From 49eaa389920e8e7c9fd47483921124eec0f49368 Mon Sep 17 00:00:00 2001 From: preecej Date: Fri, 28 Mar 2014 00:48:01 +0000 Subject: [PATCH] wip: generate_reactome_files option svn path=/; revision=563 --- Personnel/preecej/python_singletons/incomparanoid.py | 1 + 1 file changed, 1 insertion(+) diff --git a/Personnel/preecej/python_singletons/incomparanoid.py b/Personnel/preecej/python_singletons/incomparanoid.py index a298804..15aca22 100755 --- a/Personnel/preecej/python_singletons/incomparanoid.py +++ b/Personnel/preecej/python_singletons/incomparanoid.py @@ -295,6 +295,7 @@ parser.add_argument('-p', '--projection_prefix', help='add a platform-specific p parser.add_argument('-c', '--comparison_file_path', help='output file containing statistical comparisons') parser.add_argument('-E', '--ensembl_output_path', help='output file containing flat (1-to-many) ensemble ortho pairs') parser.add_argument('-I', '--inparanoid_output_path', help='output file containing flat (1-to-many) inparanoid ortho pairs') +parser.add_argument('-g', '--generate_reactome_files', help='produce ortho_pair files required by Reactome projection inference script', action="store_true") args = parser.parse_args() #print args -- 2.34.1