From: meiera Date: Sat, 12 Sep 2015 00:13:50 +0000 (+0000) Subject: Removed duplicate lines from TO_ontology_IMP_gene_M.truncatula.assoc X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=864f89e52403c9128c909f992c9983b397191699;p=associations%2F.git Removed duplicate lines from TO_ontology_IMP_gene_M.truncatula.assoc svn path=/; revision=544 --- diff --git a/to-associations/Test_PPPP_TO/TO_ontology_IMP_gene_M.truncatula.assoc b/to-associations/Test_PPPP_TO/TO_ontology_IMP_gene_M.truncatula.assoc index 8ae2115..ccc6ce8 100644 --- a/to-associations/Test_PPPP_TO/TO_ontology_IMP_gene_M.truncatula.assoc +++ b/to-associations/Test_PPPP_TO/TO_ontology_IMP_gene_M.truncatula.assoc @@ -1,139 +1,137 @@ -LIS Medtr5g030920 nork root nodule number TO:0000900 25774204 IMP AMT Medtr5g030920 Root nodules absent in presence of Nod factor gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g030920 nork root nodule number TO:0000900 25774204 IMP AMT Medtr5g030920 Root nodules absent in presence of the rhizobial Sinorhizobium meliloti gene taxon:3880 20150701 Ethan Johnson -LIS Medtr5g030920 nork 25774204 IMP Medtr5g030920 mycorrhizal symbioses absent gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g086130 LYK3 root nodule number TO:0000900 25774204 IMP AMT Medtr5g086130 root nodules absent gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g086130 LYK3 25774204 IMP Medtr5g086130 Infection thread aborted gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g086120 LYK4 root nodule number TO:0000900 25774204 IMP AMT Medtr5g086120 root nodules absent gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g086120 LYK4 25774204 IMP Medtr5g086120 Infection thread aborted gene taxon:3880 20150702 Ethan Johnson -LIS Medtr2g005870 DMI1 root nodule number TO:0000900 25774204 IMP AMT Medtr2g005870 root nodules absent gene taxon:3880 20150702 Ethan Johnson -LIS Medtr2g005870 DMI1 25774204 IMP Medtr2g005870 Infection thread aborted gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g043970 DMI3 root nodule number TO:0000900 25774204 IMP AMT Medtr8g043970 root nodule absent gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g043970 DMI3 25774204 IMP Medtr8g043970 mycorrhizal symbioses absent gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g022030 CDPK1 root hair length TO:0002665 25774204 IMP AMT Medtr5g022030 reduced root hair length gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g022030 CDPK1 root cortical cell length TO:0020108 25774204 IMP AMT Medtr5g022030 reduced root cell length gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g022030 CDPK1 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr5g022030 root nodulation decreased gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g022030 CDPK1 25774204 IMP Medtr5g022030 mycorrhizal symbioses decreased gene taxon:3880 20150702 Ethan Johnson -LIS Medtr6g071190 FCL1 vascular leaf anatomy and morphology trait TO:0000419 25774204 IMP AMT Medtr6g071190 Fused leaflets gene taxon:3880 20150702 Ethan Johnson -LIS Medtr6g071190 FCL1 petiole length TO:0000766 25774204 IMP AMT Medtr6g071190 Short petiole gene taxon:3880 20150702 Ethan Johnson -LIS Medtr6g071190 FCL1 25774204 IMP Medtr6g071190 Leaf rachis malformed gene taxon:3880 20150702 Ethan Johnson -LIS Medtr7g084970 FTa1 flowering time trait TO:0002616 25774204 IMP GDT Medtr7g084970 Delayed flowering gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106420 FLOT2 root nodule number TO:0000900 25774204 IMP AMT Medtr3g106420 Fewer nodules per plant gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106420 FLOT2 root nodule number 25774204 IMP Medtr3g106420 More no-nodule plants gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106420 FLOT2 25774204 IMP Medtr3g106420 A decrease in plants that form pink nodules gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106420 FLOT2 seminal root length TO:0000586 25774204 IMP AMT Medtr3g106420 Decreased primary root length gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106420 FLOT2 lateral root length TO:0001012 25774204 IMP AMT Medtr3g106420 Long primary lateral roots gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106420 FLOT2 25774204 IMP Medtr3g106420 reduced acetylene reduction gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106420 FLOT2 25774204 IMP Medtr3g106420 Decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106480 FLOT3 root length TO:0000227 25774204 IMP AMT Medtr3g106480 