From: elserj <elserj@localhost>
Date: Wed, 19 Feb 2020 21:02:53 +0000 (+0000)
Subject: Missed bracket
X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=e279ddfaf7c082948c234736d4b3736aacfd5ec3;p=old-jaiswallab-svn%2F.git

Missed bracket

svn path=/; revision=669
---

diff --git a/interactome_scripts/association_file_from_orthologs_simple.pl b/interactome_scripts/association_file_from_orthologs_simple.pl
index 16e7dca..280cbbd 100755
--- a/interactome_scripts/association_file_from_orthologs_simple.pl
+++ b/interactome_scripts/association_file_from_orthologs_simple.pl
@@ -18,7 +18,7 @@ print "$curr_date\n";
 if ($#ARGV !=2) {
 	print "usage: association_file_from_orthologs.pl in_assoc_file ortho_file out_file\n";
 	exit;
-
+}
 	
 # Grab the find_species subroutines to get the species and taxon id
 if(-e "$ENV{HOME}/scripts/jaiswallab/interactome_scripts/find_species.pl") {
@@ -66,7 +66,7 @@ while(<INGAFFILE>) {
 		#check if symbol found in %gene_hash
 		if(defined($ortho_hash{$db_obj_name})) {
 				my $ortho_gene = $ortho_hash{$db_obj_name};
-				print OUTFILE "MaizeGDB\t$ortho_gene\t$ortho_gene\t$qual\t$ont_id\tPMID:24919147|PMID:21186353\tISO\tAGI_LocusCode:$db_obj_name\t$aspect\t$ortho_gene\t\t$db_obj_type\ttaxon:$new_taxon\t$curr_date\tPlanteome:Justin_Elser\t$annot_ext\t$gp_form_id\n";
+				print OUTFILE "EnsemblPlants\t$ortho_gene\t$ortho_gene\t$qual\t$ont_id\tPMID:24919147|PMID:21186353\tISO\tAGI_LocusCode:$db_obj_name\t$aspect\t$ortho_gene\t\t$db_obj_type\ttaxon:$new_taxon\t$curr_date\tPlanteome:Justin_Elser\t$annot_ext\t$gp_form_id\n";
 		}
 		
 }