From: elserj Date: Fri, 6 Jan 2012 22:13:55 +0000 (+0000) Subject: Replace gramene obsolete associations to updated PO terms X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=d47d2192140429e358da98a88d2c46f29abfd5e6;p=associations%2F.git Replace gramene obsolete associations to updated PO terms svn path=/; revision=282 --- diff --git a/po-associations/po_anatomy_gene_oryza_gramene.assoc b/po-associations/po_anatomy_gene_oryza_gramene.assoc index 388e5e7..d05fbce 100644 --- a/po-associations/po_anatomy_gene_oryza_gramene.assoc +++ b/po-associations/po_anatomy_gene_oryza_gramene.assoc @@ -459,81 +459,81 @@ GR_gene GR:0060161 [CMS-UR89] PO:0006203 GR_ref:25480|PMID:14617093 IC Q9FEG8 A GR_gene GR:0060162 [CMS-UR102] PO:0006203 GR_ref:25480|PMID:14617093 IC Q9FXW5 A NA synthase gene 3 OsNAS3 gene taxon:4530 20090923 GR GR_gene GR:0060163 [CMS-UR104] PO:0006203 GR_ref:12308|PMID:16926158 IC Q0PCF5 A Deoxymugineic acid synthase1 OsDMAS1 gene taxon:4530 20090923 GR GR_gene GR:0060164 [CMS-UR106] PO:0006215 GR_ref:8348|PMID:15299121 IMP Q6Z4G0 A MADS box gene 18 OsMADS18|OsMADS2|FDRMADS7|OsMADS28 gene taxon:4530 20090923 GR -GR_gene GR:0060165 [CMS-VN1] PO:0006318 GR_ref:6006 IC Q35294 A CYTOPLASMIC MALE STERILITY BO [cms-bo]|`Chinsurah boro 2' cytoplasm|[cms-bo]|'Chinsurah boro II' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060168 [cms-Miz4] PO:0006318 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21018 [cms-DRW21018]|[cms-DRW21018]|'DRW21018' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060169 [cms-Miz21] PO:0006318 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21030 [cms-DRW21030]|[cms-DRW21030]|'DRW21030' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060174 CPS PO:0006318 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21039 [cms-DRW21039]|[cms-DRW21039]|'DRW21039' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060860 SE1 PO:0006318 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY IR66707A Oryza perennis Acc. 104823 cytoplasm|[cms-IR66707A]|Oryza perennis Acc104823 cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060862 SE3 PO:0006318 GR_ref:5870 TAS A CYTOPLASMIC MALE STERILITY KALINGA [cms-Kalinga-I]|[cms-Kalinga-I]|Cytoplasmic controlled cold tolerance gene taxon:4530 20090923 GR -GR_gene GR:0060863 SE4 PO:0006318 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY KHIABORO [cms-Khiaboro]|`Khiaboro' cytoplasm|[cms-Khiaboro]|'Khiaboro' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060864 SE5 PO:0006318 GR_ref:6419 TAS A CYTOPLASMIC MALE STERILITY ID `Lead rice' cytoplasm|[cms-ld]|[cms-ld]|'Lead rice' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060867 SE8 PO:0006318 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY RPW21111 [cms-DPW21111]|[cms-RPW21111]|'RPW21111' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0061082 fl16 PO:0006318 GR_ref:5713 TAS A CYTOPLASMIC MALE STERILITY TA `TA820' cytoplasm|[cms-TA]|[cms-TA]|'TA820' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060936 SL1 PO:0006318 GR_ref:6358 TAS A CYTOPLASMIC MALE STERILITY UR27 [cms-UR27]|`UR27F' cytoplasm|[cms-UR27]|'UR27F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060940 SUCINF PO:0006318 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR89 `UR89F' cytoplasm|[cms-UR89]|[cms-UR89]|'UR89F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060965 TRI PO:0006318 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR102 `UR102F' cytoplasm|[cms-UR102]|[cms-UR102]|'UR102F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0061051 Z5 PO:0006318 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR104 [cms-UR104]|`UR104F' cytoplasm|[cms-UR104]|'UR104F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0061238 Fl41 PO:0006318 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR106 [cms-UR106]|`UR106F' cytoplasm|[cms-UR106]|'UR106F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060530 MORI1 PO:0006318 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY VN 1 [cms-VN1]|[cms-VN1]|'VN1' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060139 CINF PO:0006318 GR_ref:6086 TAS A 'Miz4' cytoplasm `Miz 4' cytoplasm|[cms-Miz4] gene taxon:4530 20090923 GR -GR_gene GR:0060140 CINM PO:0006318 GR_ref:6087 TAS A 'Miz21' cytoplasm `Miz 21' cytoplasm|[cms-Miz21] gene taxon:4530 20090923 GR -GR_gene GR:0060190 D7 PO:0006318 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR -GR_gene GR:0060275 E1 PO:0006318 GR_ref:2258 IC Q9FE92 A PHOTOSENSITIVITY 1 Fl|Lm|Hd1|Se1|K|Photoperiod-sensitivity-1|Rs|Lf|Fl1|Flowering date-1 gene taxon:4530 20090923 GR -GR_gene GR:0060277 E3 PO:0006318 GR_ref:5858 TAS A PHOTOSENSITIVITY 3 Photoperiod-sensitivity-3|Se3(t)|Fl6|Flowering date-6 gene taxon:4530 20090923 GR -GR_gene GR:0060278 EF1 PO:0006318 GR_ref:3264 TAS A PHOTOSENSITIVITY 4 Photoperiod-sensitivity-4|Se4(t)|Fl7|Flowering date-7 gene taxon:4530 20090923 GR -GR_gene GR:0060147 [CMS-CW] PO:0006318 GR_ref:5164 IC Q69XJ4 A PHOTOSENSITIVITY 5 Photoperiod-sensitivity-5|Se5|Fl8|Flowering date-8 gene taxon:4530 20090923 GR -GR_gene GR:0060282 EFX PO:0006318 GR_ref:6033 TAS A PHOTOSENSITIVITY 8 Heading date-2|Hd2|Photoperiod-sensitivity-8|Se8(t)*|Fl11|Flowering date-11 gene taxon:4530 20090923 GR -GR_gene GR:0060283 EFY PO:0006318 GR_ref:6157 TAS A flowering date-16 photoperiod-sensitivity from Patpaku|sepat(t)* gene taxon:4530 20090923 GR -GR_gene GR:0060284 EF PO:0006318 GR_ref:6472 TAS A STAMENLESS 1 sl1|stl1|stamenless-1 gene taxon:4530 20090923 GR -GR_gene GR:0060442 HD3A PO:0006318 GR_ref:6248 TAS A SUPPRESSOR FOR CROSS-INCOMPATIBILITY CINF Su Cinf|Suppressor for cross-incompatibility (Cinf) gene taxon:4530 20090923 GR -GR_gene GR:0060443 HD5 PO:0006318 GR_ref:1725 TAS A TRIANGULAR HULL tri|triangular hull gene taxon:4530 20090923 GR -GR_gene GR:0060444 HD6 PO:0006318 GR_ref:5883 TAS A ZEBRA 5 z5|zebra-5 gene taxon:4530 20090923 GR -GR_gene GR:0060484 ISE1 PO:0006318 GR_ref:6429 TAS A Flowering date-41 Hd7|Heading date-7 gene taxon:4530 20090923 GR -GR_gene GR:0060500 LH PO:0006318 GR_ref:6552|PMID:11782419 TAS A MORI 1 mori1|juvenile-adult phase change gene taxon:4530 20090923 GR -GR_gene GR:0060585 OPS PO:0006318 GR_ref:6248 TAS A CROSS-INCOMPATIBILITY IN THE FEMALE REACTION Lcr|Cinf|Cross-incompatibility in the female reaction gene taxon:4530 20090923 GR -GR_gene GR:0060143 CLW PO:0006318 GR_ref:2152 TAS A CROSS-INCOMPATIBILITY CARRIED BY T65WX cross-incompatibility carried by T65wx|cinm|cross-incompatibility carried by T65wx gene taxon:4530 20090923 GR -GR_gene GR:0060145 [CMS-ARC] PO:0006318 GR_ref:6242 TAS A DWARF