Decreased root length gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106480 FLOT3 root weight TO:0000279 25774204 IMP AMT Medtr3g106480 Reduced root weight gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106430 FLOT4 root nodule number TO:0000900 25774204 IMP AMT Medtr3g106430 Fewer nodules per plant gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 A decrease in plants that form pink nodules gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106430 FLOT4 root number TO:0000084 25774204 IMP AMT Medtr3g106430 Increased secondary roots gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 reduced acetylene reduction gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson -LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 aborted infection threads gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g014400 PALM1 leaf anatomy and morphology trait TO:0000748 25774204 IMP AMT Medtr5g014400 Forms dissected leaves gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g014400 PALM1 leaf anatomy and morphology trait TO:0000748 25774204 IMP AMT Medtr5g014400 Palmate-like pentafoliate leaves gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g014400 PALM1 25774204 IMP Medtr5g014400 Distal lateral leaflets develop similarly to terminal leaflets gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g014400 PALM1 petiole length TO:0000766 25774204 IMP AMT Medtr5g014400 Petiole length increased gene taxon:3880 20150702 Ethan Johnson -LIS Medtr5g014400 PALM1 25774204 IMP Medtr5g014400 Rachis length decreased gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g084140 MtNAP1 root nodule number TO:0000900 25774204 IMP AMT Medtr4g084140 Fewer root nodules gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g084140 MtNAP1 25774204 IMP Medtr4g084140 reduced acetylene reduction gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g084140 MtNAP1 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr4g084140 root nodules undeveloped and small gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g084140 MtNAP1 25774204 IMP Medtr4g084140 aborted infection threads gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g084140 MtNAP1 25774204 IMP Medtr4g084140 decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g084140 MtNAP1 enzyme activity trait TO:0000599 25774204 IMP BT Medtr4g084140 low nitrogenase activity in nodules gene taxon:3880 20150702 Ethan Johnson +LIS ABE72958.1 CPK3 root nodule number TO:0000900 25774204 IMP AMT ABE72958.1 Increased number of root nodules gene taxon:3880 20150706 Ethan Johnson +LIS ADC33495.1 VPY 25774204 IMP ADC33495.1 Aborted mycorrhizae formation gene taxon:3880 20150706 Ethan Johnson +LIS ADC33495.1 VPY 25774204 IMP ADC33495.1 Rhizobial Infection thread abnormal gene taxon:3880 20150706 Ethan Johnson +LIS ADC33495.1 VPY root nodule number TO:0000900 25774204 IMP AMT ADC33495.1 root nodulation decreased gene taxon:3880 20150706 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 Ovules exposed by unfused carpel edges gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 abnomal ovules gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 either sepal-like or petal-like structures gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 fewer ovules gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 fused whorl of stamens and petals gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 seed pods absent gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 small carpel gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 small flowers gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 stigma sometimes absent gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 style sometimes absent gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM carpel anatomy and morphology trait TO:0006012 25774204 IMP AMT AFI56799.1 abnormal carpel gene taxon:3880 20150702 Ethan Johnson LIS AFI56799.1 NAM cotyledon anatomy and morphology trait TO:0000749 25774204 IMP AMT AFI56799.1 fused cotyledons gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM shoot apical meristem development TO:0006020 25774204 IMP GDT AFI56799.1 aborted shoot apical meristem gene taxon:3880 20150702 Ethan Johnson LIS AFI56799.1 NAM embryo shape TO:0000193 25774204 IMP AMT AFI56799.1 cylindrical embryos gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM vascular leaf anatomy and morphology trait TO:0000419 25774204 IMP AMT AFI56799.1 fused