From c91a813c3d05a81bae5e2da731af0002ca2cedc5 Mon Sep 17 00:00:00 2001 From: elserj Date: Wed, 27 Jun 2012 22:21:08 +0000 Subject: [PATCH] Removed associations to obsoleted terms svn path=/; revision=334 --- po-associations/po_anatomy_gene_Nicotiana_sgn.assoc | 1 - po-associations/po_anatomy_gene_Petunia_sgn.assoc | 1 - .../po_anatomy_gene_S.lycopersicum_sgn.assoc | 1 - po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc | 1 - po-associations/po_anatomy_gene_arabidopsis_tair.assoc | 10 ---------- po-associations/po_anatomy_gene_oryza_gramene.assoc | 1 - 6 files changed, 15 deletions(-) diff --git a/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc b/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc index 77ec8fa..cd9f356 100644 --- a/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc +++ b/po-associations/po_anatomy_gene_Nicotiana_sgn.assoc @@ -3,7 +3,6 @@ SGN_gene 4502 CYP82E4v2 PO:0009025 PMID:16192354 IEP NCBI_gi:74475185 A CYP82E4 SGN_gene 6727 pmt3 PO:0009005 PMID:10965939 IEP NCBI_gi:9453833 A putrescine N-methyltransferase 3 NtPMT3 gene taxon:4085 20090630 SGN SGN_gene 6728 pmt1 PO:0009005 PMID:10598105 IEP NCBI_gi:6523838 A putrescine N-methyltransferase 1 NtPMT1a gene taxon:4085 20090626 SGN SGN_gene 6729 pmt PO:0009005 PMID:10598105 IEP NCBI_gi:9957223 A putrescine N-Methyltransferase gene taxon:4085 20090626 SGN -SGN_gene 6870 NtCP56 PO:0020091 PMID:19246592 IEP NCBI_gi:172052259 A cysteine protease 2 gene taxon:4085 20090817 SGN SGN_gene 6886 CN PO:0006340 PMID:19191020 IEP NCBI_gi:126571550 A TMV resistance protein N (CN) N gene taxon:4085 20090216 SGN SGN_gene 7240 A622 PO:0000025 PMID:12369619 IEP NCBI_gi:18149186 A isoflavone reductase A622 gene taxon:4085 20090626 SGN SGN_gene 7256 rsg PO:0009047 PMID:10852936 IEP NCBI_gi:8777511 A bZIP transcriptional activator gene taxon:4085 20090730 SGN diff --git a/po-associations/po_anatomy_gene_Petunia_sgn.assoc b/po-associations/po_anatomy_gene_Petunia_sgn.assoc index c9fdeb1..d8b1ffe 100644 --- a/po-associations/po_anatomy_gene_Petunia_sgn.assoc +++ b/po-associations/po_anatomy_gene_Petunia_sgn.assoc @@ -23,7 +23,6 @@ SGN_gene 8298 MAW PO:0009032 PMID:19717616 IEP A MAEWEST gene taxon:4101 2009 SGN_gene 8298 MAW PO:0000021 PMID:19717616 IMP A MAEWEST gene taxon:4101 20091023 SGN SGN_gene 8298 MAW PO:0000017 PMID:19717616 IEP A MAEWEST gene taxon:4101 20091023 SGN SGN_gene 8298 MAW PO:0005647 PMID:19717616 IMP A MAEWEST gene taxon:4101 20091023 SGN -SGN_gene 8298 MAW PO:0004706 PMID:19717616 IEP A MAEWEST gene taxon:4101 20091023 SGN SGN_gene 8298 MAW PO:0004705 PMID:19717616 IEP A MAEWEST gene taxon:4101 20091023 SGN SGN_gene 8299 CHSU PO:0009032 PMID:19717616 IMP A CHORIPETALA SUZANNE gene taxon:4101 20091023 SGN SGN_gene 8299 CHSU PO:0009062 PMID:19717616 IMP A CHORIPETALA SUZANNE gene taxon:4101 20091023 SGN diff --git a/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc b/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc index ddb8f27..6bd3937 100644 --- a/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc +++ b/po-associations/po_anatomy_gene_S.lycopersicum_sgn.assoc @@ -22,7 +22,6 @@ SGN_gene 88 ao2 PO:0009001 PMID:11018259 IEP A aldehyde oxidase 2 TAO2|AO2|Sol SGN_gene 88 ao2 PO:0009006 PMID:11018259 IEP A aldehyde oxidase 2 TAO2|AO2|Solyc01g088170 gene taxon:4081 20080612 SGN SGN_gene 128 an PO:0009049 SGN_ref:861 IMP A anantha an^1|an^2|ca|Solyc02g081670 gene taxon:4081 20071016 SGN SGN_gene 153 arg1 PO:0009005 PMID:15322128 IEP NCBI_gi:54648779 A arginase 1 LeARG1|ARG1|Solyc01g091160 gene taxon:4081 20090723 SGN -SGN_gene 370 hsp17d4 PO:0020091 PMID:19854799 IEP A cytosolic class II small heat shock protein HCT2 (HSP17.4) HSP17.4 gene taxon:4081 20100312 SGN SGN_gene 370 hsp17d4 PO:0009046 PMID:19854799 IEP A cytosolic class II small heat shock protein HCT2 (HSP17.4) HSP17.4 gene taxon:4081 20100312 SGN SGN_gene 370 hsp17d4 PO:0009025 PMID:19854799 IEP A cytosolic class II small heat shock protein HCT2 (HSP17.4) HSP17.4 gene taxon:4081 20100312 SGN SGN_gene 370 hsp17d4 PO:0009066 PMID:19854799 IEP A cytosolic class II small heat shock protein HCT2 (HSP17.4) HSP17.4 gene taxon:4081 20100312 SGN diff --git a/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc b/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc index 7ff58f1..839d356 100644 --- a/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc +++ b/po-associations/po_anatomy_gene_S.tuberosum_sgn.assoc @@ -10,6 +10,5 @@ SGN_gene 1848 sus4 PO:0004543 PMID:2964386 IEP NCBI_gi:169571 A sucrose synthas SGN_gene 1898 RFP1 PO:0009008 PMID:20042252 IEP NCBI_gi:118490012 A RING-H2 finger protein gene 1 EF091877|StRFP1 gene taxon:4113 20100426 SGN SGN_gene 1974 pmt PO:0004543 PMID:16088399 IEP NCBI_gi:38174782 A putrescine N-methyltransferase gene taxon:4113 20090625 SGN SGN_gene 1975 spdsy PO:0000003 PMID:16088399 IEP NCBI_gi:15150054 A spermidine synthase SpdSy gene taxon:4113 20090625 SGN -SGN_gene 1976 CP100 PO:0006345 PMID:9106515 IEP NCBI_gi:1030067 A isoflavone reductase X92075 gene taxon:4113 20091211 SGN SGN_gene 1976 CP100 PO:0009062 PMID:9106515 IEP NCBI_gi:1030067 A isoflavone reductase X92075 gene taxon:4113 20091211 SGN SGN_gene 2422 bel5 PO:0004543 PMID:17921341 IEP A BEL1-related homeotic protein 5 Bel5|StBel5 gene taxon:4113 20080124 SGN diff --git a/po-associations/po_anatomy_gene_arabidopsis_tair.assoc b/po-associations/po_anatomy_gene_arabidopsis_tair.assoc index a399626..9f98bd7 100644 --- a/po-associations/po_anatomy_gene_arabidopsis_tair.assoc +++ b/po-associations/po_anatomy_gene_arabidopsis_tair.assoc @@ -523,7 +523,6 @@ TAIR locus:2074587 COL2 PO:0009047 TAIR:Publication:501680195|PMID:11359606 IEP TAIR locus:2133950 IRT2 PO:0006036 TAIR:Publication:501680206|PMID:11389759 IEP S AT4G19680 AT4G19680|IRT2|ATIRT2|iron regulated transporter 2|T16H5.40|T16H5_40 protein taxon:3702 20031011 TAIR TAIR:locus:2133950 TAIR locus:2171427 KAN PO:0000015 TAIR:Publication:501680717|PMID:11395775 IDA S AT5G16560 AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31 protein taxon:3702 20081007 TAIR TAIR:locus:2171427 TAIR locus:2171427 KAN