From 648e9947d07a81fd1f6fb612c40b4a1f8945a525 Mon Sep 17 00:00:00 2001
From: preecej <preecej@localhost>
Date: Fri, 8 Jul 2011 00:45:46 +0000
Subject: [PATCH] Stashing local copies of LocalSettings.php for safekeeping

svn path=/; revision=117
---
 .../LocalSettings/dev.LocalSettings.php       | 166 ++++++++++++++++++
 .../proto.LocalSettings.php}                  |  11 +-
 2 files changed, 173 insertions(+), 4 deletions(-)
 create mode 100644 preecej/semantic_wiki/LocalSettings/dev.LocalSettings.php
 rename preecej/semantic_wiki/{LocalSettings.php => LocalSettings/proto.LocalSettings.php} (95%)

diff --git a/preecej/semantic_wiki/LocalSettings/dev.LocalSettings.php b/preecej/semantic_wiki/LocalSettings/dev.LocalSettings.php
new file mode 100644
index 0000000..5f89aa8
--- /dev/null
+++ b/preecej/semantic_wiki/LocalSettings/dev.LocalSettings.php
@@ -0,0 +1,166 @@
+<?php
+
+# This file was automatically generated by the MediaWiki installer.
+# If you make manual changes, please keep track in case you need to
+# recreate them later.
+#
+# See includes/DefaultSettings.php for all configurable settings
+# and their default values, but don't forget to make changes in _this_
+# file, not there.
+#
+# Further documentation for configuration settings may be found at:
+# http://www.mediawiki.org/wiki/Manual:Configuration_settings
+
+# If you customize your file layout, set $IP to the directory that contains
+# the other MediaWiki files. It will be used as a base to locate files.
+if( defined( 'MW_INSTALL_PATH' ) ) {
+	$IP = MW_INSTALL_PATH;
+} else {
+	$IP = dirname( __FILE__ );
+}
+
+$path = array( $IP, "$IP/includes", "$IP/languages" );
+set_include_path( implode( PATH_SEPARATOR, $path ) . PATH_SEPARATOR . get_include_path() );
+
+require_once( "$IP/includes/DefaultSettings.php" );
+
+if ( $wgCommandLineMode ) {
+	if ( isset( $_SERVER ) && array_key_exists( 'REQUEST_METHOD', $_SERVER ) ) {
+		die( "This script must be run from the command line\n" );
+	}
+}
+## Uncomment this to disable output compression
+# $wgDisableOutputCompression = true;
+
+$wgSitename         = "Planteome Annotation Wiki - Development";
+
+## The URL base path to the directory containing the wiki;
+## defaults for all runtime URL paths are based off of this.
+## For more information on customizing the URLs please see:
+## http://www.mediawiki.org/wiki/Manual:Short_URL
+$wgScriptPath       = "/w";
+$wgArticlePath      = "/wiki/$1";
+$wgUsePathInfo      = true;
+$wgScriptExtension  = ".php5";
+
+## The relative URL path to the skins directory
+$wgStylePath        = "$wgScriptPath/skins";
+
+## The relative URL path to the logo.  Make sure you change this from the default,
+## or else you'll overwrite your logo when you upgrade!
+$wgLogo             = "$wgStylePath/common/images/wiki_logo_proto.png";
+
+## UPO means: this is also a user preference option
+
+$wgEnableEmail      = true;
+$wgEnableUserEmail  = true; # UPO
+
+$wgEmergencyContact = "preecej@science.oregonstate.edu";
+$wgPasswordSender = "preecej@science.oregonstate.edu";
+
+$wgEnotifUserTalk = true; # UPO
+$wgEnotifWatchlist = true; # UPO
+$wgEmailAuthentication = true;
+
+## Database settings
+$wgDBtype           = "mysql";
+$wgDBserver         = "localhost";
+$wgDBname           = "dev_planteome_annotate";
+$wgDBuser           = "p_a_wiki_db";
+$wgDBpassword       = "1yCoP3r5icuM";
+$JobRunRate       = 1;
+
+# MySQL specific settings
+$wgDBprefix         = "";
+
+# MySQL table options to use during installation or update
+$wgDBTableOptions   = "ENGINE=InnoDB, DEFAULT CHARSET=binary";
+
+# Experimental charset support for MySQL 4.1/5.0.
+$wgDBmysql5 = true;
+
+## Shared memory settings
+$wgMainCacheType = CACHE_NONE;
+$wgMemCachedServers = array();
+
+## To enable image uploads, make sure the 'images' directory
+## is writable, then set this to true:
+$wgEnableUploads       = false;
+$wgUseImageMagick = true;
+$wgImageMagickConvertCommand = "/usr/bin/convert";
+
+## If you use ImageMagick (or any other shell command) on a
+## Linux server, this will need to be set to the name of an
+## available UTF-8 locale
+$wgShellLocale = "en_US.utf8";
+
+## If you want to use image uploads under safe mode,
+## create the directories images/archive, images/thumb and
+## images/temp, and make them all writable. Then uncomment
+## this, if it's not already uncommented:
+# $wgHashedUploadDirectory = false;
+
+## If you have the appropriate support software installed
+## you can enable inline LaTeX equations:
+$wgUseTeX           = false;
+
+## Set $wgCacheDirectory to a writable directory on the web server
+## to make your wiki go slightly faster. The directory should not
+## be publically accessible from the web.
+#$wgCacheDirectory = "$IP/cache";
+
+$wgLocalInterwiki   = strtolower( $wgSitename );
+
+$wgLanguageCode = "en";
+
+$wgSecretKey = "c7f2e0aee38b819689a65337257ed2d6c4eb7157e44563781da69bbfd3e2e45b";
+
+## Default skin: you can change the default skin. Use the internal symbolic
+## names, ie 'vector', 'monobook':
+$wgDefaultSkin = 'vector';
+
+## For attaching licensing metadata to pages, and displaying an
+## appropriate copyright notice / icon. GNU Free Documentation
+## License and Creative Commons licenses are supported so far.
+$wgEnableCreativeCommonsRdf = true;
+$wgRightsPage = ""; # Set to the title of a wiki page that describes your license/copyright
+$wgRightsUrl = "http://creativecommons.org/licenses/by-nc-sa/3.0/";
+$wgRightsText = "Attribution-NonCommercial-ShareAlike 3.0 Unported";
+$wgRightsIcon = "http://i.creativecommons.org/l/by-nc-sa/3.0/88x31.png";
+# $wgRightsCode = "[license_code]"; # Not yet used
+
+$wgDiff3 = "/usr/bin/diff3";
+
+# BEGIN: Justin Preece - Config changes and Semantic Bundle (SMW and other extensions)
+# (moved from top of file to address premature reference to $wgScriptPath)
+
+$wgHiddenPrefs[] = 'skin';
+$wgUseAjax = true;
+
+#include_once("$IP/extensions/DataTransfer_PS/DataTransfer.php");
+
+require_once( "$IP/extensions/semantic-bundle/SemanticBundleSettings.php" );
+require_once( "$IP/extensions/semantic-bundle/SemanticBundle.php" );
+
+include("$IP/extensions/SimpleForms/SimpleForms.php");
+
+$sfgAutocompletionURLs['remote_species'] = 'http://palea.cgrb.oregonstate.edu/AnnoWiki/prototyping/remote_autocomplete.php?q=<substr>';
+$sfgAutocompleteOnAllChars = false;
+
+# END: Justin Preece - Semantic Bundle (SMW and other extensions)
+
+/** Allow client-side caching of pages */
+$wgCachePages       = false;
+
+/**
+        *  * Set this to current time to invalidate all prior cached pages. Affects both
+        *   * client- and server-side caching.
+        *    * You can get the current date on your server by using the command:
+        *     *   date +%Y%m%d%H%M%S
+        *      */
+$wgCacheEpoch = 'date +%Y%m%d%H%M%S';
+
+
+# When you make changes to this configuration file, this will make
+# sure that cached pages are cleared.
+$wgCacheEpoch = max( $wgCacheEpoch, gmdate( 'YmdHis', @filemtime( __FILE__ ) ) );
diff --git a/preecej/semantic_wiki/LocalSettings.php b/preecej/semantic_wiki/LocalSettings/proto.LocalSettings.php
similarity index 95%
rename from preecej/semantic_wiki/LocalSettings.php
rename to preecej/semantic_wiki/LocalSettings/proto.LocalSettings.php
index 3c02af7..c3c81a1 100644
--- a/preecej/semantic_wiki/LocalSettings.php
+++ b/preecej/semantic_wiki/LocalSettings/proto.LocalSettings.php
@@ -32,7 +32,7 @@ if ( $wgCommandLineMode ) {
 ## Uncomment this to disable output compression
 # $wgDisableOutputCompression = true;
 