HEIEIDAIKOKU OR CLEISTOGAMOUS dwf7|heieidaikoku or cleistogamous dwarf|d7|dwarf-7 gene taxon:4530 20090923 GR -GR_gene GR:0060151 [CMS-GAM] PO:0006318 GR_ref:5848 TAS A HEADING DATE 1 mEf1|Hd4(t)|Heading date-1|Fl18|Flowering date-18 gene taxon:4530 20090923 GR -GR_gene GR:0060152 [CMS-HL] PO:0006318 GR_ref:5848 TAS A HEADING DATE 3 Heading date-3|Fl20|Flowering date-20 gene taxon:4530 20090923 GR -GR_gene GR:0060158 [CMS-SP] PO:0006318 GR_ref:4598 TAS A EARLINESS 1 Ef2|Earliness-1|Ef1|Fl21|Flowering date-21 gene taxon:4530 20090923 GR -GR_gene GR:0060166 [CMS-WA] PO:0006318 GR_ref:5681 TAS A CYTOPLASMIC MALE STERILITY CW Chinese wild rice cytoplasm|[cms-CW]|[cms-CW]|Chinese wild rice cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060238 DP1 PO:0006318 GR_ref:6363 TAS A EARLINESS X Efx|Earliness-x|Ef5(t)*|Fl27|Flowering date-27 gene taxon:4530 20090923 GR -GR_gene GR:0060240 DP PO:0006318 GR_ref:3883 TAS A EARLINESS Y Ef6(t)*|Earliness-y|Efy|Fl28|Flowering date-28 gene taxon:4530 20090923 GR -GR_gene GR:0060581 OMS PO:0006318 GR_ref:365|PMID:9291958 TAS A EARLINESS INTRODUCED FROM ORYZA AUSTRALIENSIS ef(t)*|earliness introduced from Oryza australiensis or O. glaberrima|fl29|flowering date-29 gene taxon:4530 20090923 GR -GR_gene GR:0060239 DP2 PO:0006318 GR_ref:5126 IC Q93WI9 A HEADING DATE 3A Hd3a|Heading date-3a|Fl32a|Flowering date-32a gene taxon:4530 20090923 GR -GR_gene GR:0060287 EG1 PO:0006318 GR_ref:5126 TAS A Heading date (QTL)-5(t) Heading date-5|Hd5(t)*|Fl33|Flowering date-33 gene taxon:4530 20090923 GR -GR_gene GR:0060288 eg2 PO:0006318 GR_ref:6371 IC Q9AQU1 A Heading date 6 Heading date-6|Hd6(t)*|Fl34|Flowering date-34 gene taxon:4530 20090923 GR -GR_gene GR:0060294 ENSE1 PO:0006318 GR_ref:6312 TAS A recessive inhibitor for photoperiod-sensitivity (Se1) iSe1|fl3|flowering date-3 gene taxon:4530 20090923 GR -GR_gene GR:0060526 MIK PO:0006318 GR_ref:850 TAS A LATE HEADING Late heading|Lh(t)*|Fl36|Flowering date-36 gene taxon:4530 20090923 GR -GR_gene GR:0061066 ES1 PO:0006318 GR_ref:3024 TAS A OPEN HULL STERILE ops|open hull sterile gene taxon:4530 20090923 GR -GR_gene GR:0061000 wgl PO:0006318 GR_ref:3024 TAS A CLAW SHAPED SPIKELET clw|claw shaped spikelet gene taxon:4530 20090923 GR -GR_gene GR:0060058 APO1 PO:0006318 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY ARC [cms-ARC] [mt]|`ARC13829-26' cytoplasm|[cms-ARC]|ARC13829-26 cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060233 DL PO:0006318 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY GAM [cms-GAM]|Gambiaca cytoplasm|[cms-GAM]|Gambiaca cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060052 AN5 PO:0006318 GR_ref:6007 TAS A CYTOPLASMIC MALE STERILITY HL [cms-HL]|HL-group cytoplasm|[cms-HL]|HL-group cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0100117 Rcn1 PO:0006318 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY SP [cms-sp]|`MS577A' cytoplasm|[cms-sp]|MS577A cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0100602 GASR1 PO:0006318 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY WA WA-group cytoplasm|[cms-WA]|[cms-WA]|WA-group cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0100603 GASR2 PO:0006318 GR_ref:5883 TAS A DEPRESSED PALEA 1 pa|dp1|depressed palea-1 gene taxon:4530 20090923 GR -GR_gene GR:0100758 osa-MIR168a PO:0006318 GR_ref:2588 TAS A DEPRESSED PALEA dp(t)*|depressed palea|dp3|depressed palea-3 gene taxon:4530 20090923 GR -GR_gene GR:0100759 osa-MIR168b PO:0006318 GR_ref:5968 TAS A OPEN HULL MALE STERILE oms|open hull male sterile gene taxon:4530 20090923 GR -GR_gene GR:0080005 FOR1 PO:0006318 GR_ref:5789 TAS A DEPRESSED PALEA 2 dp2|depressed palea-2 gene taxon:4530 20090923 GR -GR_gene GR:0080021 MADS22 PO:0006318 GR_ref:5655 TAS A EXTRA GLUME 1 eg1|extra glume-1 gene taxon:4530 20090923 GR -GR_gene GR:0080024 GID2 PO:0006318 GR_ref:6092 TAS A extra glume-2 gene taxon:4530 20090923 GR -GR_gene GR:0080025 MADS18 PO:0006318 GR_ref:3838 TAS A ENHANCER FOR PHOTOSENSITIVITY Enhancer for photoperiod-sensitivity (Se1)|EnSe1(t)|Fl2|Flowering date-2 gene taxon:4530 20090923 GR -GR_gene GR:0060193 D11 PO:0006318 GR_ref:6375 TAS A MICROSATELLITE-TARGETING TRANSPOSABLE ELEMENT 'Kitaake mutant' minute grain|mik|mi2|minute grain-2 gene taxon:4530 20090923 GR -GR_gene GR:0060594 PAP1 PO:0006318 GR_ref:6099 TAS A EXTRUDING STIGMA 1 Es1|Extruding stigma-1 gene taxon:4530 20090923 GR -GR_gene GR:0060756 RI PO:0006318 GR_ref:5673 TAS A spikelet width spikelet width gene taxon:4530 20090923 GR -GR_gene GR:0100117 Rcn1 PO:0006318 GR_ref:6474 TAS A ABERRANT PANICLE ORGANIZATION 1 apo1|aberrant panicle organization-1 gene taxon:4530 20090923 GR -GR_gene GR:0100118 Rcn2 PO:0006318 GR_ref:6295 IC Q76EJ0 A DROOPING LEAF lop|dl|drooping leaf|dl1|drooping leaf-1 gene taxon:4530 20090923 GR -GR_gene GR:0060066 BAMY1 PO:0006318 GR_ref:6099 TAS A AWN 5 an5|awn-5 gene taxon:4530 20090923 GR -GR_gene GR:0060067 Bga2 PO:0006318 GR_ref:9520|PMID:12148532 IEP Q9XGS5 A Putative phosphatidylethanolamine-binding protein Putative TFL1/CEN ortholog|Fdr2 gene taxon:4530 20090923 GR -GR_gene GR:0100117 Rcn1 PO:0006318 GR_ref:11207|PMID:16905871 IC Q94HA1 A GA-stimulated transcript-related gene 1 OsGASR1 gene taxon:4530 20090923 GR -GR_gene GR:0100118 Rcn2 PO:0006318 GR_ref:11207|PMID:16905871 IC Q7X885 A GA-stimulated transcript-related gene 2 OsGASR2 gene taxon:4530 20090923 GR -GR_gene GR:0080062 GIF1 PO:0006318 GR_ref:11274|PMID:15685364 TAS A micro RNA 168a gene taxon:4530 20090923 GR -GR_gene GR:0080036 SNB PO:0006318 GR_ref:11273|PMID:16126864 TAS A micro RNA 168b gene taxon:4530 20090923 GR -GR_gene GR:0080025 MADS18 PO:0006318 GR_ref:8170|PMID:14750524 IMP Q8GT95 A floral organ regulator 1 OsFOR1 gene taxon:4530 20090923 GR -GR_gene GR:0080004 WRKY71 PO:0006318 GR_ref:11425|PMID:15682279 IMP Q9XJ66 A MADS22 OsMADS22|STMADS11-like|RMD1 gene taxon:4530 20090923 GR -GR_gene GR:0080002 FCA PO:0006318 GR_ref:11456|PMID:14756772 IEP Q7XAK4 A GA-insensitive dwarf 2 gid2 gene taxon:4530 20090923 GR -GR_gene GR:0060121 CHL4 PO:0006318 GR_ref:8348|PMID:15299121 IMP Q6Z4G0 A MADS box gene 18 OsMADS18|OsMADS2|FDRMADS7|OsMADS28 gene taxon:4530 20090923 GR +GR_gene GR:0060165 [CMS-VN1] PO:0009082 GR_ref:6006 IC Q35294 A CYTOPLASMIC MALE STERILITY BO [cms-bo]|`Chinsurah boro 2' cytoplasm|[cms-bo]|'Chinsurah boro II' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060168 [cms-Miz4] PO:0009082 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21018 [cms-DRW21018]|[cms-DRW21018]|'DRW21018' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060169 [cms-Miz21] PO:0009082 