leaflets gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 small flowers gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 seed pods absent gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM male sterility TO:0000437 25774204 IMP SFT AFI56799.1 sterile stamens gene taxon:3880 20150702 Ethan Johnson LIS AFI56799.1 NAM female sterility TO:0000358 25774204 IMP SFT AFI56799.1 sterile carpels gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 fused whorl of stamens and petals gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 either sepal-like or petal-like structures gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 small carpel gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 Ovules exposed by unfused carpel edges gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM male sterility TO:0000437 25774204 IMP SFT AFI56799.1 sterile stamens gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM shoot apical meristem development TO:0006020 25774204 IMP GDT AFI56799.1 aborted shoot apical meristem gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM stamen anatomy and morphology trait TO:0000215 25774204 IMP AMT AFI56799.1 abnormal stamen gene taxon:3880 20150702 Ethan Johnson LIS AFI56799.1 NAM trichome anatomy and morphology trait TO:0000911 25774204 IMP AMT AFI56799.1 abnormal carpel trichomes gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 style sometimes absent gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 stigma sometimes absent gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 fewer ovules gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM 25774204 IMP AFI56799.1 abnomal ovules gene taxon:3880 20150702 Ethan Johnson +LIS AFI56799.1 NAM vascular leaf anatomy and morphology trait TO:0000419 25774204 IMP AMT AFI56799.1 fused leaflets gene taxon:3880 20150702 Ethan Johnson LIS AFI56799.1 NAM vascular leaf anatomy and morphology trait TO:0000419 25774204 IMP AMT AFI56799.1 malformed juvenile vascular leaves gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM stamen anatomy and morphology trait TO:0000215 25774204 IMP AMT AFI56799.1 abnormal stamen gene taxon:3880 20150702 Ethan Johnson -LIS AFI56799.1 NAM carpel anatomy and morphology trait TO:0006012 25774204 IMP AMT AFI56799.1 abnormal carpel gene taxon:3880 20150702 Ethan Johnson -LIS Medtr1g090320 LIN 25774204 IMP Medtr1g090320 decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson +LIS CAD48198.1 ENOD40 tissue development trait TO:0006015 25774204 IMP GDT CAD48198.1 Abnormal tissue development gene taxon:3880 20150706 Ethan Johnson +LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 Arbuscle formation decreased gene taxon:3880 20150706 Ethan Johnson +LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 Arbuscle structure normal gene taxon:3880 20150706 Ethan Johnson +LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 Reduced root Jasmonic Acid levels gene taxon:3880 20150706 Ethan Johnson +LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 mycorrhizae delayed colonization gene taxon:3880 20150706 Ethan Johnson +LIS CAR57918.1 MtCCD1 25774204 IMP CAR57918.1 Degenerate arbuscles gene taxon:3880 20150706 Ethan Johnson +LIS CAR57918.1 MtCCD1 carotene content TO:0000289 25774204 IMP AMT CAR57918.1 Apocarotenoid levels abnormal in roots gene taxon:3880 20150706 Ethan Johnson +LIS Medtr1g056530 HAP2.1 25774204 IMP Medtr1g056530 nonfunctional root nodules gene taxon:3880 20150706 Ethan Johnson +LIS Medtr1g056530 HAP2.1 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr1g056530 small root nodules gene taxon:3880 20150706 Ethan Johnson LIS Medtr1g090320 LIN 25774204 IMP Medtr1g090320 aborted infection threads gene taxon:3880 20150702 Ethan Johnson +LIS Medtr1g090320 LIN 25774204 IMP Medtr1g090320 decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson LIS Medtr1g090320 LIN 25774204 IMP Medtr1g090320 nodule development arrested gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g070970 SUNN root length TO:0000227 25774204 IMP AMT Medtr4g070970 short roots gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g070970 SUNN root nodule number TO:0000900 25774204 IMP AMT Medtr4g070970 increased number of root nodules gene taxon:3880 20150702 Ethan Johnson -LIS Medtr4g070970 SUNN 25774204 IMP Medtr4g070970 nodulation under high nitrogen gene taxon:3880 20150702 Ethan Johnson +LIS Medtr1g101600 CBF4 root length TO:0000227 25774204 IMP AMT