-$wgSitename         = "PlantSemantics";
+$wgSitename         = "Planteome Annotation Wiki - Prototype";
 
 ## The URL base path to the directory containing the wiki;
 ## defaults for all runtime URL paths are based off of this.
@@ -65,8 +65,8 @@ $wgEmailAuthentication = true;
 ## Database settings
 $wgDBtype           = "mysql";
 $wgDBserver         = "localhost";
-$wgDBname           = "PlantSemantics";
-$wgDBuser           = "ps_wiki_db";
+$wgDBname           = "proto_planteome_annotate";
+$wgDBuser           = "p_a_wiki_db";
 $wgDBpassword       = "1yCoP3r5icuM";
 $wgJobRunRate       = 1;
 
@@ -117,7 +117,7 @@ $wgSecretKey = "2030c0cc408640a1809ec82a9fb16e660d9988a63aeb77871a94c94a5f2d2c56
 
 ## Default skin: you can change the default skin. Use the internal symbolic
 ## names, ie 'vector', 'monobook':
-$wgDefaultSkin = 'monobook';
+$wgDefaultSkin = 'planteome';
 
 ## For attaching licensing metadata to pages, and displaying an
 ## appropriate copyright notice / icon. GNU Free Documentation
@@ -133,6 +133,7 @@ $wgDiff3 = "/usr/bin/diff3";
 
 
 # BEGIN 04/04/11: Justin Preece - Add'l Extensions
+$wgHiddenPrefs[] = 'skin';
 $wgUseAjax = true;
 include("$IP/extensions/SimpleForms/SimpleForms.php");
 require_once( "$IP/extensions/ParserFunctions/ParserFunctions.php" );
@@ -143,6 +144,8 @@ $wgPFEnableStringFunctions = true;
 # BEGIN 02/22/11: Justin Preece - Semantic Bundle (SMW and other extensions)
 # (moved from top of file to address premature reference to $wgScriptPath)
 
+#include_once("$IP/extensions/DataTransfer_PS/DataTransfer.php");
+
 require_once( "$IP/extensions/semantic-bundle/SemanticBundleSettings.php" );
 require_once( "$IP/extensions/semantic-bundle/SemanticBundle.php" );
 
-- 
2.34.1