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21030 [cms-DRW21030]|[cms-DRW21030]|'DRW21030' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060174 CPS PO:0009082 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21039 [cms-DRW21039]|[cms-DRW21039]|'DRW21039' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060860 SE1 PO:0009082 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY IR66707A Oryza perennis Acc. 104823 cytoplasm|[cms-IR66707A]|Oryza perennis Acc104823 cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060862 SE3 PO:0009082 GR_ref:5870 TAS A CYTOPLASMIC MALE STERILITY KALINGA [cms-Kalinga-I]|[cms-Kalinga-I]|Cytoplasmic controlled cold tolerance gene taxon:4530 20090923 GR +GR_gene GR:0060863 SE4 PO:0009082 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY KHIABORO [cms-Khiaboro]|`Khiaboro' cytoplasm|[cms-Khiaboro]|'Khiaboro' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060864 SE5 PO:0009082 GR_ref:6419 TAS A CYTOPLASMIC MALE STERILITY ID `Lead rice' cytoplasm|[cms-ld]|[cms-ld]|'Lead rice' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060867 SE8 PO:0009082 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY RPW21111 [cms-DPW21111]|[cms-RPW21111]|'RPW21111' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0061082 fl16 PO:0009082 GR_ref:5713 TAS A CYTOPLASMIC MALE STERILITY TA `TA820' cytoplasm|[cms-TA]|[cms-TA]|'TA820' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060936 SL1 PO:0009082 GR_ref:6358 TAS A CYTOPLASMIC MALE STERILITY UR27 [cms-UR27]|`UR27F' cytoplasm|[cms-UR27]|'UR27F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060940 SUCINF PO:0009082 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR89 `UR89F' cytoplasm|[cms-UR89]|[cms-UR89]|'UR89F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060965 TRI PO:0009082 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR102 `UR102F' cytoplasm|[cms-UR102]|[cms-UR102]|'UR102F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0061051 Z5 PO:0009082 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR104 [cms-UR104]|`UR104F' cytoplasm|[cms-UR104]|'UR104F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0061238 Fl41 PO:0009082 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR106 [cms-UR106]|`UR106F' cytoplasm|[cms-UR106]|'UR106F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060530 MORI1 PO:0009082 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY VN 1 [cms-VN1]|[cms-VN1]|'VN1' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060139 CINF PO:0009082 GR_ref:6086 TAS A 'Miz4' cytoplasm `Miz 4' cytoplasm|[cms-Miz4] gene taxon:4530 20090923 GR +GR_gene GR:0060140 CINM PO:0009082 GR_ref:6087 TAS A 'Miz21' cytoplasm `Miz 21' cytoplasm|[cms-Miz21] gene taxon:4530 20090923 GR +GR_gene GR:0060190 D7 PO:0009082 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR +GR_gene GR:0060275 E1 PO:0009082 GR_ref:2258 IC Q9FE92 A PHOTOSENSITIVITY 1 Fl|Lm|Hd1|Se1|K|Photoperiod-sensitivity-1|Rs|Lf|Fl1|Flowering date-1 gene taxon:4530 20090923 GR +GR_gene GR:0060277 E3 PO:0009082 GR_ref:5858 TAS A PHOTOSENSITIVITY 3 Photoperiod-sensitivity-3|Se3(t)|Fl6|Flowering date-6 gene taxon:4530 20090923 GR +GR_gene GR:0060278 EF1 PO:0009082 GR_ref:3264 TAS A PHOTOSENSITIVITY 4 Photoperiod-sensitivity-4|Se4(t)|Fl7|Flowering date-7 gene taxon:4530 20090923 GR +GR_gene GR:0060147 [CMS-CW] PO:0009082 GR_ref:5164 IC Q69XJ4 A PHOTOSENSITIVITY 5 Photoperiod-sensitivity-5|Se5|Fl8|Flowering date-8 gene taxon:4530 20090923 GR +GR_gene GR:0060282 EFX PO:0009082 GR_ref:6033 TAS A PHOTOSENSITIVITY 8 Heading date-2|Hd2|Photoperiod-sensitivity-8|Se8(t)*|Fl11|Flowering date-11 gene taxon:4530 20090923 GR +GR_gene GR:0060283 EFY PO:0009082 GR_ref:6157 TAS A flowering date-16 photoperiod-sensitivity from Patpaku|sepat(t)* gene taxon:4530 20090923 GR +GR_gene GR:0060284 EF PO:0009082 GR_ref:6472 TAS A STAMENLESS 1 sl1|stl1|stamenless-1 gene taxon:4530 20090923 GR +GR_gene GR:0060442 HD3A PO:0009082 GR_ref:6248 TAS A SUPPRESSOR FOR CROSS-INCOMPATIBILITY CINF Su Cinf|Suppressor for cross-incompatibility (Cinf) gene taxon:4530 20090923 GR +GR_gene GR:0060443 HD5 PO:0009082 GR_ref:1725 TAS A TRIANGULAR HULL tri|triangular hull gene taxon:4530 20090923 GR +GR_gene GR:0060444 HD6 PO:0009082 GR_ref:5883 TAS A ZEBRA 5 z5|zebra-5 gene taxon:4530 20090923 GR +GR_gene GR:0060484 ISE1 PO:0009082 GR_ref:6429 TAS A Flowering date-41 Hd7|Heading date-7 gene taxon:4530 20090923 GR +GR_gene GR:0060500 LH PO:0009082 GR_ref:6552|PMID:11782419 TAS A MORI 1 mori1|juvenile-adult phase change gene taxon:4530 20090923 GR +GR_gene GR:0060585 OPS PO:0009082 GR_ref:6248 TAS A CROSS-INCOMPATIBILITY IN THE FEMALE REACTION Lcr|Cinf|Cross-incompatibility in the female reaction gene taxon:4530 20090923 GR +GR_gene GR:0060143 CLW PO:0009082 GR_ref:2152 TAS A CROSS-INCOMPATIBILITY CARRIED BY T65WX cross-incompatibility carried by T65wx|cinm|cross-incompatibility carried by T65wx gene taxon:4530 20090923 GR +GR_gene GR:0060145 [CMS-ARC] PO:0009082 GR_ref:6242 TAS A DWARF HEIEIDAIKOKU OR CLEISTOGAMOUS dwf7|heieidaikoku or cleistogamous dwarf|d7|dwarf-7 gene taxon:4530 20090923 GR +GR_gene GR:0060151 [CMS-GAM] PO:0009082 GR_ref:5848 TAS A HEADING DATE 1 mEf1|Hd4(t)|Heading date-1|Fl18|Flowering date-18 gene taxon:4530 20090923 GR +GR_gene GR:0060152 [CMS-HL] PO:0009082 GR_ref:5848 TAS A HEADING DATE 3 Heading date-3|Fl20|Flowering date-20 gene taxon:4530 20090923 GR +GR_gene GR:0060158 [CMS-SP] PO:0009082 GR_ref:4598 TAS A EARLINESS 1 Ef2|Earliness-1|Ef1|Fl21|Flowering date-21 gene taxon:4530 20090923 GR +GR_gene GR:0060166 [CMS-WA] PO:0009082 GR_ref:5681 TAS A CYTOPLASMIC MALE STERILITY CW Chinese wild rice cytoplasm|[cms-CW]|[cms-CW]|Chinese wild rice cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060238 DP1 PO:0009082 GR_ref:6363 TAS A EARLINESS X Efx|Earliness-x|Ef5(t)*|Fl27|Flowering date-27 gene taxon:4530 20090923 GR +GR_gene GR:0060240 DP PO:0009082 GR_ref:3883 TAS A EARLINESS Y Ef6(t)*|Earliness-y|Efy|Fl28|Flowering date-28 gene taxon:4530 20090923 GR +GR_gene GR:0060581 OMS PO:0009082 GR_ref:365|PMID:9291958 TAS A EARLINESS INTRODUCED FROM ORYZA AUSTRALIENSIS ef(t)*|earliness introduced from Oryza australiensis or O. glaberrima|fl29|flowering date-29 gene taxon:4530 20090923 GR +GR_gene GR:0060239 DP2 PO:0009082 GR_ref:5126 IC Q93WI9 A HEADING DATE 3A Hd3a|Heading date-3a|Fl32a|Flowering date-32a gene taxon:4530 20090923 GR +GR_gene GR:0060287 EG1 PO:0009082 GR_ref:5126 TAS A Heading date (QTL)-5(t) Heading date-5|Hd5(t)*|Fl33|Flowering date-33 gene taxon:4530 20090923 GR +GR_gene