Medtr1g101600 Higher Primary root length gene taxon:3880 20150706 Ethan Johnson +LIS Medtr1g101600 CBF4 salt tolerance TO:0006001 25774204 IMP ST Medtr1g101600 Salt-stress tolerance increased gene taxon:3880 20150706 Ethan Johnson +LIS Medtr2g005870 DMI1 25774204 IMP Medtr2g005870 Infection thread aborted gene taxon:3880 20150702 Ethan Johnson +LIS Medtr2g005870 DMI1 root nodule number TO:0000900 25774204 IMP AMT Medtr2g005870 root nodules absent gene taxon:3880 20150702 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) 25774204 IMP Medtr2g035020 Increased isoflavones in roots gene taxon:3880 20150706 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) 25774204 IMP Medtr2g035020 Reduced saponins in roots gene taxon:3880 20150706 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) germination rate TO:0000430 25774204 IMP SVT Medtr2g035020 Seed germination delayed gene taxon:3880 20150706 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) plant structure growth and development trait TO:0000928 25774204 IMP GDT Medtr2g035020 Plant growth stunted gene taxon:3880 20150706 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) root branching TO:0000257 25774204 IMP AMT Medtr2g035020 Roots less branched gene taxon:3880 20150706 Ethan Johnson +LIS Medtr2g035020 GT3 (UGT73F3) root length TO:0000227 25774204 IMP AMT Medtr2g035020 Roots short gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g021350 cyp716A12 25774204 IMP Medtr3g021350 Impaired hemolytic saponin synthesis gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g021350 cyp716A12 plant structure growth and development trait TO:0000928 25774204 IMP GDT Medtr3g021350 Plant growth stunted gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g098560 SGL1 flower anatomy and morphology trait TO:0000499 25774204 IMP AMT Medtr3g098560 fused flowers gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g098560 SGL1 leaf shape TO:0000492 25774204 IMP AMT Medtr3g098560 simple, unifoliate (not compound) leaves gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g098560 SGL1 petiole length TO:0000766 25774204 IMP AMT Medtr3g098560 Short petiole gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g099620 bHLH1 25774204 IMP Medtr3g099620 Nodulation delayed gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g099620 bHLH1 plant organ growth and development trait TO:0000927 25774204 IMP GDT Medtr3g099620 reduced growth of aboveground plant organs gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g099620 bHLH1 vascular bundle development trait TO:0020109 25774204 IMP GDT Medtr3g099620 Assymetrical development of nodule vascular bundles gene taxon:3880 20150706 Ethan Johnson +LIS Medtr3g106420 FLOT2 25774204 IMP Medtr3g106420 A decrease in plants that form pink nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106420 FLOT2 25774204 IMP Medtr3g106420 Decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106420 FLOT2 25774204 IMP Medtr3g106420 reduced acetylene reduction gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106420 FLOT2 lateral root length TO:0001012 25774204 IMP AMT Medtr3g106420 Long primary lateral roots gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106420 FLOT2 root nodule number 25774204 IMP Medtr3g106420 More no-nodule plants gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106420 FLOT2 root nodule number TO:0000900 25774204 IMP AMT Medtr3g106420 Fewer nodules per plant gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106420 FLOT2 seminal root length TO:0000586 25774204 IMP AMT Medtr3g106420 Decreased primary root length gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 A decrease in plants that form pink nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 aborted infection threads gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106430 FLOT4 25774204 IMP Medtr3g106430 reduced acetylene reduction gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106430 FLOT4 root nodule number TO:0000900 25774204 IMP AMT Medtr3g106430 Fewer nodules per plant gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106430 FLOT4 root number TO:0000084 25774204 IMP AMT Medtr3g106430 Increased secondary roots gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106480 FLOT3 root length TO:0000227 25774204 IMP AMT Medtr3g106480 Decreased root length gene taxon:3880 20150702 Ethan Johnson +LIS Medtr3g106480 FLOT3 root weight TO:0000279 25774204 IMP AMT Medtr3g106480 