From: elserj <elserj@localhost>
Date: Thu, 16 Sep 2010 23:37:28 +0000 (+0000)
Subject: took out print line in cucumber
X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=e9194a5c674720311bbaa4599281f193f77812d8;p=old-jaiswallab-svn%2F.git

took out print line in cucumber

svn path=/; revision=36
---

diff --git a/interactome_scripts/find_species.pl b/interactome_scripts/find_species.pl
index 9deb175..3c4c8f3 100755
--- a/interactome_scripts/find_species.pl
+++ b/interactome_scripts/find_species.pl
@@ -119,9 +119,8 @@ sub find_gene {
 		my ($name,$locus_id,$chrom,$transcript) = split(/\|/,$gene_header);
 		$gene = $transcript; #???
 	}elsif ($species eq "Cucumis_sativus") {
-		my ($name,$gene_id,$scaffold,$unknown) = split(/\|/,$gene_header);
-		print "$name\t$gene_id\t$scaffold\t$unknown\n";
-		$gene = $gene_id;
+		my ($name,$main_isomer,$scaffold,$isomer) = split(/\|/,$gene_header);
+		$gene = $isomer;
 	}elsif ($species eq "Danio_rerio") {
 		my ($gene_id,$transcript) = split(/\|/,$gene_header);
 		$gene = $gene_id;