From 83504b332431f2ef991d9f70e3ca4905a6c6a7a4 Mon Sep 17 00:00:00 2001 From: Laurel Cooper Date: Sat, 30 Aug 2025 16:14:44 -0700 Subject: [PATCH] Fixed 2 annotations --- to-associations/to_gene_Oryza_Gramene.assoc | 7 +++---- to-associations/to_protein_Oryza_Gramene.assoc | 1 - 2 files changed, 3 insertions(+), 5 deletions(-) diff --git a/to-associations/to_gene_Oryza_Gramene.assoc b/to-associations/to_gene_Oryza_Gramene.assoc index 9ac266d..e5a257c 100644 --- a/to-associations/to_gene_Oryza_Gramene.assoc +++ b/to-associations/to_gene_Oryza_Gramene.assoc @@ -535,10 +535,9 @@ GR_gene GR:0060332 FLO TO:0000196 GR_REF:5830 IMP T FLOURY ENDOSPERM flo(t)*|f GR_gene GR:0060332 FLO TO:0000266 GR_REF:5830 IMP T FLOURY ENDOSPERM flo(t)*|floury endosperm|flo3|floury endosperm-3|flo3|floury endosperm-3 gene taxon:4530 20121108 Gramene GR_gene GR:0060365 GH1 TO:0000264 GR_REF:5666 IMP T GOLD HULL AND INTERNODE 1 hg|gh1|gold hull and internode-1|gh1|gold hull and internode-1 gene taxon:4530 20121108 Gramene GR_gene GR:0060365 GH1 TO:0000426 GR_REF:5666 IMP T GOLD HULL AND INTERNODE 1 hg|gh1|gold hull and internode-1|gh1|gold hull and internode-1 gene taxon:4530 20121108 Gramene -GR_gene GR:0060366 GH2 TO:0000264 GR_REF:5652 IMP T GOLD HULL AND INTERNODE 2 OsCAD2|CAD2|Cinnamyl alcohol dehydrogenase|Sinapyl alcohol dehydrogenase|gh2|gold hull and internode-2|gh2|gold hull and internode-2|LOC_Os02g09490 gene taxon:4530 20121108 Gramene -GR_gene GR:0060366 GH2 TO:0000426 GR_REF:5652 IMP T GOLD HULL AND INTERNODE 2 OsCAD2|CAD2|Cinnamyl alcohol dehydrogenase|Sinapyl alcohol dehydrogenase|gh2|gold hull and internode-2|gh2|gold hull and internode-2|LOC_Os02g09490 gene taxon:4530 20121108 Gramene -GR_gene GR:0060366 GH2 TO:0000732 GR_REF:5652 IMP T GOLD HULL AND INTERNODE 2 OsCAD2|CAD2|Cinnamyl alcohol dehydrogenase|Sinapyl alcohol dehydrogenase|gh2|gold hull and internode-2|gh2|gold hull and internode-2|LOC_Os02g09490 gene taxon:4530 20121108 Gramene -GR_gene GR:0060366 GH2 TO:0000733 GR_REF:5652 IMP T GOLD HULL AND INTERNODE 2 OsCAD2|CAD2|Cinnamyl alcohol dehydrogenase|Sinapyl alcohol dehydrogenase|gh2|gold hull and internode-2|gh2|gold hull and internode-2|LOC_Os02g09490 gene taxon:4530 20121108 Gramene +GR_gene GR:0060366 GH2 TO:0000264 GR_REF:5652 IMP T GOLD HULL AND INTERNODE 2 OsCAD2|CAD2|Cinnamyl alcohol dehydrogenase|Sinapyl alcohol dehydrogenase|gh2|gold hull and internode-2|LOC_Os02g09490 gene taxon:4530 20121108 Gramene +GR_gene GR:0060366 GH2 TO:0000426 GR_REF:5652 IMP T GOLD HULL AND INTERNODE 2 OsCAD2|CAD2|Cinnamyl alcohol dehydrogenase|Sinapyl alcohol