Reduced root weight gene taxon:3880 20150702 Ethan Johnson LIS Medtr4g070970 SUNN 25774204 IMP Medtr4g070970 Wild type nodulation response to ethylene gene taxon:3880 20150702 Ethan Johnson LIS Medtr4g070970 SUNN 25774204 IMP Medtr4g070970 nodulation occurs in abnormal places on root gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g106150 MtCre1 cytokinin sensitivity TO:0000167 25774204 IMP ST Medtr8g106150 root growth not inhibited by cytokinins gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g106150 MtCre1 25774204 IMP Medtr8g106150 cytokinin response gene not induced by cytokinins gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g106150 MtCre1 root number TO:0000084 25774204 IMP AMT Medtr8g106150 Increased secondary roots gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g106150 MtCre1 root nodule number TO:0000900 25774204 IMP AMT Medtr8g106150 Fewer root nodules gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g106150 MtCre1 25774204 IMP Medtr8g106150 arrested root nodule development gene taxon:3880 20150702 Ethan Johnson -LIS Medtr8g106150 MtCre1 25774204 IMP Medtr8g106150 aborted infection threads gene taxon:3880 20150702 Ethan Johnson -LIS Medtr7g101410 Skl1 root nodule number TO:0000900 25774204 IMP AMT Medtr7g101410 Absence of nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g070970 SUNN 25774204 IMP Medtr4g070970 nodulation under high nitrogen gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g070970 SUNN root length TO:0000227 25774204 IMP AMT Medtr4g070970 short roots gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g070970 SUNN root nodule number TO:0000900 25774204 IMP AMT Medtr4g070970 increased number of root nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g084140 MtNAP1 25774204 IMP Medtr4g084140 aborted infection threads gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g084140 MtNAP1 25774204 IMP Medtr4g084140 decreased rhizobial infection gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g084140 MtNAP1 25774204 IMP Medtr4g084140 reduced acetylene reduction gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g084140 MtNAP1 enzyme activity trait TO:0000599 25774204 IMP BT Medtr4g084140 low nitrogenase activity in nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g084140 MtNAP1 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr4g084140 root nodules undeveloped and small gene taxon:3880 20150702 Ethan Johnson +LIS Medtr4g084140 MtNAP1 root nodule number TO:0000900 25774204 IMP AMT Medtr4g084140 Fewer root nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g011250 ANS 25774204 IMP Medtr5g011250 Reduced seed Oligomeric proanthocyanidin levels gene taxon:3880 20150706 Ethan Johnson +LIS Medtr5g011250 ANS anthocyanin content TO:0000071 25774204 IMP BT Medtr5g011250 Reduced leaf Anthocyanin levels gene taxon:3880 20150706 Ethan Johnson +LIS Medtr5g014400 PALM1 25774204 IMP Medtr5g014400 Distal lateral leaflets develop similarly to terminal leaflets gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g014400 PALM1 25774204 IMP Medtr5g014400 Rachis length decreased gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g014400 PALM1 leaf anatomy and morphology trait TO:0000748 25774204 IMP AMT Medtr5g014400 Forms dissected leaves gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g014400 PALM1 leaf anatomy and morphology trait TO:0000748 25774204 IMP AMT Medtr5g014400 Palmate-like pentafoliate leaves gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g014400 PALM1 petiole length TO:0000766 25774204 IMP AMT Medtr5g014400 Petiole length increased gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g019040 NFP 25774204 IMP Medtr5g019040 Infection thread aborted gene taxon:3880 20150706 Ethan Johnson +LIS Medtr5g019040 NFP 25774204 IMP Medtr5g019040 root nodules absent gene taxon:3880 20150706 Ethan Johnson +LIS Medtr5g022030 CDPK1 25774204 IMP Medtr5g022030 mycorrhizal symbioses decreased gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g022030 CDPK1 root cortical cell length TO:0020108 25774204 IMP AMT Medtr5g022030 reduced root cell length gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g022030 CDPK1 root hair length TO:0002665 25774204 IMP AMT Medtr5g022030 reduced root hair length gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g022030 CDPK1 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr5g022030 root nodulation decreased gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g026850 