06g23026 E1-1 photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma06g23026 Photoperiod insensitivity gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma08g06630 ANR1 enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma08g06630 Anthocyanin Reductase activitiy reduced gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma08g06630 ANR1 PMID: 25774204 IMP Glyma08g06630 Epicatechin conc. Increased gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma08g08970 Eu3-1 enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma08g08970 whole plant urease activity gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma09g36983 PMID: 25774204 IMP Glyma09g36983 Brown hilum gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma09g36983 seed coat color TO:0000190 PMID: 25774204 IMP T Glyma09g36983 Brown seed coat color gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma10g42470 GmFAD2-1 oleic acid content TO:0005002 PMID: 25774204 IMP T Glyma10g42470 High seed oleic acid content gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma11g27480 GmAS1-A enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma11g27480 High asparagine synthase activity in seed coats gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma11g27480 GmAS1-A endosperm storage protein content TO:0002653 PMID: 25774204 IMP T Glyma11g27480 High seed protein content gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma11g37250 EU4-1 enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma11g37250 Urease activity gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma14g04380 Eu2-1 enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma14g04380 whole plant urease activity gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma14g09510 GmASPGB1-A enzyme activity trait TO:0000599 PMID: 25774204 IMP T Glyma14g09510 High asparaginase activity in seed coats gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma14g09510 GmASPGB1-1 endosperm storage protein content TO:0002653 PMID: 25774204 IMP T Glyma14g09510 high seed protein content gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma14g27990 GmFAB2-3 stearic acid content TO:0005003 PMID: 25774204 IMP T Glyma14g27990 High seed stearic acid content gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma14g37350 GmFAD3-1 oleic acid content TO:0005002 PMID: 25774204 IMP T Glyma14g37350 High seed oleic acid content gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma16g01980 GmLHY1 seedling hypocotyl length TO:0006065 PMID: 25774204 IMP T Glyma16g01980 increased hypocotyl length gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma16g01980 GmLHY1 PMID: 25774204 IMP Glyma16g01980 Abnormal circadian rythmn gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma16g01980 GmLHY1 photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma16g01980 Delayed flowering under short-day regimen gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma16g04830 GmFT5-A photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma16g04830 Photoperiod insensitivity gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma16g04830 GmFT5-A flowering time trait TO:0002616 PMID: 25774204 IMP T Glyma16g04830 Early flowering gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma16g26660 GmFT2-A photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma16g26660 Photoperiod insensitivity gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma16g26660 GmFT2-A flowering time trait TO:0002616 PMID: 25774204 IMP T Glyma16g26660 Early flowering gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma18g02210 MIPS1 PMID: 25774204 IMP Glyma18g02210 emergence reduced gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma18g06950 GmFAD3-3 oleic acid content TO:0005002 PMID: 25774204 IMP T Glyma18g06950 High seed oleic acid content gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma19g35230 GmLPA1-2 PMID: 25774204 IMP Glyma19g35230 low phytic acid concentration in seeds gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma19g41210 E3-1 flowering time trait TO:0002616 PMID: 25774204 IMP T Glyma19g41210 Early flowering gene taxon:3847 20150717 Planteome:Ethan_Johnson -!SoyBase Glyma19g41210 E3-1 PMSID: 25774204 IMP Glyma19g41210 Reduced far-red photo-reception gene taxon:3847 20150717 Planteome:Ethan_Johnson -SoyBase Glyma20g22160 PhyA2 photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma20g22160 Photoperiod insensitivity gene taxon:3847 20150720 Planteome:Ethan_Johnson -SoyBase Glyma20g22160 PhyA2 photoperiod-sensitive flowering time trait TO:0000934 PMID: 25774204 IMP T Glyma20g22160 Late flowering in short day gene taxon:3847 20150720 Planteome:Ethan_Johnson -SoyBase Glyma20g24530 GmFAD2-2 oleic acid content TO:0005002 PMID: 25774204 IMP T Glyma20g24530 High seed oleic acid content gene taxon:3847 20150720 Planteome:Ethan_Johnson -SoyBase Glyma20g25000 Ln vascular leaf anatomy and morphology trait TO:0000419 PMID: 25774204 IMP T Glyma20g25000 narrow leaflet gene taxon:3847 20150720 Planteome:Ethan_Johnson -SoyBase Glyma20g25000 Ln seed number TO:0000445 PMID: 25774204 IMP T Glyma20g25000 Increased number of seeds per plant gene taxon:3847 20150720 Planteome:Ethan_Johnson \ No newline at end of file +SoyBase Glyma01g36600 E2-1 flowering time trait TO:0002616 PMID:25774204 IMP T Glyma01g36600 Early flowering gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma02g05450 Wp flower color TO:0000537 PMID:25774204 IMP T Glyma02g05450 Pink flowers gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma02g05450 Wp seed coat color TO:0000190 PMID:25774204 IMP T Glyma02g05450 Seed coat Grey gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma02g39230 GmFAD3-2 oleic acid content TO:0005002 PMID:25774204 IMP T Glyma02g39230 High seed oleic acid content gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma03g32500 GmLPA1-1 seed phosphorus content TO:0002666 PMID:25774204 IMP T Glyma03g32500 low phytic acid concentration in seeds gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma04g11010 GmCRY1 photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma04g11010 Late flowering under short day gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma04g11010 GmCRY1 blue light sensitivity TO:0000159 PMID:25774204 IMP T Glyma04g11010 blue light insensitive gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma05g27840 Eu1-1 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma05g27840 Embryo urease activity gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g18890.1 RS2 raffinose content TO:0006004 PMID:25774204 IMP T Glyma06g18890.1 Seed raffinose concentration reduced gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g18890.1 RS2 