From 45fd83d321da5e512d37c6829001dd5676edf156 Mon Sep 17 00:00:00 2001 From: meiera Date: Sat, 12 Sep 2015 00:01:17 +0000 Subject: [PATCH] Removed duplicated lines from GO_ontology_IMP_gene_S.lycopersicum.assoc svn path=/; revision=542 --- .../GO_ontology_IMP_gene_S.lycopersicum.assoc | 60 ++++++++----------- 1 file changed, 24 insertions(+), 36 deletions(-) diff --git a/go-associations/Test_PPPP_GO/GO_ontology_IMP_gene_S.lycopersicum.assoc b/go-associations/Test_PPPP_GO/GO_ontology_IMP_gene_S.lycopersicum.assoc index 8c16877..64cb297 100644 --- a/go-associations/Test_PPPP_GO/GO_ontology_IMP_gene_S.lycopersicum.assoc +++ b/go-associations/Test_PPPP_GO/GO_ontology_IMP_gene_S.lycopersicum.assoc @@ -1,44 +1,32 @@ -SGN_gene 187 bsr4 plant-type hypersensitive response GO:0009626 25774204 IMP BP Solyc05g007850 bacterial spot resistance 4 gene taxon:4081 20150707 Ethan Johnson -SGN_gene 187 bsr4 defense response to bacterium GO:0042742 25774204 IMP BP Solyc05g007850 bacterial spot resistance 4 gene taxon:4081 20150707 Ethan Johnson -SGN_gene 5560 gamybl1 seed germination GO:0009845 25774204 IMP MF Solyc01g009070 gamyb-like 1 gene taxon:4081 20150707 Ethan Johnson -SGN_gene 961 man4 beta-mannosidase activity GO:0004567 25774204 IMP MF Solyc01g008710 mannan endo-1,4-beta-mannosidase gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] -SGN_gene 662 Gr floral organ abscission GO:0010227 25774204 IMP BP Solyc01g104340 green ripe gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009046] -SGN_gene 662 Gr fruit ripening GO:0009835 25774204 IMP BP Solyc01g104340 green ripe gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] -SGN_gene 1515 ddb1 plastid GO:0009536 25774204 IMP CC Solyc02g021650 UV damaged DNA binding protein 1 gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an floral meristem growth GO:0010451 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an inflorescence morphogenesis GO:0048281 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an floral meristem growth GO:0010451 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an inflorescence morphogenesis GO:0048281 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an floral meristem growth GO:0010451 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an inflorescence morphogenesis GO:0048281 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an floral meristem growth GO:0010451 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 128 an inflorescence morphogenesis GO:0048281 25774204 IMP BP Solyc02g081670 anantha gene taxon:4081 20150707 Ethan Johnson -SGN_gene 8213 CER6 regulation of response to water deprivation GO:2000070 25774204 IMP BP Solyc02g085870 beta-ketoacyl-coenzyme A synthase gene taxon:4081 20150707 Ethan Johnson -SGN_gene 4476 zep abscisic acid biosynthetic process GO:0009688 25774204 IMP BP Solyc02g090890 abscisic acid biosynthetic process gene taxon:4081 20150707 Ethan Johnson -SGN_gene 532 fa fertilization GO:0009566 25774204 IMP BP Solyc03g118160 falsiflora gene taxon:4081 20150707 Ethan Johnson +SGN_gene 1045 nr fruit ripening GO:0009835 25774204 IMP BP Solyc09g075440 Never ripe gene taxon:4081 20150707 Ethan Johnson SGN_gene 1296 mc indeterminate inflorescence morphogenesis GO:0048283 25774204 IMP BP Solyc05g012020 macrocalyx gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009049] SGN_gene 1296 rin fruit ripening GO:0009835 25774204 IMP BP Solyc05g056620 ripening inhibitor gene taxon:4081 20150707 Ethan Johnson SGN_gene 1322 sp meristem determinacy GO:0010022 25774204 IMP BP Solyc06g074350 self-pruning gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0000003] -SGN_gene 43107 Cul1 rejection of self pollen GO:0060320 25774204 IMP BP Solyc06g084520 Cul1 gene taxon:4081 20150707 Ethan Johnson +SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0000025] +SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] +SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009025] +SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009047] +SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0025508] +SGN_gene 1515 ddb1 plastid GO:0009536 25774204 IMP CC Solyc02g021650 UV damaged DNA binding protein 1 gene taxon:4081 20150707 Ethan Johnson +SGN_gene 187 bsr4 defense response to bacterium GO:0042742 25774204 IMP BP Solyc05g007850 bacterial spot resistance 4 gene taxon:4081 20150707 Ethan Johnson +SGN_gene 187 bsr4 plant-type hypersensitive response GO:0009626 25774204 IMP BP Solyc05g007850 bacterial spot resistance 4 gene taxon:4081 20150707 Ethan Johnson +SGN_gene 20827 rdr6 leaf morphogenesis GO:0009965 25774204 IMP BP Solyc04g014870 wiry gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0020039] +SGN_gene 212 bl meristem