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cooperl09 [Thu, 28 Aug 2025 22:29:57 +0000 (15:29 -0700)]
Moved annotations to TO:
0000170 elongation under submergence
cooperl09 [Thu, 28 Aug 2025 22:14:56 +0000 (15:14 -0700)]
Update to_qtl_glycine_SoyBase.assoc
Moved 31 annotations from TO:
0000114 flooding related trait to TO:
0000524 submergence tolerance
cooperl09 [Thu, 28 Aug 2025 22:03:23 +0000 (15:03 -0700)]
Moved 2 annotations to TO:
0000286
cooperl09 [Thu, 28 Aug 2025 19:43:20 +0000 (12:43 -0700)]
Moved 2 annotations to grain tenderness
cooperl09 [Fri, 22 Aug 2025 20:32:30 +0000 (13:32 -0700)]
Update to_qtl_Setaria_italica_Gramene.assoc
Moved annotations from cauline axillary branch number to stem branch number
cooperl09 [Fri, 22 Aug 2025 20:26:22 +0000 (13:26 -0700)]
Renamed axillary branch number
cooperl09 [Thu, 21 Aug 2025 19:10:39 +0000 (12:10 -0700)]
Moved annotation to TO:
0000031 silicon response
cooperl09 [Wed, 20 Aug 2025 21:50:57 +0000 (14:50 -0700)]
Moved annotations to TO:
0000437 plant male sterility
cooperl09 [Wed, 20 Aug 2025 21:48:59 +0000 (14:48 -0700)]
Fixing synonyms
cooperl09 [Mon, 18 Aug 2025 22:28:40 +0000 (15:28 -0700)]
Fixed conflicted changes
cooperl09 [Mon, 18 Aug 2025 22:09:01 +0000 (15:09 -0700)]
Fixed line length
cooperl09 [Mon, 18 Aug 2025 22:06:29 +0000 (15:06 -0700)]
Fixed line length
cooperl09 [Mon, 18 Aug 2025 18:05:32 +0000 (11:05 -0700)]
Noved i annotation to TO:
0000580
cooperl09 [Sat, 16 Aug 2025 18:49:03 +0000 (11:49 -0700)]
Fixed annotations
cooperl09 [Fri, 15 Aug 2025 22:11:59 +0000 (15:11 -0700)]
Removed duplicated lines
cooperl09 [Fri, 15 Aug 2025 20:57:27 +0000 (13:57 -0700)]
Moved annotations from pollen sterility (TO:
0000053) to TO:
0000437 male sterility
cooperl09 [Fri, 15 Aug 2025 20:49:07 +0000 (13:49 -0700)]
Moved annotations, fixed duplicated synonyms and refs
Laurel Cooper [Thu, 14 Aug 2025 23:04:10 +0000 (16:04 -0700)]
Moved two annotations to TO:
0000036
Laurel Cooper [Thu, 14 Aug 2025 22:58:58 +0000 (15:58 -0700)]
Adding curator xref
Laurel Cooper [Thu, 14 Aug 2025 22:53:45 +0000 (15:53 -0700)]
Removed a few more duplicated synonyms
Laurel Cooper [Thu, 14 Aug 2025 22:51:07 +0000 (15:51 -0700)]
Removed duplicated synonyms
Laurel Cooper [Thu, 14 Aug 2025 22:30:11 +0000 (15:30 -0700)]
Moved annotations from TO:
0000042 to parent term TO:
0000035 incompatibility trait
Laurel Cooper [Thu, 14 Aug 2025 22:25:50 +0000 (15:25 -0700)]
Moved annotations from TO:
0000036 and TO:
0000046 to parent term TO:
0000035 hybrid incompatibility
Laurel Cooper [Thu, 14 Aug 2025 20:37:18 +0000 (13:37 -0700)]
Fixed typo
cooperl09 [Tue, 12 Aug 2025 23:00:31 +0000 (16:00 -0700)]
Moved 1 annotation to grain quality TO:
0000162
cooperl09 [Mon, 11 Aug 2025 22:41:17 +0000 (15:41 -0700)]
Removed annotation to incorrect term
cooperl09 [Fri, 8 Aug 2025 16:59:43 +0000 (09:59 -0700)]
Filled in ref column
cooperl09 [Wed, 6 Aug 2025 17:03:45 +0000 (10:03 -0700)]
Added missing line return
cooperl09 [Tue, 5 Aug 2025 23:14:15 +0000 (16:14 -0700)]
Adding new file for Triticeae QTLs
cooperl09 [Tue, 5 Aug 2025 23:08:42 +0000 (16:08 -0700)]
Fixing filename
cooperl09 [Tue, 5 Aug 2025 20:29:40 +0000 (13:29 -0700)]
Fixed database name
cooperl09 [Tue, 5 Aug 2025 19:11:23 +0000 (12:11 -0700)]
Adding new file of oat QTLs from GrainGenes
cooperl09 [Fri, 1 Aug 2025 22:42:52 +0000 (15:42 -0700)]
Moved 3 QTLs to TO:
0000631
Laurel Cooper [Thu, 31 Jul 2025 22:15:37 +0000 (15:15 -0700)]