CYCLOPS 25774204 IMP Medtr5g026850 inhibited mycorrhizal infection gene taxon:3880 20150706 Ethan Johnson +LIS Medtr5g026850 CYCLOPS 25774204 IMP Medtr5g026850 inhibited rhizobial infection gene taxon:3880 20150706 Ethan Johnson +LIS Medtr5g026850 CYCLOPS root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr5g026850 arrested nodule development gene taxon:3880 20150706 Ethan Johnson +LIS Medtr5g030920 nork 25774204 IMP Medtr5g030920 mycorrhizal symbioses absent gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g030920 nork root nodule number TO:0000900 25774204 IMP AMT Medtr5g030920 Root nodules absent in presence of Nod factor gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g030920 nork root nodule number TO:0000900 25774204 IMP AMT Medtr5g030920 Root nodules absent in presence of the rhizobial Sinorhizobium meliloti gene taxon:3880 20150701 Ethan Johnson +LIS Medtr5g086120 LYK4 25774204 IMP Medtr5g086120 Infection thread aborted gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g086120 LYK4 root nodule number TO:0000900 25774204 IMP AMT Medtr5g086120 root nodules absent gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g086130 LYK3 25774204 IMP Medtr5g086130 Infection thread aborted gene taxon:3880 20150702 Ethan Johnson +LIS Medtr5g086130 LYK3 root nodule number TO:0000900 25774204 IMP AMT Medtr5g086130 root nodules absent gene taxon:3880 20150702 Ethan Johnson +LIS Medtr6g071190 FCL1 25774204 IMP Medtr6g071190 Leaf rachis malformed gene taxon:3880 20150702 Ethan Johnson +LIS Medtr6g071190 FCL1 petiole length TO:0000766 25774204 IMP AMT Medtr6g071190 Short petiole gene taxon:3880 20150702 Ethan Johnson +LIS Medtr6g071190 FCL1 vascular leaf anatomy and morphology trait TO:0000419 25774204 IMP AMT Medtr6g071190 Fused leaflets gene taxon:3880 20150702 Ethan Johnson +LIS Medtr7g084970 FTa1 flowering time trait TO:0002616 25774204 IMP GDT Medtr7g084970 Delayed flowering gene taxon:3880 20150702 Ethan Johnson +LIS Medtr7g085040 FTc flower development trait TO:0000622 25774204 IMP GDT Medtr7g085040 Flower development normal under long days gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g085810 ERN 25774204 IMP Medtr7g085810 Rhizobial colonization blocked gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g085810 ERN 25774204 IMP Medtr7g085810 Signal transduction for nodulation blocked gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 Reduced autocatylic ethylene production gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 Reduced inhibition of root growth in response to application of exogenous cytokinin benzyl adenine gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 increased mycorrhizal infections gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 increased pathogenic fungal damage gene taxon:3880 20150706 Ethan Johnson LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 increased persistant rhizobia infection gene taxon:3880 20150702 Ethan Johnson LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 radial swelling of primary infection zone gene taxon:3880 20150702 Ethan Johnson -LIS Medtr7g101410 Skl1 seedling cotyledon size TO:0000752 25774204 IMP AMT Medtr7g101410 large cotyledons gene taxon:3880 20150702 Ethan Johnson -LIS Medtr7g101410 Skl1 hypocotyl anatomy and morphology trait TO:0000757 25774204 IMP AMT Medtr7g101410 reduced apical hook angle gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g101410 Skl1 root hair length TO:0002665 25774204 IMP AMT Medtr7g101410 reduced ectopic root hairs gene taxon:3880 20150706 Ethan Johnson LIS Medtr7g101410 Skl1 gravity response trait TO:0002693 25774204 IMP ST Medtr7g101410 No loss of geotropism gene taxon:3880 20150706 Ethan Johnson LIS Medtr7g101410 Skl1 hypocotyl anatomy and morphology trait TO:0000757 25774204 IMP AMT Medtr7g101410 lack of inhibition of hypocotyl growth gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g101410 Skl1 hypocotyl anatomy and morphology trait TO:0000757 25774204 IMP AMT Medtr7g101410 reduced apical hook angle gene taxon:3880 20150706 Ethan Johnson LIS Medtr7g101410 Skl1 root development trait TO:0000656 25774204 IMP GDT Medtr7g101410 lack of inhibition of root growth gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 Reduced inhibition of root growth in response to application of exogenous cytokinin benzyl adenine gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 increased mycorrhizal