dehydrogenase|gh2|gold hull and internode-2|LOC_Os02g09490 gene taxon:4530 20121108 Gramene +GR_gene GR:0060366 GH2 TO:0000733 GR_REF:5652 IMP T GOLD HULL AND INTERNODE 2 OsCAD2|CAD2|Cinnamyl alcohol dehydrogenase|Sinapyl alcohol dehydrogenase|gh2|gold hull and internode-2|LOC_Os02g09490 gene taxon:4530 20121108 Gramene GR_gene GR:0060367 GH3 TO:0000264 GR_REF:1725 IMP T GOLD HULL AND INTERNODE 3 gh3|gold hull and internode-3|gh3|gold hull and internode-3 gene taxon:4530 20121108 Gramene GR_gene GR:0060367 GH3 TO:0000426 GR_REF:1725 IMP T GOLD HULL AND INTERNODE 3 gh3|gold hull and internode-3|gh3|gold hull and internode-3 gene taxon:4530 20121108 Gramene GR_gene GR:0060411 GLUP1 TO:0000490 GR_REF:3906 IMP T GLUTELIN PRECURSOR 1 Gup1|Esp5|Glup1|Glutelin precursor-1|Glup1|Glutelin precursor-1 gene taxon:4530 20121108 Gramene diff --git a/to-associations/to_protein_Oryza_Gramene.assoc b/to-associations/to_protein_Oryza_Gramene.assoc index 2f11313..02badfa 100644 --- a/to-associations/to_protein_Oryza_Gramene.assoc +++ b/to-associations/to_protein_Oryza_Gramene.assoc @@ -250,7 +250,6 @@ GR_protein Q6Z5I0 CPS2 TO:0000357 GR_REF:11073 IC T ent-copalyl diphosphate sy GR_protein Q6Z5I0 CPS2 TO:0000599 GR_REF:11073 IC T ent-copalyl diphosphate synthase 2 OsCPS2|OsCPSL1|P0689H05.16|Putative kaurene synthase A|cps2 protein taxon:39947 20060831 Gramene GR_protein Q6Z5J6 KS5 TO:0000599 GR_REF:11089 IC T Putative ent-kaurene synthase B P0689H05.20 protein taxon:39947 20080220 Gramene GR_protein Q6Z5J6 KS5 TO:0000357 GR_REF:11089 IC T Putative ent-kaurene synthase B P0689H05.20 protein taxon:39947 20080220 Gramene -GR_protein Q6ZHS4 OJ1145_F01.6 TO:0000732 GR_REF:11089 IC T Putative cinnamyl-alcohol dehydrogenase CAD2|Cinnamyl alcohol dehydrogenase|OJ1073_F05.31|OJ1145_F01.6|OsCAD2|SAD|Sinapyl alcohol dehydrogenase protein taxon:39947 20060831 Gramene GR_protein Q6ZHS4 OJ1145_F01.6 TO:0000264 GR_REF:11089 IC T Putative cinnamyl-alcohol dehydrogenase CAD2|Cinnamyl alcohol dehydrogenase|OJ1073_F05.31|OJ1145_F01.6|OsCAD2|SAD|Sinapyl alcohol dehydrogenase protein taxon:39947 20060831 Gramene GR_protein Q6ZHS4 OJ1145_F01.6 TO:0000733 GR_REF:11089 IC T Putative cinnamyl-alcohol dehydrogenase CAD2|Cinnamyl alcohol dehydrogenase|OJ1073_F05.31|OJ1145_F01.6|OsCAD2|SAD|Sinapyl alcohol dehydrogenase protein taxon:39947 20060831 Gramene GR_protein Q6ZHS4 OJ1145_F01.6 TO:0000426 GR_REF:11089 IC T Putative cinnamyl-alcohol dehydrogenase CAD2|Cinnamyl alcohol dehydrogenase|OJ1073_F05.31|OJ1145_F01.6|OsCAD2|SAD|Sinapyl alcohol dehydrogenase protein taxon:39947 20060831 Gramene -- 2.34.1