GR:0060288 eg2 PO:0009082 GR_ref:6371 IC Q9AQU1 A Heading date 6 Heading date-6|Hd6(t)*|Fl34|Flowering date-34 gene taxon:4530 20090923 GR +GR_gene GR:0060294 ENSE1 PO:0009082 GR_ref:6312 TAS A recessive inhibitor for photoperiod-sensitivity (Se1) iSe1|fl3|flowering date-3 gene taxon:4530 20090923 GR +GR_gene GR:0060526 MIK PO:0009082 GR_ref:850 TAS A LATE HEADING Late heading|Lh(t)*|Fl36|Flowering date-36 gene taxon:4530 20090923 GR +GR_gene GR:0061066 ES1 PO:0009082 GR_ref:3024 TAS A OPEN HULL STERILE ops|open hull sterile gene taxon:4530 20090923 GR +GR_gene GR:0061000 wgl PO:0009082 GR_ref:3024 TAS A CLAW SHAPED SPIKELET clw|claw shaped spikelet gene taxon:4530 20090923 GR +GR_gene GR:0060058 APO1 PO:0009082 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY ARC [cms-ARC] [mt]|`ARC13829-26' cytoplasm|[cms-ARC]|ARC13829-26 cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060233 DL PO:0009082 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY GAM [cms-GAM]|Gambiaca cytoplasm|[cms-GAM]|Gambiaca cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060052 AN5 PO:0009082 GR_ref:6007 TAS A CYTOPLASMIC MALE STERILITY HL [cms-HL]|HL-group cytoplasm|[cms-HL]|HL-group cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0100117 Rcn1 PO:0009082 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY SP [cms-sp]|`MS577A' cytoplasm|[cms-sp]|MS577A cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0100602 GASR1 PO:0009082 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY WA WA-group cytoplasm|[cms-WA]|[cms-WA]|WA-group cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0100603 GASR2 PO:0009082 GR_ref:5883 TAS A DEPRESSED PALEA 1 pa|dp1|depressed palea-1 gene taxon:4530 20090923 GR +GR_gene GR:0100758 osa-MIR168a PO:0009082 GR_ref:2588 TAS A DEPRESSED PALEA dp(t)*|depressed palea|dp3|depressed palea-3 gene taxon:4530 20090923 GR +GR_gene GR:0100759 osa-MIR168b PO:0009082 GR_ref:5968 TAS A OPEN HULL MALE STERILE oms|open hull male sterile gene taxon:4530 20090923 GR +GR_gene GR:0080005 FOR1 PO:0009082 GR_ref:5789 TAS A DEPRESSED PALEA 2 dp2|depressed palea-2 gene taxon:4530 20090923 GR +GR_gene GR:0080021 MADS22 PO:0009082 GR_ref:5655 TAS A EXTRA GLUME 1 eg1|extra glume-1 gene taxon:4530 20090923 GR +GR_gene GR:0080024 GID2 PO:0009082 GR_ref:6092 TAS A extra glume-2 gene taxon:4530 20090923 GR +GR_gene GR:0080025 MADS18 PO:0009082 GR_ref:3838 TAS A ENHANCER FOR PHOTOSENSITIVITY Enhancer for photoperiod-sensitivity (Se1)|EnSe1(t)|Fl2|Flowering date-2 gene taxon:4530 20090923 GR +GR_gene GR:0060193 D11 PO:0009082 GR_ref:6375 TAS A MICROSATELLITE-TARGETING TRANSPOSABLE ELEMENT 'Kitaake mutant' minute grain|mik|mi2|minute grain-2 gene taxon:4530 20090923 GR +GR_gene GR:0060594 PAP1 PO:0009082 GR_ref:6099 TAS A EXTRUDING STIGMA 1 Es1|Extruding stigma-1 gene taxon:4530 20090923 GR +GR_gene GR:0060756 RI PO:0009082 GR_ref:5673 TAS A spikelet width spikelet width gene taxon:4530 20090923 GR +GR_gene GR:0100117 Rcn1 PO:0009082 GR_ref:6474 TAS A ABERRANT PANICLE ORGANIZATION 1 apo1|aberrant panicle organization-1 gene taxon:4530 20090923 GR +GR_gene GR:0100118 Rcn2 PO:0009082 GR_ref:6295 IC Q76EJ0 A DROOPING LEAF lop|dl|drooping leaf|dl1|drooping leaf-1 gene taxon:4530 20090923 GR +GR_gene GR:0060066 BAMY1 PO:0009082 GR_ref:6099 TAS A AWN 5 an5|awn-5 gene taxon:4530 20090923 GR +GR_gene GR:0060067 Bga2 PO:0009082 GR_ref:9520|PMID:12148532 IEP Q9XGS5 A Putative phosphatidylethanolamine-binding protein Putative TFL1/CEN ortholog|Fdr2 gene taxon:4530 20090923 GR +GR_gene GR:0100117 Rcn1 PO:0009082 GR_ref:11207|PMID:16905871 IC Q94HA1 A GA-stimulated transcript-related gene 1 OsGASR1 gene taxon:4530 20090923 GR +GR_gene GR:0100118 Rcn2 PO:0009082 GR_ref:11207|PMID:16905871 IC Q7X885 A GA-stimulated transcript-related gene 2 OsGASR2 gene taxon:4530 20090923 GR +GR_gene GR:0080062 GIF1 PO:0009082 GR_ref:11274|PMID:15685364 TAS A micro RNA 168a gene taxon:4530 20090923 GR +GR_gene GR:0080036 SNB PO:0009082 GR_ref:11273|PMID:16126864 TAS A micro RNA 168b gene taxon:4530 20090923 GR +GR_gene GR:0080025 MADS18 PO:0009082 GR_ref:8170|PMID:14750524 IMP Q8GT95 A floral organ regulator 1 OsFOR1 gene taxon:4530 20090923 GR +GR_gene GR:0080004 WRKY71 PO:0009082 GR_ref:11425|PMID:15682279 IMP Q9XJ66 A MADS22 OsMADS22|STMADS11-like|RMD1 gene taxon:4530 20090923 GR +GR_gene GR:0080002 FCA PO:0009082 GR_ref:11456|PMID:14756772 IEP Q7XAK4 A GA-insensitive dwarf 2 gid2 gene taxon:4530 20090923 GR +GR_gene GR:0060121 CHL4 PO:0009082 GR_ref:8348|PMID:15299121 IMP Q6Z4G0 A MADS box gene 18 OsMADS18|OsMADS2|FDRMADS7|OsMADS28 gene taxon:4530 20090923 GR GR_gene GR:0060122 CHL5 PO:0006321 GR_ref:5792 IC Q6F4F5 A DWARF SHINKANEAIKOKU OR NOHRIN 28 shinkaneaikoku or nohrin 28 dwarf|dwf10|d8|D11/CYP724B1|OsDWARF11|d11|dwarf-11 gene taxon:4530 20090923 GR GR_gene GR:0060186 D3 PO:0006321 GR_ref:5956 TAS A PANICLE PHYTOMER 1 pap1|panicle phytomer-1 gene taxon:4530 20090923 GR GR_gene GR:0060187 D4 PO:0006321 GR_ref:1712 TAS A VERTICILLATE RACHIS ri|verticillate rachis gene taxon:4530 20090923 GR @@ -545,7 +545,7 @@ GR_gene GR:0060216 D51 PO:0006322 GR_ref:9520|PMID:12148532 IC Q9XGS5 A Putativ GR_gene GR:0060192 D10 PO:0006322 GR_ref:9520|PMID:12148532 IC Q6ESF8 A Putative phosphatidylethanolamine-binding protein Putative TFL1/CEN ortholog gene taxon:4530 20090923 GR GR_gene GR:0060322 FC1 PO:0006326 GR_ref:25498|PMID:18820698 IC Q0JDC5 A GRAIN INCOMPLETE FILLING 1 OsCIN2 gene taxon:4530 20090923 GR GR_gene GR:0060212 D33 PO:0006327 GR_ref:11503|PMID:17144896 IC Q8H443 A SUPERNUMERARY BRACT gene taxon:4530 20090923 GR -GR_gene GR:0080008 MOC1 PO:0006329 GR_ref:8348|PMID:15299121 IEP Q6Z4G0 A MADS box gene 18 OsMADS18|OsMADS2|FDRMADS7|OsMADS28 gene taxon:4530 20090923 GR +GR_gene GR:0080008 MOC1 PO:0000229 GR_ref:8348|PMID:15299121 IEP Q6Z4G0 A MADS box gene 18 OsMADS18|OsMADS2|FDRMADS7|OsMADS28 gene taxon:4530 20090923 GR GR_gene GR:0080011 nop PO:0006339 GR_ref:11288|PMID:15047897 IEP Q6IEL0 A Transcription factor WRKY71 OsWRKY71 gene taxon:4530 20090923 GR GR_gene GR:0060226 D61 PO:0006340 GR_ref:11175|PMID:16240176 IEP Q6K271 A flowering time control protein OsFCA|OsFCA-1|OsFCA-gamma gene taxon:4530 20090923 GR GR_gene GR:0101254 Mtn PO:0006343 GR_ref:5653 TAS A CHLORINA 4 chl4|chlorina-4 gene taxon:4530 20090923 GR @@ -564,79 +564,79 @@ GR_gene GR:0080011 nop PO:0006343 GR_ref:7848|PMID:12687001 IMP Q84MM9 A Monocu GR_gene GR:0080022 WDA1 PO:0025195 GR_ref:11261|PMID:15952069 IEP Q69V64 A no pollen Osnop gene taxon:4530 20090923 GR GR_gene GR:0080042 MEL1 PO:0006347 GR_ref:10034 IC Q942F3 A DWARF 