infections gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 increased pathogenic fungal damage gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g101410 Skl1 25774204 IMP Medtr7g101410 Reduced autocatylic ethylene production gene taxon:3880 20150706 Ethan Johnson -LIS Medtr1g056530 HAP2.1 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr1g056530 small root nodules gene taxon:3880 20150706 Ethan Johnson -LIS Medtr1g056530 HAP2.1 25774204 IMP Medtr1g056530 nonfunctional root nodules gene taxon:3880 20150706 Ethan Johnson -LIS Medtr5g026850 CYCLOPS 25774204 IMP Medtr5g026850 inhibited rhizobial infection gene taxon:3880 20150706 Ethan Johnson -LIS Medtr5g026850 CYCLOPS 25774204 IMP Medtr5g026850 inhibited mycorrhizal infection gene taxon:3880 20150706 Ethan Johnson -LIS Medtr5g026850 CYCLOPS root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr5g026850 arrested nodule development gene taxon:3880 20150706 Ethan Johnson -LIS Medtr5g019040 NFP 25774204 IMP Medtr5g019040 root nodules absent gene taxon:3880 20150706 Ethan Johnson -LIS Medtr5g019040 NFP 25774204 IMP Medtr5g019040 Infection thread aborted gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g098560 SGL1 leaf shape TO:0000492 25774204 IMP AMT Medtr3g098560 simple, unifoliate (not compound) leaves gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g098560 SGL1 petiole length TO:0000766 25774204 IMP AMT Medtr3g098560 Short petiole gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g098560 SGL1 flower anatomy and morphology trait TO:0000499 25774204 IMP AMT Medtr3g098560 fused flowers gene taxon:3880 20150706 Ethan Johnson -LIS Medtr5g011250 ANS anthocyanin content TO:0000071 25774204 IMP BT Medtr5g011250 Reduced leaf Anthocyanin levels gene taxon:3880 20150706 Ethan Johnson -LIS Medtr5g011250 ANS 25774204 IMP Medtr5g011250 Reduced seed Oligomeric proanthocyanidin levels gene taxon:3880 20150706 Ethan Johnson -LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 Reduced root Jasmonic Acid levels gene taxon:3880 20150706 Ethan Johnson -LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 mycorrhizae delayed colonization gene taxon:3880 20150706 Ethan Johnson -LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 Arbuscle formation decreased gene taxon:3880 20150706 Ethan Johnson -LIS CAI29046.1 MtAOC 25774204 IMP CAI29046.1 Arbuscle structure normal gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g099620 bHLH1 vascular bundle development trait TO:0020109 25774204 IMP GDT Medtr3g099620 Assymetrical development of nodule vascular bundles gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g099620 bHLH1 plant organ growth and development trait TO:0000927 25774204 IMP GDT Medtr3g099620 reduced growth of aboveground plant organs gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g099620 bHLH1 25774204 IMP Medtr3g099620 Nodulation delayed gene taxon:3880 20150706 Ethan Johnson -LIS Medtr1g101600 CBF4 root length TO:0000227 25774204 IMP AMT Medtr1g101600 Higher Primary root length gene taxon:3880 20150706 Ethan Johnson -LIS Medtr1g101600 CBF4 salt tolerance TO:0006001 25774204 IMP ST Medtr1g101600 Salt-stress tolerance increased gene taxon:3880 20150706 Ethan Johnson -LIS CAR57918.1 MtCCD1 carotene content TO:0000289 25774204 IMP AMT CAR57918.1 Apocarotenoid levels abnormal in roots gene taxon:3880 20150706 Ethan Johnson -LIS CAR57918.1 MtCCD1 25774204 IMP CAR57918.1 Degenerate arbuscles gene taxon:3880 20150706 Ethan Johnson -LIS Medtr8g058380 CDC16 lateral root length TO:0001012 25774204 IMP AMT Medtr8g058380 Decreased lateral roots gene taxon:3880 20150706 Ethan Johnson -LIS Medtr8g058380 CDC16 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr8g058380 Increased nodules gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g101410 Skl1 root hair length TO:0002665 25774204 IMP AMT Medtr7g101410 reduced ectopic root hairs gene taxon:3880 20150706 Ethan Johnson +LIS Medtr7g101410 Skl1 root nodule number TO:0000900 25774204 IMP AMT Medtr7g101410 Absence of nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr7g101410 Skl1 seedling cotyledon size TO:0000752 25774204 IMP AMT Medtr7g101410 large cotyledons gene taxon:3880 20150702 Ethan Johnson +LIS Medtr8g020200 ELF4 25774204 IMP Medtr8g020200 Circadian rhythm abnormal gene taxon:3880 20150706 Ethan Johnson +LIS Medtr8g043970 DMI3 25774204 IMP Medtr8g043970 mycorrhizal symbioses absent gene taxon:3880 20150702 Ethan Johnson +LIS