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma06g18890.1 Seed raffinose synthase activity reduced gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g18890.1 RS1-2 raffinose content TO:0006004 PMID:25774204 IMP T Glyma06g18890.1 Seed raffinose concentration gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g18890.1 RS1-2 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma06g18890.1 Seed raffinose synthase activity reduced gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g19820 AMDH2 BADH2 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma06g19820 Seed amino aldehyde dehydrogenase activity reduced gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g19820 AMDH2 BADH2 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma06g19820 Seed 2-acetyl-1-pyroline conc. Increased gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g21920 T trichome morphology trait TO:0000911 PMID:25774204 IMP T Glyma06g21920 Gray pubescence gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g21920 T hilum color TO:0000968 PMID:25774204 IMP T Glyma06g21920 tan hilum gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g23026 E1-1 photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma06g23026 Early flowering under long days gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma06g23026 E1-1 photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma06g23026 Photoperiod insensitivity gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma08g06630 ANR1 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma08g06630 Anthocyanin Reductase activitiy reduced gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma08g06630 ANR1 anthocyanin content TO:0000071Ê PMID:25774204 IMP T Glyma08g06630 Epicatechin conc. Increased gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma08g08970 Eu3-1 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma08g08970 whole plant urease activity gene taxon:3847 20150717 Planteome:Laurel_Cooper +!SoyBase Glyma09g36983 hilum color TO:0000968 PMID:25774204 IMP T Glyma09g36983 Brown hilum gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma09g36983 seed coat color TO:0000190 PMID:25774204 IMP T Glyma09g36983 Brown seed coat color gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma10g42470 GmFAD2-1 oleic acid content TO:0005002 PMID:25774204 IMP T Glyma10g42470 High seed oleic acid content gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma11g27480 GmAS1-A enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma11g27480 High asparagine synthase activity in seed coats gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma11g27480 GmAS1-A endosperm storage protein content TO:0002653 PMID:25774204 IMP T Glyma11g27480 High seed protein content gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma11g37250 EU4-1 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma11g37250 Urease activity gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma14g04380 Eu2-1 enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma14g04380 whole plant urease activity gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma14g09510 GmASPGB1-A enzyme activity trait TO:0000599 PMID:25774204 IMP T Glyma14g09510 High asparaginase activity in seed coats gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma14g09510 GmASPGB1-1 endosperm storage protein content TO:0002653 PMID:25774204 IMP T Glyma14g09510 high seed protein content gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma14g27990 GmFAB2-3 stearic acid content TO:0005003 PMID:25774204 IMP T Glyma14g27990 High seed stearic acid content gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma14g37350 GmFAD3-1 oleic acid content TO:0005002 PMID:25774204 IMP T Glyma14g37350 High seed oleic acid content gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma16g01980 GmLHY1 seedling hypocotyl length TO:0006065 PMID:25774204 IMP T Glyma16g01980 increased hypocotyl length gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma16g01980 GmLHY1 photoperiod sensitivity trait TO:0000229 PMID:25774204 IMP T Glyma16g01980 Abnormal circadian rythmn gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma16g01980 GmLHY1 photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma16g01980 Delayed flowering under short-day regimen gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma16g04830 GmFT5-A photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma16g04830 Photoperiod insensitivity gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma16g04830 GmFT5-A flowering time trait TO:0002616 PMID:25774204 IMP T Glyma16g04830 Early flowering gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma16g26660 GmFT2-A photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma16g26660 Photoperiod insensitivity gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma16g26660 GmFT2-A flowering time trait TO:0002616 PMID:25774204 IMP T Glyma16g26660 Early flowering gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma18g02210 MIPS1 seedling growth and development trait TO:0000949 PMID:25774204 IMP T Glyma18g02210 emergence reduced gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma18g06950 GmFAD3-3 oleic acid content TO:0005002 PMID:25774204 IMP T Glyma18g06950 High seed oleic acid content gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma19g35230 GmLPA1-2 seed phosphorus content TO:0002666 PMID:25774204 IMP T Glyma19g35230 low phytic acid concentration in seeds gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma19g41210 E3-1 flowering time trait TO:0002616 PMID:25774204 IMP T Glyma19g41210 Early flowering gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma19g41210 E3-1 far red light sensitivity TO:0000130 PMSID: 25774204 IMP T Glyma19g41210 Reduced far-red photo-reception gene taxon:3847 20150717 Planteome:Laurel_Cooper +SoyBase Glyma20g22160 PhyA2 photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma20g22160 Photoperiod insensitivity gene taxon:3847 20150720 Planteome:Laurel_Cooper +SoyBase Glyma20g22160 PhyA2 photoperiod-sensitive flowering time trait TO:0000934 PMID:25774204 IMP T Glyma20g22160 Late flowering in short day gene taxon:3847 20150720 Planteome:Laurel_Cooper +SoyBase Glyma20g24530 GmFAD2-2 oleic acid content TO:0005002 PMID:25774204 IMP T Glyma20g24530 High seed oleic acid content gene taxon:3847 20150720 Planteome:Laurel_Cooper +SoyBase Glyma20g25000 Ln vascular leaf anatomy and morphology trait TO:0000419 PMID:25774204 IMP T Glyma20g25000 narrow leaflet gene taxon:3847 20150720 Planteome:Laurel_Cooper +SoyBase Glyma20g25000 Ln seed number TO:0000445 PMID:25774204 IMP T Glyma20g25000 Increased number of seeds per plant gene taxon:3847 20150720 Planteome:Laurel_Cooper \ No newline at end of file