61 dm-type dwarf|dwarf-61|d61*|dwf42|BRASSINOSTEROID INSENSITIVE 1|d61|dwarf-61 gene taxon:4530 20090923 GR GR_gene GR:0080042 MEL1 PO:0006347 GR_ref:11518|PMID:16021413 IC Q9LHZ0 A methylthioadenosine nucleosidase OsMTN|MTA nucleosidase|MeSAdo nucleosidase|methylthioadenosine methylthioribohydrolase|Methylthioadenosine/S-adenosyl homocysteine nucleosidase|5'-methylthioadenosine nucleosidase gene taxon:4530 20090923 GR -GR_gene GR:0101183 Lti6B PO:0006384 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR -GR_gene GR:0080022 WDA1 PO:0006384 GR_ref:2434 TAS A MULTIPLE PISTIL 2 mp2|multiple pistil-2 gene taxon:4530 20090923 GR -GR_gene GR:0800010 AID1 PO:0006384 GR_ref:1772|PMID:10852934 IC Q3ZES6 A MADS1 OsMADS1|lhs1|nsr|naked seed rice|leafy hull sterile 1 gene taxon:4530 20090923 GR -GR_gene GR:0800010 AID1 PO:0006441 GR_ref:6472 TAS A STAMENLESS 1 sl1|stl1|stamenless-1 gene taxon:4530 20090923 GR -GR_gene GR:0080006 RTS PO:0006441 GR_ref:6295 IC Q76EJ0 A DROOPING LEAF lop|dl|drooping leaf|dl1|drooping leaf-1 gene taxon:4530 20090923 GR -GR_gene GR:0080007 UDT1 PO:0006441 GR_ref:2434 TAS A MULTIPLE PISTIL 2 mp2|multiple pistil-2 gene taxon:4530 20090923 GR -GR_gene GR:0080022 WDA1 PO:0006441 GR_ref:3031 IMP Q5Z9N5 A FLORAL ORGAN NUMBER 1 floral organ number-1 gene taxon:4530 20090923 GR -GR_gene GR:0061178 MSP1 PO:0006441 GR_ref:10120 IEP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR -GR_gene GR:0060146 [CMS-BO] PO:0006441 GR_ref:1772|PMID:10852934 IC Q3ZES6 A MADS1 OsMADS1|lhs1|nsr|naked seed rice|leafy hull sterile 1 gene taxon:4530 20090923 GR -GR_gene GR:0060148 [CMS-DRW21018] PO:0006441 GR_ref:11503|PMID:17144896 IC Q8H443 A SUPERNUMERARY BRACT gene taxon:4530 20090923 GR -GR_gene GR:0060149 [CMS-DRW21030] PO:0006442 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR -GR_gene GR:0060150 [CMS-DRW21039] PO:0006442 GR_ref:11261|PMID:15952069 IMP Q69V64 A no pollen Osnop gene taxon:4530 20090923 GR -GR_gene GR:0060153 [CMS-IR66707A] PO:0006442 GR_ref:11440|PMID:17138699 IMP Q109K1 A Wax-deficient anther1 Wda1|wda1 gene taxon:4530 20090923 GR -GR_gene GR:0060154 [CMS-KALINGA-I] PO:0006442 GR_ref:11642|PMID:17675402 IMP Q851R2 A MEL1 OsMEL1|OsMEAL1|MEAL1 gene taxon:4530 20090923 GR -GR_gene GR:0060155 [CMS-KHIABORO] PO:0006444 GR_ref:11642|PMID:17675402 IMP Q851R2 A MEL1 OsMEL1|OsMEAL1|MEAL1 gene taxon:4530 20090923 GR -GR_gene GR:0060156 [CMS-ID] PO:0006445 GR_ref:11450|PMID:17219102 IEP Q6Q7C9 A Low temperature induced 6B OsLti6BA|Hydrophobic protein LTI6B|Low temperature-induced protein 6B|drought-induced hydrophobic|DRR2|early drought induced protein|R1G1B gene taxon:4530 20090923 GR -GR_gene GR:0060157 [CMS-RPW21111] PO:0006445 GR_ref:11440|PMID:17138699 IMP Q109K1 A Wax-deficient anther1 Wda1|wda1 gene taxon:4530 20090923 GR -GR_gene GR:0060159 [CMS-TA] PO:0006446 GR_ref:8303|PMID:15247409 IMP Q6T804 A Anther Indehiscence1 OsAID1 gene taxon:4530 20090923 GR -GR_gene GR:0060160 [CMS-UR27] PO:0006449 GR_ref:8303|PMID:15247409 IMP Q6T804 A Anther Indehiscence1 OsAID1 gene taxon:4530 20090923 GR -GR_gene GR:0060161 [CMS-UR89] PO:0006450 GR_ref:11264|PMID:16897470 IMP Q40629 A rice tapetum-specific RTS2 gene taxon:4530 20090923 GR -GR_gene GR:0060162 [CMS-UR102] PO:0006450 GR_ref:11269|PMID:16141453 IMP Q58GE3 A undeveloped Tapetum1 Udt1 gene taxon:4530 20090923 GR -GR_gene GR:0060163 [CMS-UR104] PO:0006450 GR_ref:11440|PMID:17138699 IMP Q109K1 A Wax-deficient anther1 Wda1|wda1 gene taxon:4530 20090923 GR -GR_gene GR:0060164 [CMS-UR106] PO:0006451 GR_ref:10120 IMP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR -GR_gene GR:0060165 [CMS-VN1] PO:0006452 GR_ref:6006 IC Q35294 A CYTOPLASMIC MALE STERILITY BO [cms-bo]|`Chinsurah boro 2' cytoplasm|[cms-bo]|'Chinsurah boro II' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060168 [cms-Miz4] PO:0006452 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21018 [cms-DRW21018]|[cms-DRW21018]|'DRW21018' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060169 [cms-Miz21] PO:0006452 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21030 [cms-DRW21030]|[cms-DRW21030]|'DRW21030' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060147 [CMS-CW] PO:0006452 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21039 [cms-DRW21039]|[cms-DRW21039]|'DRW21039' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060145 [CMS-ARC] PO:0006452 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY IR66707A Oryza perennis Acc. 104823 cytoplasm|[cms-IR66707A]|Oryza perennis Acc104823 cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060151 [CMS-GAM] PO:0006452 GR_ref:5870 TAS A CYTOPLASMIC MALE STERILITY KALINGA [cms-Kalinga-I]|[cms-Kalinga-I]|Cytoplasmic controlled cold tolerance gene taxon:4530 20090923 GR -GR_gene GR:0060152 [CMS-HL] PO:0006452 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY KHIABORO [cms-Khiaboro]|`Khiaboro' cytoplasm|[cms-Khiaboro]|'Khiaboro' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060158 [CMS-SP] PO:0006452 GR_ref:6419 TAS A CYTOPLASMIC MALE STERILITY ID `Lead rice' cytoplasm|[cms-ld]|[cms-ld]|'Lead rice' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060166 [CMS-WA] PO:0006452 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY RPW21111 [cms-DPW21111]|[cms-RPW21111]|'RPW21111' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0080026 RAD PO:0006452 GR_ref:5713 TAS A CYTOPLASMIC MALE STERILITY TA `TA820' cytoplasm|[cms-TA]|[cms-TA]|'TA820' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060936 SL1 PO:0006452 GR_ref:6358 TAS A CYTOPLASMIC MALE STERILITY UR27 [cms-UR27]|`UR27F' cytoplasm|[cms-UR27]|'UR27F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060233 DL PO:0006452 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR89 `UR89F' cytoplasm|[cms-UR89]|[cms-UR89]|'UR89F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060532 MP2 PO:0006452 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR102 `UR102F' cytoplasm|[cms-UR102]|[cms-UR102]|'UR102F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060333 FON1 PO:0006452 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR104 [cms-UR104]|`UR104F' cytoplasm|[cms-UR104]|'UR104F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0080036 SNB PO:0006452 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR106 [cms-UR106]|`UR106F' cytoplasm|[cms-UR106]|'UR106F' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0080050 YSL2 PO:0006452 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY VN 1 [cms-VN1]|[cms-VN1]|'VN1' cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060174 CPS PO:0006452 