Medtr8g043970 DMI3 root nodule number TO:0000900 25774204 IMP AMT Medtr8g043970 root nodule absent gene taxon:3880 20150702 Ethan Johnson LIS Medtr8g058380 CDC16 auxin sensitivity TO:0000163 25774204 IMP ST Medtr8g058380 Reduced auxin sensitivity by roots gene taxon:3880 20150706 Ethan Johnson -LIS Medtr8g058380 CDC16 lateral root length TO:0001012 25774204 IMP AMT Medtr8g058380 Decreased lateral roots gene taxon:3880 20150706 Ethan Johnson +LIS Medtr8g058380 CDC16 root nodule anatomy and morphology trait TO:0000898 25774204 IMP AMT Medtr8g058380 Increased nodules gene taxon:3880 20150706 Ethan Johnson LIS Medtr8g058710 chitIII-3 25774204 IMP Medtr8g058710 Increased fungal spore germination gene taxon:3880 20150706 Ethan Johnson -LIS Medtr8g058710 chitIII-3 25774204 IMP Medtr8g058710 Increased mycorrhizal infections gene taxon:3880 20150706 Ethan Johnson LIS Medtr8g058710 chitIII-3 25774204 IMP Medtr8g058710 Increased fungal spore production gene taxon:3880 20150706 Ethan Johnson -LIS ABE72958.1 CPK3 root nodule number TO:0000900 25774204 IMP AMT ABE72958.1 Increased number of root nodules gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g021350 cyp716A12 25774204 IMP Medtr3g021350 Impaired hemolytic saponin synthesis gene taxon:3880 20150706 Ethan Johnson -LIS Medtr3g021350 cyp716A12 plant structure growth and development trait TO:0000928 25774204 IMP GDT Medtr3g021350 Plant growth stunted gene taxon:3880 20150706 Ethan Johnson -LIS Medtr8g020200 ELF4 25774204 IMP Medtr8g020200 Circadian rhythm abnormal gene taxon:3880 20150706 Ethan Johnson -LIS CAD48198.1 ENOD40 tissue development trait TO:0006015 25774204 IMP GDT CAD48198.1 Abnormal tissue development gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g085810 ERN 25774204 IMP Medtr7g085810 Rhizobial colonization blocked gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g085810 ERN 25774204 IMP Medtr7g085810 Signal transduction for nodulation blocked gene taxon:3880 20150706 Ethan Johnson -LIS Medtr7g085040 FTc flower development trait TO:0000622 25774204 IMP GDT Medtr7g085040 Flower development normal under long days gene taxon:3880 20150706 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) plant structure growth and development trait TO:0000928 25774204 IMP GDT Medtr2g035020 Plant growth stunted gene taxon:3880 20150706 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) germination rate TO:0000430 25774204 IMP SVT Medtr2g035020 Seed germination delayed gene taxon:3880 20150706 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) root length TO:0000227 25774204 IMP AMT Medtr2g035020 Roots short gene taxon:3880 20150706 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) root branching TO:0000257 25774204 IMP AMT Medtr2g035020 Roots less branched gene taxon:3880 20150706 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) 25774204 IMP Medtr2g035020 Reduced saponins in roots gene taxon:3880 20150706 Ethan Johnson -LIS Medtr2g035020 GT3 (UGT73F3) 25774204 IMP Medtr2g035020 Increased isoflavones in roots gene taxon:3880 20150706 Ethan Johnson -LIS ADC33495.1 VPY 25774204 IMP ADC33495.1 Rhizobial Infection thread abnormal gene taxon:3880 20150706 Ethan Johnson -LIS ADC33495.1 VPY root nodule number TO:0000900 25774204 IMP AMT ADC33495.1 root nodulation decreased gene taxon:3880 20150706 Ethan Johnson -LIS ADC33495.1 VPY 25774204 IMP ADC33495.1 Aborted mycorrhizae formation gene taxon:3880 20150706 Ethan Johnson \ No newline at end of file +LIS Medtr8g058710 chitIII-3 25774204 IMP Medtr8g058710 Increased mycorrhizal infections gene taxon:3880 20150706 Ethan Johnson +LIS Medtr8g106150 MtCre1 25774204 IMP Medtr8g106150 aborted infection threads gene taxon:3880 20150702 Ethan Johnson +LIS Medtr8g106150 MtCre1 25774204 IMP Medtr8g106150 arrested root nodule development gene taxon:3880 20150702 Ethan Johnson +LIS Medtr8g106150 MtCre1 25774204 IMP Medtr8g106150 cytokinin response gene not induced by cytokinins gene taxon:3880 20150702 Ethan Johnson +LIS Medtr8g106150 MtCre1 cytokinin sensitivity TO:0000167 25774204 IMP ST Medtr8g106150 root growth not inhibited by cytokinins gene taxon:3880 20150702 Ethan Johnson +LIS Medtr8g106150 MtCre1 root nodule number TO:0000900 25774204 IMP AMT Medtr8g106150 Fewer root nodules gene taxon:3880 20150702 Ethan Johnson +LIS Medtr8g106150 MtCre1 root number TO:0000084 25774204 IMP AMT Medtr8g106150 Increased secondary roots gene taxon:3880 20150702 Ethan Johnson