From: cooperl Date: Thu, 8 Jun 2023 19:25:25 +0000 (+0000) Subject: Changed mapping to leaflet Chl content to new TO term TO:0001140 X-Git-Url: http://gitweb.planteome.org/?a=commitdiff_plain;h=f8e2d1d30e89c44780924469997ada23eed8e412;p=associations%2F.git Changed mapping to leaflet Chl content to new TO term TO:0001140 Fixed a few minor edits in Zea mays qtl file svn path=/; revision=1029 --- diff --git a/to-associations/to_qtl_Zea_mays_Gramene.assoc b/to-associations/to_qtl_Zea_mays_Gramene.assoc index da352de..564e102 100644 --- a/to-associations/to_qtl_Zea_mays_Gramene.assoc +++ b/to-associations/to_qtl_Zea_mays_Gramene.assoc @@ -1067,7 +1067,7 @@ GR_QTL AQHM003 AQHM003 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus GR_QTL AQHM015 AQHM015 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM004 AQHM004 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHN007 AQHN007 TO:0000102 GR_REF:11518|PMID:16021413 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO001 AQHO001 TO:0000102 GR_REF:11517 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO001 AQHO001 TO:0000102 DOI:10.1007/s11104-004-1697-y IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM013 AQHM013 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM019 AQHM019 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM026 AQHM026 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl @@ -1079,7 +1079,7 @@ GR_QTL AQHM011 AQHM011 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus GR_QTL AQHM029 AQHM029 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM020 AQHM020 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM025 AQHM025 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO005 AQHO005 TO:0000102 GR_REF:11517 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO005 AQHO005 TO:0000102 DOI:10.1007/s11104-004-1697-y IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM024 AQHM024 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM017 AQHM017 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHM014 AQHM014 TO:0000102 GR_REF:11479|PMID:16783587 IAGP T phosphorus sensitivity PHOSN QTL taxon:4577 20230523 Gramene|TO:Cooperl @@ -1371,9 +1371,9 @@ GR_QTL DQJ50 DQJ50 TO:0000136 GR_REF:7873 IAGP T relative water content RELWCN GR_QTL DQJ24 DQJ24 TO:0000136 GR_REF:7873 IAGP T relative water content RELWCN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL DQJ8 DQJ8 TO:0000136 GR_REF:7873 IAGP T relative water content RELWCN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL DQJ51 DQJ51 TO:0000136 GR_REF:7873 IAGP T relative water content RELWCN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO004 AQHO004 TO:0002665 GR_REF:11517 IAGP T root hair length RTHLG QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO002 AQHO002 TO:0002665 GR_REF:11517 IAGP T root hair length RTHLG QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO003 AQHO003 TO:0002665 GR_REF:11517 IAGP T root hair length RTHLG QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO004 AQHO004 TO:0002665 DOI:10.1007/s11104-004-1697-y IAGP T root hair length RTHLG QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO002 AQHO002 TO:0002665 DOI:10.1007/s11104-004-1697-y IAGP T root hair length RTHLG QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO003 AQHO003 TO:0002665 DOI:10.1007/s11104-004-1697-y IAGP T root hair length RTHLG QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHN009 AQHN009 TO:0000227 GR_REF:11518|PMID:16021413 IAGP T root length RTLG QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHN012 AQHN012 TO:0000227 GR_REF:11518|PMID:16021413 IAGP T root length RTLG QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQHN008 AQHN008 TO:0000227 GR_REF:11518|PMID:16021413 IAGP T root length RTLG QTL taxon:4577 20230523 Gramene|TO:Cooperl @@ -1440,12 +1440,12 @@ GR_QTL AQFS960 AQFS960 TO:0002759 GR_REF:9455 IAGP T grain number qknp10p6|SDN GR_QTL AQFS961 AQFS961 TO:0002759 GR_REF:9455 IAGP T grain number qknp10p7|SDNB QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQFS962 AQFS962 TO:0002759 GR_REF:9455 IAGP T grain number qknp10p8|SDNB QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQFS964 AQFS964 TO:0002759 GR_REF:9455 IAGP T grain number qknp10p9|SDNB QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO009 AQHO009 TO:0003082 GR_REF:11517 IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO007 AQHO007 TO:0003082 GR_REF:11517 IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO006 AQHO006 TO:0003082 GR_REF:11517 IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO011 AQHO011 TO:0003082 GR_REF:11517 IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO008 AQHO008 TO:0003082 GR_REF:11517 IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl -GR_QTL AQHO010 AQHO010 TO:0003082 GR_REF:11517 IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO009 AQHO009 TO:0003082 DOI:10.1007/s11104-004-1697-y IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO007 AQHO007 TO:0003082 DOI:10.1007/s11104-004-1697-y IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO006 AQHO006 TO:0003082 DOI:10.1007/s11104-004-1697-y IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO011 AQHO011 TO:0003082 