GR_ref:6086 TAS A 'Miz4' cytoplasm `Miz 4' cytoplasm|[cms-Miz4] gene taxon:4530 20090923 GR -GR_gene GR:0060182 D1 PO:0006452 GR_ref:6087 TAS A 'Miz21' cytoplasm `Miz 21' cytoplasm|[cms-Miz21] gene taxon:4530 20090923 GR -GR_gene GR:0060183 D2 PO:0006452 GR_ref:5681 TAS A CYTOPLASMIC MALE STERILITY CW Chinese wild rice cytoplasm|[cms-CW]|[cms-CW]|Chinese wild rice cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060812 S5 PO:0006452 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY ARC [cms-ARC] [mt]|`ARC13829-26' cytoplasm|[cms-ARC]|ARC13829-26 cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0080041 MADS13 PO:0006452 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY GAM [cms-GAM]|Gambiaca cytoplasm|[cms-GAM]|Gambiaca cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0061178 MSP1 PO:0006452 GR_ref:6007 TAS A CYTOPLASMIC MALE STERILITY HL [cms-HL]|HL-group cytoplasm|[cms-HL]|HL-group cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0060812 S5 PO:0006452 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY SP [cms-sp]|`MS577A' cytoplasm|[cms-sp]|MS577A cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0080041 MADS13 PO:0006452 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY WA WA-group cytoplasm|[cms-WA]|[cms-WA]|WA-group cytoplasm gene taxon:4530 20090923 GR -GR_gene GR:0061178 MSP1 PO:0006452 GR_ref:9503|PMID:15792960 IMP Q64MA3 A RAD OsRAD|OsGEN-L|OsGEN-like gene taxon:4530 20090923 GR -GR_gene GR:0060812 S5 PO:0006455 GR_ref:6472 TAS A STAMENLESS 1 sl1|stl1|stamenless-1 gene taxon:4530 20090923 GR -GR_gene GR:0080042 MEL1 PO:0006455 GR_ref:6295 IC Q76EJ0 A DROOPING LEAF lop|dl|drooping leaf|dl1|drooping leaf-1 gene taxon:4530 20090923 GR -GR_gene GR:0060812 S5 PO:0006455 GR_ref:2434 TAS A MULTIPLE PISTIL 2 mp2|multiple pistil-2 gene taxon:4530 20090923 GR -GR_gene GR:0060812 S5 PO:0006455 GR_ref:3031 IMP Q5Z9N5 A FLORAL ORGAN NUMBER 1 floral organ number-1 gene taxon:4530 20090923 GR -GR_gene GR:0080034 CIN1 PO:0006455 GR_ref:11503|PMID:17144896 IC Q8H443 A SUPERNUMERARY BRACT gene taxon:4530 20090923 GR -GR_gene GR:0080041 MADS13 PO:0006456 GR_ref:25478|PMID:15255870 IC Q5TM89 A yellow stripe 1-like OsYSL2|YS1-like metal-nicotianamine transporter gene taxon:4530 20090923 GR -GR_gene GR:0060703 PS1 PO:0006457 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR -GR_gene GR:0060704 PS2 PO:0006457 GR_ref:5546 TAS A DWARF DAIKOKU Dominant lethal from O. longistaminata|Da|Dhl1|Dominant hybrid lethal-1 gene taxon:4530 20090923 GR -GR_gene GR:0061066 ES1 PO:0006457 GR_ref:5546 TAS A DOMINANT LETHAL 2 Dominant lethal from O. sativa|Db|Dhl2|Dominant hybrid lethal-2 gene taxon:4530 20090923 GR -GR_gene GR:0080041 MADS13 PO:0006457 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR -GR_gene GR:0080034 CIN1 PO:0006457 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR -GR_gene GR:0080034 CIN1 PO:0006462 GR_ref:10120 IEP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR -GR_gene GR:0080034 CIN1 PO:0006462 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR -GR_gene GR:0080038 TAC1 PO:0006462 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR -GR_gene GR:0080061 PROG1 PO:0006463 GR_ref:10120 IMP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR -GR_gene GR:0080061 PROG1 PO:0006463 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR -GR_gene GR:0080025 MADS18 PO:0006463 GR_ref:11642|PMID:17675402 IMP Q851R2 A MEL1 OsMEL1|OsMEAL1|MEAL1 gene taxon:4530 20090923 GR -GR_gene GR:0080041 MADS13 PO:0006464 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR -GR_gene GR:0060442 HD3A PO:0006465 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR -GR_gene GR:0100907 P103-B2 PO:0006465 GR_ref:6847|PMID:11978873 IC Q8S922 A Cell wall invertase 1 OsCIN1 gene taxon:4530 20090923 GR -GR_gene GR:0100929 P107-E1 PO:0006465 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR -GR_gene GR:0100957 P16-C3 PO:0006497 GR_ref:5949 TAS A PURPLE STIGMA 1 Ps1|Purple stigma-1(Gaisenmochi) gene taxon:4530 20090923 GR -GR_gene GR:0100976 P35-D10 PO:0006497 GR_ref:6193 TAS A PURPLE STIGMA 2 Ps1|Ps2|Purple stigma-2 gene taxon:4530 20090923 GR -GR_gene GR:0100979 P40-H12 PO:0006497 GR_ref:6099 TAS A EXTRUDING STIGMA 1 Es1|Extruding stigma-1 gene taxon:4530 20090923 GR -GR_gene GR:0100982 P4-D6 PO:0006508 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR +GR_gene GR:0101183 Lti6B PO:0009062 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR +GR_gene GR:0080022 WDA1 PO:0009062 GR_ref:2434 TAS A MULTIPLE PISTIL 2 mp2|multiple pistil-2 gene taxon:4530 20090923 GR +GR_gene GR:0800010 AID1 PO:0009062 GR_ref:1772|PMID:10852934 IC Q3ZES6 A MADS1 OsMADS1|lhs1|nsr|naked seed rice|leafy hull sterile 1 gene taxon:4530 20090923 GR +GR_gene GR:0800010 AID1 PO:0009029 GR_ref:6472 TAS A STAMENLESS 1 sl1|stl1|stamenless-1 gene taxon:4530 20090923 GR +GR_gene GR:0080006 RTS PO:0009029 GR_ref:6295 IC Q76EJ0 A DROOPING LEAF lop|dl|drooping leaf|dl1|drooping leaf-1 gene taxon:4530 20090923 GR +GR_gene GR:0080007 UDT1 PO:0009029 GR_ref:2434 TAS A MULTIPLE PISTIL 2 mp2|multiple pistil-2 gene taxon:4530 20090923 GR +GR_gene GR:0080022 WDA1 PO:0009029 GR_ref:3031 IMP Q5Z9N5 A FLORAL ORGAN NUMBER 1 floral organ number-1 gene taxon:4530 20090923 GR +GR_gene GR:0061178 MSP1 PO:0009029 GR_ref:10120 IEP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR +GR_gene GR:0060146 [CMS-BO] PO:0009029 GR_ref:1772|PMID:10852934 IC Q3ZES6 A MADS1 OsMADS1|lhs1|nsr|naked seed rice|leafy hull sterile 1 gene taxon:4530 20090923 GR +GR_gene GR:0060148 [CMS-DRW21018] PO:0009029 GR_ref:11503|PMID:17144896 IC Q8H443 A SUPERNUMERARY BRACT gene taxon:4530 20090923 GR +GR_gene GR:0060149 [CMS-DRW21030] PO:0009066 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR +GR_gene GR:0060150 [CMS-DRW21039] PO:0009066 GR_ref:11261|PMID:15952069 IMP Q69V64 A no pollen Osnop gene taxon:4530 20090923 GR +GR_gene GR:0060153 [CMS-IR66707A] PO:0009066 GR_ref:11440|PMID:17138699 IMP Q109K1 A Wax-deficient anther1 Wda1|wda1 gene taxon:4530 20090923 GR +GR_gene GR:0060154 [CMS-KALINGA-I] PO:0009066 GR_ref:11642|PMID:17675402 IMP Q851R2 A MEL1 OsMEL1|OsMEAL1|MEAL1 gene taxon:4530 20090923 GR +GR_gene GR:0060155 [CMS-KHIABORO] PO:0025202 GR_ref:11642|PMID:17675402 IMP Q851R2 A MEL1 OsMEL1|OsMEAL1|MEAL1 gene taxon:4530 20090923 GR +GR_gene GR:0060156 [CMS-ID] PO:0000002 GR_ref:11450|PMID:17219102 IEP Q6Q7C9 A Low temperature induced 6B OsLti6BA|Hydrophobic protein LTI6B|Low temperature-induced protein 6B|drought-induced hydrophobic|DRR2|early drought induced protein|R1G1B gene taxon:4530 