Removed 4 duplicated lines
cooperl09 [Thu, 31 Jul 2025 19:01:26 +0000 (12:01 -0700)]
Adding more barley QTLs, fixing annotations
cooperl09 [Wed, 30 Jul 2025 23:10:49 +0000 (16:10 -0700)]
Added line return at the end
cooperl09 [Wed, 30 Jul 2025 22:10:15 +0000 (15:10 -0700)]
Adding more annotations
cooperl09 [Wed, 30 Jul 2025 19:16:39 +0000 (12:16 -0700)]
Fixed typo
cooperl09 [Wed, 30 Jul 2025 19:05:51 +0000 (12:05 -0700)]
Adding test file of GrainGenes QTLs
Justin Elser [Tue, 29 Jul 2025 23:02:11 +0000 (16:02 -0700)]
Change all obsoleted GO terms with known replacements
cooperl09 [Mon, 28 Jul 2025 22:00:55 +0000 (15:00 -0700)]
Updated annotations to insect responses
cooperl09 [Mon, 28 Jul 2025 21:40:50 +0000 (14:40 -0700)]
Replaced 1 TO term, removed by mistake
cooperl09 [Mon, 28 Jul 2025 21:34:37 +0000 (14:34 -0700)]
Updated annotations to insect traits
Justin Elser [Mon, 28 Jul 2025 20:23:19 +0000 (13:23 -0700)]
Remove extra tab
cooperl09 [Mon, 28 Jul 2025 16:46:01 +0000 (09:46 -0700)]
Removed redundant annotation to parent term
cooperl09 [Fri, 25 Jul 2025 22:44:07 +0000 (15:44 -0700)]
Removed 10 annotated QTL as we have no evidence to support them
Laurel Cooper [Thu, 17 Jul 2025 20:18:21 +0000 (14:18 -0600)]
Moved IRRI germplasm files to a new folder
Laurel Cooper [Mon, 14 Jul 2025 22:11:27 +0000 (16:11 -0600)]
Moved 1 annotation to vivpary TO:
0000619 from seed dormancy
Laurel Cooper [Mon, 14 Jul 2025 22:08:56 +0000 (16:08 -0600)]
Moved 11 annotations from seed dormancy TO:
0000253 to New term- grain dormancy TO:
0001159
Laurel Cooper [Mon, 14 Jul 2025 22:05:11 +0000 (16:05 -0600)]
Moved annotations to vivpary TO:
0000619 from seed dormancy
Laurel Cooper [Mon, 14 Jul 2025 21:55:09 +0000 (15:55 -0600)]
Moved 11 annotations from seed dormancy TO:
0000253 to New term- grain dormancy TO:
0001159
Laurel Cooper [Mon, 14 Jul 2025 21:35:58 +0000 (15:35 -0600)]
Moved 164 rice QTLs from seed dormancy to grain dormancy TO:
0001159
Laurel Cooper [Mon, 14 Jul 2025 20:10:56 +0000 (14:10 -0600)]
Moved ND gene to tillering TO:
0000329
cooperl09 [Wed, 9 Jul 2025 18:21:45 +0000 (11:21 -0700)]
Moved annotations to new shoot axis length term TO:
0001158 and TO:
0000634 node #
cooperl09 [Tue, 8 Jul 2025 15:40:56 +0000 (08:40 -0700)]
Moved 2 QTLs to grain moisture TO:
0000057
Laurel Cooper [Wed, 2 Jul 2025 22:41:53 +0000 (15:41 -0700)]
Fixed annotations, removed duplicated synonyms
Laurel Cooper [Mon, 2 Jun 2025 19:00:12 +0000 (12:00 -0700)]
Sorted by accession #
Laurel Cooper [Mon, 2 Jun 2025 18:17:08 +0000 (11:17 -0700)]
Added header line
No duplicates
Laurel Cooper [Mon, 2 Jun 2025 17:57:49 +0000 (10:57 -0700)]
Added header line
No duplicates
Laurel Cooper [Mon, 2 Jun 2025 17:54:21 +0000 (10:54 -0700)]
Added header line
No Duplicates
Laurel Cooper [Mon, 2 Jun 2025 17:50:54 +0000 (10:50 -0700)]
Added header line
No duplicates
Laurel Cooper [Mon, 2 Jun 2025 17:47:52 +0000 (10:47 -0700)]
Added header line
No duplicates
cooperl09 [Fri, 30 May 2025 22:34:53 +0000 (15:34 -0700)]
Added column headings line
cooperl09 [Thu, 29 May 2025 22:27:56 +0000 (15:27 -0700)]
Removed 23,490 duplicated lines
cooperl09 [Sun, 25 May 2025 16:41:09 +0000 (09:41 -0700)]
Fixed reference
cooperl09 [Sat, 24 May 2025 18:10:12 +0000 (11:10 -0700)]
Fixed evidence code
Laurel Cooper [Fri, 23 May 2025 18:45:51 +0000 (11:45 -0700)]
Replaced IAGP with EXP evidence code
Laurel Cooper [Fri, 23 May 2025 18:42:17 +0000 (11:42 -0700)]