determinacy GO:0010022 25774204 IMP BP Solyc11g069030 blind gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009047] SGN_gene 43107 Cul1 pollen-pistil interaction GO:0009875 25774204 IMP BP Solyc06g084520 Cul1 gene taxon:4081 20150707 Ethan Johnson SGN_gene 43107 Cul1 regulation of pollen tube growth GO:0080092 25774204 IMP BP Solyc06g084520 Cul1 gene taxon:4081 20150707 Ethan Johnson -SGN_gene 483 etr2 fruit abscission GO:0060867 25774204 IMP BP Solyc07g056580 ethylene receptor 2 gene taxon:4081 20150707 Ethan Johnson -SGN_gene 661 gf chlorophyll catabolic process GO:0015996 25774204 IMP BP Solyc08g080090 green flesh gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] -SGN_gene 755 j growth GO:0040007 25774204 IMP BP Solyc11g010570 jointless gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009049] +SGN_gene 43107 Cul1 rejection of self pollen GO:0060320 25774204 IMP BP Solyc06g084520 Cul1 gene taxon:4081 20150707 Ethan Johnson +SGN_gene 43154 HT-A pollen tube growth GO:0009860 25774204 IMP BP AB066582 HT-A gene taxon:4081 20150707 Ethan Johnson +SGN_gene 43154 HT-A rejection of self pollen GO:0060320 25774204 IMP BP AB066584 HT-A gene taxon:4081 20150707 Ethan Johnson +SGN_gene 4476 zep abscisic acid biosynthetic process GO:0009688 25774204 IMP BP Solyc02g090890 abscisic acid biosynthetic process gene taxon:4081 20150707 Ethan Johnson SGN_gene 4504 GAI growth GO:0040007 25774204 IMP BP Solyc11g011260 GAI gene taxon:4081 20150707 Ethan Johnson SGN_gene 482 etr1 abscission GO:0009838 25774204 IMP BP Solyc12g011330 ethylene receptor 1 gene taxon:4081 20150707 Ethan Johnson SGN_gene 482 etr1 auxin efflux GO:0010315 25774204 IMP BP Solyc12g011330 ethylene receptor 1 gene taxon:4081 20150707 Ethan Johnson -SGN_gene 43154 HT-A rejection of self pollen GO:0060320 25774204 IMP BP AB066584 HT-A gene taxon:4081 20150707 Ethan Johnson -SGN_gene 43154 HT-A pollen tube growth GO:0009860 25774204 IMP BP AB066582 HT-A gene taxon:4081 20150707 Ethan Johnson -SGN_gene 212 bl meristem determinacy GO:0010022 25774204 IMP BP Solyc11g069030 blind gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0000003] -SGN_gene 212 bl meristem determinacy GO:0010022 25774204 IMP BP Solyc11g069030 blind gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009047] -SGN_gene 212 bl meristem determinacy GO:0010022 25774204 IMP BP Solyc11g069030 blind gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0000003] -SGN_gene 1045 nr fruit ripening GO:0009835 25774204 IMP BP Solyc09g075440 Never ripe gene taxon:4081 20150707 Ethan Johnson -SGN_gene 1465 APS1 positive gravitropism GO:0009958 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0020127] -SGN_gene 1465 APS1 positive gravitropism GO:0009958 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0020127] -SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0000025] -SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009025] -SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] -SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009047] -SGN_gene 1465 APS1 starch biosynthetic process GO:0019252 25774204 IMP BP APS1 APS1 gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0025508] -SGN_gene 20827 rdr6 leaf morphogenesis GO:0009965 25774204 IMP BP Solyc04g014870 wiry gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0020039] \ No newline at end of file +SGN_gene 483 etr2 fruit abscission GO:0060867 25774204 IMP BP Solyc07g056580 ethylene receptor 2 gene taxon:4081 20150707 Ethan Johnson +SGN_gene 532 fa fertilization GO:0009566 25774204 IMP BP Solyc03g118160 falsiflora gene taxon:4081 20150707 Ethan Johnson +SGN_gene 5560 gamybl1 seed germination GO:0009845 25774204 IMP MF Solyc01g009070 gamyb-like 1 gene taxon:4081 20150707 Ethan Johnson +SGN_gene 661 gf chlorophyll catabolic process GO:0015996 25774204 IMP BP Solyc08g080090 green flesh gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] +SGN_gene 662 Gr floral organ abscission GO:0010227 25774204 IMP BP Solyc01g104340 green ripe gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009046] +SGN_gene 662 Gr fruit ripening GO:0009835 25774204 IMP BP Solyc01g104340 green ripe gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] +SGN_gene 755 j growth GO:0040007 25774204 IMP BP Solyc11g010570 jointless gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009049] +SGN_gene 8213 CER6 regulation of response to water deprivation GO:2000070 25774204 IMP BP Solyc02g085870 beta-ketoacyl-coenzyme A synthase gene taxon:4081 20150707 Ethan Johnson +SGN_gene 961 man4 beta-mannosidase activity GO:0004567 25774204 IMP MF Solyc01g008710 mannan endo-1,4-beta-mannosidase gene taxon:4081 20150707 Ethan Johnson occurs_in [PO:0009001] -- 2.34.1