20090923 GR +GR_gene GR:0060157 [CMS-RPW21111] PO:0000002 GR_ref:11440|PMID:17138699 IMP Q109K1 A Wax-deficient anther1 Wda1|wda1 gene taxon:4530 20090923 GR +GR_gene GR:0060159 [CMS-TA] PO:0020002 GR_ref:8303|PMID:15247409 IMP Q6T804 A Anther Indehiscence1 OsAID1 gene taxon:4530 20090923 GR +GR_gene GR:0060160 [CMS-UR27] PO:0020101 GR_ref:8303|PMID:15247409 IMP Q6T804 A Anther Indehiscence1 OsAID1 gene taxon:4530 20090923 GR +GR_gene GR:0060161 [CMS-UR89] PO:0009071 GR_ref:11264|PMID:16897470 IMP Q40629 A rice tapetum-specific RTS2 gene taxon:4530 20090923 GR +GR_gene GR:0060162 [CMS-UR102] PO:0009071 GR_ref:11269|PMID:16141453 IMP Q58GE3 A undeveloped Tapetum1 Udt1 gene taxon:4530 20090923 GR +GR_gene GR:0060163 [CMS-UR104] PO:0009071 GR_ref:11440|PMID:17138699 IMP Q109K1 A Wax-deficient anther1 Wda1|wda1 gene taxon:4530 20090923 GR +GR_gene GR:0060164 [CMS-UR106] PO:0020047 GR_ref:10120 IMP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR +GR_gene GR:0060165 [CMS-VN1] PO:0020048 GR_ref:6006 IC Q35294 A CYTOPLASMIC MALE STERILITY BO [cms-bo]|`Chinsurah boro 2' cytoplasm|[cms-bo]|'Chinsurah boro II' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060168 [cms-Miz4] PO:0020048 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21018 [cms-DRW21018]|[cms-DRW21018]|'DRW21018' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060169 [cms-Miz21] PO:0020048 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21030 [cms-DRW21030]|[cms-DRW21030]|'DRW21030' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060147 [CMS-CW] PO:0020048 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY DRW21039 [cms-DRW21039]|[cms-DRW21039]|'DRW21039' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060145 [CMS-ARC] PO:0020048 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY IR66707A Oryza perennis Acc. 104823 cytoplasm|[cms-IR66707A]|Oryza perennis Acc104823 cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060151 [CMS-GAM] PO:0020048 GR_ref:5870 TAS A CYTOPLASMIC MALE STERILITY KALINGA [cms-Kalinga-I]|[cms-Kalinga-I]|Cytoplasmic controlled cold tolerance gene taxon:4530 20090923 GR +GR_gene GR:0060152 [CMS-HL] PO:0020048 GR_ref:5552 TAS A CYTOPLASMIC MALE STERILITY KHIABORO [cms-Khiaboro]|`Khiaboro' cytoplasm|[cms-Khiaboro]|'Khiaboro' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060158 [CMS-SP] PO:0020048 GR_ref:6419 TAS A CYTOPLASMIC MALE STERILITY ID `Lead rice' cytoplasm|[cms-ld]|[cms-ld]|'Lead rice' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060166 [CMS-WA] PO:0020048 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY RPW21111 [cms-DPW21111]|[cms-RPW21111]|'RPW21111' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0080026 RAD PO:0020048 GR_ref:5713 TAS A CYTOPLASMIC MALE STERILITY TA `TA820' cytoplasm|[cms-TA]|[cms-TA]|'TA820' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060936 SL1 PO:0020048 GR_ref:6358 TAS A CYTOPLASMIC MALE STERILITY UR27 [cms-UR27]|`UR27F' cytoplasm|[cms-UR27]|'UR27F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060233 DL PO:0020048 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR89 `UR89F' cytoplasm|[cms-UR89]|[cms-UR89]|'UR89F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060532 MP2 PO:0020048 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR102 `UR102F' cytoplasm|[cms-UR102]|[cms-UR102]|'UR102F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060333 FON1 PO:0020048 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR104 [cms-UR104]|`UR104F' cytoplasm|[cms-UR104]|'UR104F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0080036 SNB PO:0020048 GR_ref:5671 TAS A CYTOPLASMIC MALE STERILITY UR106 [cms-UR106]|`UR106F' cytoplasm|[cms-UR106]|'UR106F' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0080050 YSL2 PO:0020048 GR_ref:5604 TAS A CYTOPLASMIC MALE STERILITY VN 1 [cms-VN1]|[cms-VN1]|'VN1' cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060174 CPS PO:0020048 GR_ref:6086 TAS A 'Miz4' cytoplasm `Miz 4' cytoplasm|[cms-Miz4] gene taxon:4530 20090923 GR +GR_gene GR:0060182 D1 PO:0020048 GR_ref:6087 TAS A 'Miz21' cytoplasm `Miz 21' cytoplasm|[cms-Miz21] gene taxon:4530 20090923 GR +GR_gene GR:0060183 D2 PO:0020048 GR_ref:5681 TAS A CYTOPLASMIC MALE STERILITY CW Chinese wild rice cytoplasm|[cms-CW]|[cms-CW]|Chinese wild rice cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060812 S5 PO:0020048 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY ARC [cms-ARC] [mt]|`ARC13829-26' cytoplasm|[cms-ARC]|ARC13829-26 cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0080041 MADS13 PO:0020048 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY GAM [cms-GAM]|Gambiaca cytoplasm|[cms-GAM]|Gambiaca cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0061178 MSP1 PO:0020048 GR_ref:6007 TAS A CYTOPLASMIC MALE STERILITY HL [cms-HL]|HL-group cytoplasm|[cms-HL]|HL-group cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0060812 S5 PO:0020048 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY SP [cms-sp]|`MS577A' cytoplasm|[cms-sp]|MS577A cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0080041 MADS13 PO:0020048 GR_ref:6006 TAS A CYTOPLASMIC MALE STERILITY WA WA-group cytoplasm|[cms-WA]|[cms-WA]|WA-group cytoplasm gene taxon:4530 20090923 GR +GR_gene GR:0061178 MSP1 PO:0020048 GR_ref:9503|PMID:15792960 IMP Q64MA3 A RAD OsRAD|OsGEN-L|OsGEN-like gene taxon:4530 20090923 GR +GR_gene GR:0060812 S5 PO:0009030 GR_ref:6472 TAS A STAMENLESS 1 sl1|stl1|stamenless-1 gene taxon:4530 20090923 GR +GR_gene GR:0080042 MEL1 PO:0009030 GR_ref:6295 IC Q76EJ0 A DROOPING LEAF lop|dl|drooping leaf|dl1|drooping leaf-1 gene taxon:4530 20090923 GR +GR_gene GR:0060812 S5 PO:0009030 GR_ref:2434 TAS A MULTIPLE PISTIL 2 mp2|multiple pistil-2 gene taxon:4530 20090923 GR +GR_gene GR:0060812 S5 PO:0009030 GR_ref:3031 IMP Q5Z9N5 A FLORAL ORGAN NUMBER 1 floral organ number-1 gene taxon:4530 20090923 GR +GR_gene GR:0080034 CIN1 PO:0009030 GR_ref:11503|PMID:17144896 IC Q8H443 A SUPERNUMERARY BRACT gene taxon:4530 20090923 GR +GR_gene GR:0080041 MADS13 PO:0009072 GR_ref:25478|PMID:15255870 IC Q5TM89 A yellow stripe 1-like OsYSL2|YS1-like metal-nicotianamine transporter gene taxon:4530 20090923 GR +GR_gene GR:0060703 PS1 PO:0020003 GR_ref:3024 TAS A COMPACT PANICLE STERILE cps|compact panicle sterile gene taxon:4530 20090923 GR +GR_gene GR:0060704 PS2 PO:0020003 GR_ref:5546 TAS A DWARF DAIKOKU Dominant lethal from O. longistaminata|Da|Dhl1|Dominant hybrid lethal-1 gene taxon:4530 20090923 GR +GR_gene GR:0061066 ES1 PO:0020003 GR_ref:5546 TAS A DOMINANT LETHAL 2 Dominant lethal from O. sativa|Db|Dhl2|Dominant