Replaced IAGP evidence code with EXP
Laurel Cooper [Fri, 9 May 2025 22:45:08 +0000 (15:45 -0700)]
Moved 7 qtl annotations to TO:
0000604
Laurel Cooper [Thu, 8 May 2025 21:51:15 +0000 (14:51 -0700)]
Moved 11 annotations from TO:
0000488 seed composition quality trait
cooperl09 [Thu, 8 May 2025 18:55:58 +0000 (11:55 -0700)]
Fixed annotation on WD! gene to TO:
0000604, which is a child of metabolite content trait
Justin Elser [Wed, 7 May 2025 14:14:15 +0000 (07:14 -0700)]
Change OB_Gene to Oryzabase to match dbxrefs.yaml
cooperl09 [Tue, 6 May 2025 19:51:07 +0000 (12:51 -0700)]
Added new test file of Oryzabase genes
cooperl09 [Mon, 5 May 2025 21:16:43 +0000 (14:16 -0700)]
Fixing typo in Oryza gene name
Error is coming from Gramene page
cooperl09 [Fri, 18 Apr 2025 18:52:38 +0000 (11:52 -0700)]
Fixed two mappings for maize QTLs
cooperl09 [Fri, 21 Mar 2025 22:34:58 +0000 (15:34 -0700)]
reverting test
cooperl09 [Fri, 21 Mar 2025 22:34:21 +0000 (15:34 -0700)]
testing
Laurel Cooper [Thu, 6 Mar 2025 19:09:07 +0000 (11:09 -0800)]
reverting test
Laurel Cooper [Thu, 6 Mar 2025 19:08:14 +0000 (11:08 -0800)]
test
Laurel Cooper [Tue, 4 Mar 2025 22:00:33 +0000 (14:00 -0800)]
Merge branch 'main' of https://gitlab.cqls.oregonstate.edu/jaiswal-lab/associations
cooperl09 [Tue, 4 Mar 2025 19:44:53 +0000 (11:44 -0800)]
Reverting test
cooperl09 [Tue, 4 Mar 2025 19:41:42 +0000 (11:41 -0800)]
Test
Laurel Cooper [Mon, 3 Mar 2025 22:12:12 +0000 (14:12 -0800)]
Create .gitignore
cooperl [Wed, 29 Jan 2025 18:25:17 +0000 (18:25 +0000)]
Fixing QTL annotations to TO:
0000439
svn path=/; revision=1137
cooperl [Tue, 7 Jan 2025 20:22:49 +0000 (20:22 +0000)]
Removing the test file
svn path=/; revision=1136
cooperl [Tue, 7 Jan 2025 20:22:01 +0000 (20:22 +0000)]
Adding annotations from Parul's test file
svn path=/; revision=1135
cooperl [Wed, 11 Dec 2024 19:29:27 +0000 (19:29 +0000)]
Adding new test file for Parul
svn path=/; revision=1134
cooperl [Wed, 11 Dec 2024 19:27:00 +0000 (19:27 +0000)]
Removing test file for Parul
svn path=/; revision=1133
cooperl [Tue, 19 Nov 2024 22:26:27 +0000 (22:26 +0000)]
Adding missing QTL name and reference DOI
svn path=/; revision=1132
cooperl [Tue, 19 Nov 2024 18:03:44 +0000 (18:03 +0000)]
Added annotations to xylem, Clusters 12,16
svn path=/; revision=1131
cooperl [Tue, 19 Nov 2024 17:55:47 +0000 (17:55 +0000)]
Adding a few missing gene names
svn path=/; revision=1130
cooperl [Tue, 19 Nov 2024 17:18:33 +0000 (17:18 +0000)]
Fixed a few gene names
svn path=/; revision=1129
cooperl [Mon, 18 Nov 2024 18:44:48 +0000 (18:44 +0000)]
Fixed a few gene names
M po_anatomy_gene_0ryza_poc.assoc
svn path=/; revision=1128
cooperl [Mon, 18 Nov 2024 16:32:49 +0000 (16:32 +0000)]
Fixed a few gene names and missing symbols
svn path=/; revision=1127
cooperl [Fri, 15 Nov 2024 18:32:25 +0000 (18:32 +0000)]
Fixed gene name
svn path=/; revision=1126
cooperl [Thu, 14 Nov 2024 19:38:32 +0000 (19:38 +0000)]
Fixed gene name
svn path=/; revision=1125
cooperl [Thu, 14 Nov 2024 18:08:54 +0000 (18:08 +0000)]
Fixed one gene name
svn path=/; revision=1124
cooperl [Tue, 12 Nov 2024 18:59:40 +0000 (18:59 +0000)]
Fixed gene name
svn path=/; revision=1123
cooperl [Thu, 7 Nov 2024 22:48:14 +0000 (22:48 +0000)]
Fixing gene name
svn path=/; revision=1122
cooperl [Wed, 6 Nov 2024 17:34:42 +0000 (17:34 +0000)]
Removing test file
svn path=/; revision=1121
projects / associations / .git / log