DOI:10.1007/s11104-004-1697-y IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO008 AQHO008 TO:0003082 DOI:10.1007/s11104-004-1697-y IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl +GR_QTL AQHO010 AQHO010 TO:0003082 DOI:10.1007/s11104-004-1697-y IAGP T grain phosphorus content SDPHOCN QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQFS419 AQFS419 TO:0000399 GR_REF:9418 IAGP T grain thickness qkthic1|SDTH QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQFS420 AQFS420 TO:0000399 GR_REF:9418 IAGP T grain thickness qkthic2|SDTH QTL taxon:4577 20230523 Gramene|TO:Cooperl GR_QTL AQFS421 AQFS421 TO:0000399 GR_REF:9418 IAGP T grain thickness qkthic3|SDTH QTL taxon:4577 20230523 Gramene|TO:Cooperl diff --git a/to-associations/to_qtl_glycine_SoyBase.assoc b/to-associations/to_qtl_glycine_SoyBase.assoc index 1efb9d0..81f9c14 100644 --- a/to-associations/to_qtl_glycine_SoyBase.assoc +++ b/to-associations/to_qtl_glycine_SoyBase.assoc @@ -529,24 +529,24 @@ SOY_QTL Leaflet_ash_1-6 Leaflet ash 1-6 TO:0000607 SOY_ref:SoyBase6597900 IDA SOY_QTL Leaflet_ash_1-7 Leaflet ash 1-7 TO:0000607 SOY_ref:SoyBase6597900 IDA T Leaflet ash content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper SOY_QTL Leaflet_ash_1-8 Leaflet ash 1-8 TO:0000607 SOY_ref:SoyBase6597900 IDA T Leaflet ash content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper SOY_QTL Leaflet_ash_1-9 Leaflet ash 1-9 TO:0000607 SOY_ref:SoyBase6597900 IDA T Leaflet ash content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-1 Leaflet chlorophyll 1-1 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-10 Leaflet chlorophyll 1-10 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-11 Leaflet chlorophyll 1-11 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-12 Leaflet chlorophyll 1-12 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-13 Leaflet chlorophyll 1-13 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-14 Leaflet chlorophyll 1-14 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-15 Leaflet chlorophyll 1-15 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-16 Leaflet chlorophyll 1-16 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-2 Leaflet chlorophyll 1-2 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-3 Leaflet chlorophyll 1-3 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-4 Leaflet chlorophyll 1-4 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-5 Leaflet chlorophyll 1-5 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-6 Leaflet chlorophyll 1-6 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-7 Leaflet chlorophyll 1-7 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-8 Leaflet chlorophyll 1-8 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_1-9 Leaflet chlorophyll 1-9 TO:0000495 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_2-1 Leaflet chlorophyll 2-1 TO:0000495 SOY_ref:SDS20160817.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper -SOY_QTL Leaflet_chlorophyll_3-1 Leaflet chlorophyll 3-1 TO:0000495 SOY_ref:JRS20180604.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-1 Leaflet chlorophyll 1-1 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-10 Leaflet chlorophyll 1-10 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-11 Leaflet chlorophyll 1-11 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-12 Leaflet chlorophyll 1-12 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-13 Leaflet chlorophyll 1-13 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-14 Leaflet chlorophyll 1-14 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-15 Leaflet chlorophyll 1-15 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-16 Leaflet chlorophyll 1-16 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-2 Leaflet chlorophyll 1-2 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-3 Leaflet chlorophyll 1-3 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-4 Leaflet chlorophyll 1-4 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-5 Leaflet chlorophyll 1-5 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-6 Leaflet chlorophyll 1-6 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-7 Leaflet chlorophyll 1-7 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-8 Leaflet chlorophyll 1-8 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_1-9 Leaflet chlorophyll 1-9 TO:0001140 SOY_ref:RGB20120302.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_2-1 Leaflet chlorophyll 2-1 TO:0001140 SOY_ref:SDS20160817.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper +SOY_QTL Leaflet_chlorophyll_3-1 Leaflet chlorophyll 3-1 TO:0001140 SOY_ref:JRS20180604.1 IDA T Leaflet chlorophyll content QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper SOY_QTL Leaflet_length_1-1 Leaflet length 1-1 TO:0001115 SOY_ref:IND90060637 IDA T Leaflet Length QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper SOY_QTL Leaflet_length_1-2 Leaflet length 1-2 TO:0001115 SOY_ref:IND90060637 IDA T Leaflet Length QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper SOY_QTL Leaflet_length_10-1 Leaflet length 10-1 TO:0001115 SOY_ref:RGB20110809.1 IDA T Leaflet Length QTL taxon:3847 20230110 SoyBase:Rex_Nelson|Planteome:Laurel_Cooper