hybrid lethal-2 gene taxon:4530 20090923 GR +GR_gene GR:0080041 MADS13 PO:0020003 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR +GR_gene GR:0080034 CIN1 PO:0020003 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR +GR_gene GR:0080034 CIN1 PO:0020020 GR_ref:10120 IEP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR +GR_gene GR:0080034 CIN1 PO:0020020 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR +GR_gene GR:0080038 TAC1 PO:0020020 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR +GR_gene GR:0080061 PROG1 PO:0000431 GR_ref:10120 IMP Q8RZV7 A MULTIPLE SPOROCYTE 1 multiple sporocyte|Putative leucin-rich repeat protein kinase|Putative extra sporogenous cells|Msp1|multiple sporogeneous cells-1 gene taxon:4530 20090923 GR +GR_gene GR:0080061 PROG1 PO:0000431 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR +GR_gene GR:0080025 MADS18 PO:0000431 GR_ref:11642|PMID:17675402 IMP Q851R2 A MEL1 OsMEL1|OsMEAL1|MEAL1 gene taxon:4530 20090923 GR +GR_gene GR:0080041 MADS13 PO:0020019 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR +GR_gene GR:0060442 HD3A PO:0020021 GR_ref:456|PMID:7896104 IC Q69YD9 A HYBRID STERILITY 5 S5-i|S5-j|S5-n|Hybrid sterility-26|Hst26|Hybrid sterility-5 gene taxon:4530 20090923 GR +GR_gene GR:0100907 P103-B2 PO:0020021 GR_ref:6847|PMID:11978873 IC Q8S922 A Cell wall invertase 1 OsCIN1 gene taxon:4530 20090923 GR +GR_gene GR:0100929 P107-E1 PO:0020021 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR +GR_gene GR:0100957 P16-C3 PO:0006061 GR_ref:5949 TAS A PURPLE STIGMA 1 Ps1|Purple stigma-1(Gaisenmochi) gene taxon:4530 20090923 GR +GR_gene GR:0100976 P35-D10 PO:0006061 GR_ref:6193 TAS A PURPLE STIGMA 2 Ps1|Ps2|Purple stigma-2 gene taxon:4530 20090923 GR +GR_gene GR:0100979 P40-H12 PO:0006061 GR_ref:6099 TAS A EXTRUDING STIGMA 1 Es1|Extruding stigma-1 gene taxon:4530 20090923 GR +GR_gene GR:0100982 P4-D6 PO:0006043 GR_ref:2512|PMID:10528264 IEP Q2QW53 A MADS13 OcMADS13 gene taxon:4530 20090923 GR GR_gene GR:0100989 P56-H4 PO:0008005 GR_ref:6847|PMID:11978873 IC Q8S922 A Cell wall invertase 1 OsCIN1 gene taxon:4530 20090923 GR GR_gene GR:0101075 P86-H10 PO:0008006 GR_ref:6847|PMID:11978873 IC Q8S922 A Cell wall invertase 1 OsCIN1 gene taxon:4530 20090923 GR GR_gene GR:0101082 P88-A11 PO:0008007 GR_ref:6847|PMID:11978873 IC Q8S922 A Cell wall invertase 1 OsCIN1 gene taxon:4530 20090923 GR diff --git a/po-associations/po_anatomy_qtl_oryza_gramene.assoc b/po-associations/po_anatomy_qtl_oryza_gramene.assoc index 9dc38e0..1cffdc6 100644 --- a/po-associations/po_anatomy_qtl_oryza_gramene.assoc +++ b/po-associations/po_anatomy_qtl_oryza_gramene.assoc @@ -1020,8 +1020,8 @@ GR_QTL CQO3 COLDTL PO:0009011 GR_ref:11453 IC A cold tolerance ctb-2 QTL taxon GR_QTL CQO3 COLDTL PO:0009049 GR_ref:7827 IMP A cold tolerance ctb-2 QTL taxon:4530 20090923 GR GR_QTL CQO3 COLDTL PO:0009049 GR_ref:7762 IMP A cold tolerance ctb-2 QTL taxon:4530 20090923 GR GR_QTL CQO3 COLDTL PO:0000003 GR_ref:11453 IC A cold tolerance ctb-2 QTL taxon:4530 20090923 GR -GR_QTL CQO3 COLDTL PO:0006442 GR_ref:7827 IMP A cold tolerance ctb-2 QTL taxon:4530 20090923 GR -GR_QTL CQO3 COLDTL PO:0006442 GR_ref:7762 IMP A cold tolerance ctb-2 QTL taxon:4530 20090923 GR +GR_QTL CQO3 COLDTL PO:0009066 GR_ref:7827 IMP A cold tolerance ctb-2 QTL taxon:4530 20090923 GR +GR_QTL CQO3 COLDTL PO:0009066 GR_ref:7762 IMP A cold tolerance ctb-2 QTL taxon:4530 20090923 GR GR_QTL AQDU008 COLDTL PO:0000003 GR_ref:11453 IC A cold tolerance qCTS4-1 QTL taxon:4530 20090923 GR GR_QTL AQDU008 COLDTL PO:0009011 GR_ref:11453 IC A cold tolerance qCTS4-1 QTL taxon:4530 20090923 GR GR_QTL AQDU002 COLDTL PO:0000003 GR_ref:11453 IC A cold tolerance qCTS6-2 QTL taxon:4530 20090923 GR @@ -1056,8 +1056,8 @@ GR_QTL CQO1 COLDTL PO:0009011 GR_ref:11453 IC A cold tolerance ctb-1 QTL taxon GR_QTL CQO1 COLDTL PO:0009049 GR_ref:7827 IMP A cold tolerance ctb-1 QTL taxon:4530 20090923 GR GR_QTL CQO1 COLDTL PO:0009049 GR_ref:7762 IMP A cold tolerance ctb-1 QTL taxon:4530 20090923 GR GR_QTL CQO1 COLDTL PO:0000003 GR_ref:11453 IC A cold tolerance ctb-1 QTL taxon:4530 20090923 GR -GR_QTL CQO1 COLDTL PO:0006442 GR_ref:7827 IMP A cold tolerance ctb-1 QTL taxon:4530 20090923 GR -GR_QTL CQO1 COLDTL PO:0006442 GR_ref:7762 IMP A cold tolerance ctb-1 QTL taxon:4530 20090923 GR +GR_QTL CQO1 COLDTL PO:0009066 GR_ref:7827 IMP A cold tolerance ctb-1 QTL taxon:4530 20090923 GR +GR_QTL CQO1 COLDTL PO:0009066 GR_ref:7762 IMP A cold tolerance ctb-1 QTL taxon:4530 20090923 GR GR_QTL CQAA10 COLDTL PO:0000003 GR_ref:11453 IC A cold tolerance qCTS8-1 QTL taxon:4530 20090923 GR GR_QTL CQAA10 COLDTL PO:0009011 GR_ref:11453 IC A cold tolerance qCTS8-1 QTL taxon:4530 20090923 GR GR_QTL CQAA10 COLDTL PO:0009010 GR_ref:11453 IC A cold tolerance qCTS8-1 QTL taxon:4530 20090923 GR diff --git a/po-associations/test_cotton/po_anatomy_protein_Gossypium_AgBase.assoc b/po-associations/test_cotton/po_anatomy_protein_Gossypium_AgBase.assoc index b65c2d0..457a641 100644 --- a/po-associations/test_cotton/po_anatomy_protein_Gossypium_AgBase.assoc +++ b/po-associations/test_cotton/po_anatomy_protein_Gossypium_AgBase.assoc @@ -16,9 +16,9 @@ AgBase Q6JX04 CTL1 PO:0004511 PMID:15284492 IEP A Chitinase-like protein GhCTL AgBase Q6JX03 CTL2 PO:0004511 PMID:15284492 IEP A Chitinase-like protein GhCTL2 protein taxon:3635 20101203 AgBase AgBase A9QED9 PEPC2 PO:0004511 PMID:19815688 IDA A Phosphoenolpyruvate carboxylase GhPEPC2 protein taxon:3635 20101206 AgBase AgBase A7TUG4 FSltp4 PO:0004511 PMID:17715150 IEP A Lipid transfer protein Lipid transfer protein 4 protein taxon:3635 20110307 AgBase -AgBase A1XJ49 ADF6 PO:0009032 PMID:19861654 IEP A Actin depolymerizing factor 6 GhADF6 protein taxon:3635 20110819 AgBase +AgBase A1XJ49 ADF6 PO:0009032 PMID:19861654 IEP A Actin depolymerizing factor 6 GhADF6 protein taxon:3635 20110819 AgBase AgBase A1XJ44 ADF7 PO:0009066 PMID:19861654 IEP A Actin depolymerizing factor 7 GhADF7 protein taxon:3635 20110819 AgBase -AgBase Q4JHK7 ADF8 PO:0009032 PMID:19861654 IEP A Actin depolymerizing factor 6 GhADF8|ADF1 protein taxon:3635 20110819 AgBase +AgBase Q4JHK7 ADF8 PO:0009032 PMID:19861654 IEP A Actin depolymerizing factor 6 GhADF8|ADF1 protein taxon:3635 20110819 AgBase AgBase Q2I823 ACS2 PO:0009066 PMID:18826432 IEP A ACS-like protein GhACS2 protein taxon:3635 20110926 AgBase AgBase Q2I824 ACS1 PO:0009066 PMID:18826432 IEP A ACS-like protein GhACS1 protein taxon:3635 20110926 AgBase AgBase Q9M6B6 FSltp3 PO:0004511 PMID:10634943 IEP A Non-specific lipid-transfer protein protein taxon:3635 20110928 AgBase