PO:0004703 TAIR:Publication:501680717|PMID:11395775 IDA S AT5G16560 AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31 protein taxon:3702 20081008 TAIR TAIR:locus:2171427 -TAIR locus:2171427 KAN PO:0004706 TAIR:Publication:501680717|PMID:11395775 IDA S AT5G16560 AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31 protein taxon:3702 20081008 TAIR TAIR:locus:2171427 TAIR locus:2171427 KAN PO:0009009 TAIR:Publication:501680717|PMID:11395775 IDA S AT5G16560 AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31 protein taxon:3702 20081007 TAIR TAIR:locus:2171427 TAIR locus:2171427 KAN PO:0009035 TAIR:Publication:501680717|PMID:11395775 IDA S AT5G16560 AT5G16560|KAN|KAN1|KANADI|KANADI 1|MQK4.31|MQK4_31 protein taxon:3702 20081008 TAIR TAIR:locus:2171427 TAIR locus:2009061 IP5PI PO:0000013 TAIR:Publication:501680756|PMID:11402208 IEP S AT1G34120 AT1G34120|IP5PI|AT5P1|ATIP5PI|AT5PTASE1|inositol polyphosphate 5-phosphatase I|MYO-INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 1|F12G12.6|F12G12_6|INOSITOL POLYPHOSPHATE 5-PHOSPHATASE I|INOSITOL POLYPHOSPHATE 5-PHOSPHATASE AT5P1 protein taxon:3702 20080924 TAIR TAIR:locus:2009061 @@ -315367,7 +315366,6 @@ TAIR locus:2065873 AT2G31690.1 PO:0009001 TAIR:Publication:501720678|PMID:17259 TAIR locus:2065873 AT2G31690.1 PO:0009005 TAIR:Publication:501720678|PMID:17259290 IEP S AT2G31690 AT2G31690|T9H9.21|T9H9_21 protein taxon:3702 20070510 TAIR TAIR:locus:2065873 TAIR locus:2065873 AT2G31690.1 PO:0009046 TAIR:Publication:501720678|PMID:17259290 IEP S AT2G31690 AT2G31690|T9H9.21|T9H9_21 protein taxon:3702 20070510 TAIR TAIR:locus:2065873 TAIR locus:2065873 AT2G31690.1 PO:0009053 TAIR:Publication:501720678|PMID:17259290 IEP S AT2G31690 AT2G31690|T9H9.21|T9H9_21 protein taxon:3702 20070510 TAIR TAIR:locus:2065873 -TAIR locus:2149725 TAAC PO:0004706 TAIR:Publication:501720675|PMID:17261580 IEP S AT5G01500 AT5G01500|TAAC|thylakoid ATP/ADP carrier|F7A7.20|F7A7_20 protein taxon:3702 20070426 TAIR TAIR:locus:2149725 TAIR locus:2149725 TAAC PO:0009001 TAIR:Publication:501720675|PMID:17261580 IEP S AT5G01500 AT5G01500|TAAC|thylakoid ATP/ADP carrier|F7A7.20|F7A7_20 protein taxon:3702 20070426 TAIR TAIR:locus:2149725 TAIR locus:2149725 TAAC PO:0009025 TAIR:Publication:501720675|PMID:17261580 IEP S AT5G01500 AT5G01500|TAAC|thylakoid ATP/ADP carrier|F7A7.20|F7A7_20 protein taxon:3702 20070426 TAIR TAIR:locus:2149725 TAIR locus:2120402 PCAP1 PO:0000013 TAIR:Publication:501720666|PMID:17264065 IEP S AT4G20260 AT4G20260|ATPCAP1|PCAP1|MDP25|ARABIDOPSIS THALIANA PLASMA-MEMBRANE ASSOCIATED CATION-BINDING PROTEIN 1|plasma-membrane associated cation-binding protein 1|microtubule-destabilizing protein 25|F1C12.180|F1C12_180|AtPCaP1 protein taxon:3702 20081011 TAIR TAIR:locus:2120402 @@ -316332,7 +316330,6 @@ TAIR locus:2076512 RPK2 PO:0009071 TAIR:Publication:501721442|PMID:17419837 IDA TAIR locus:2016600 AAP1 PO:0000027 TAIR:Publication:501721440|PMID:17419840 IDA S AT1G58360 AT1G58360|AAP1|NAT2|amino acid permease 1|NEUTRAL AMINO ACID TRANSPORTER 2 protein taxon:3702 20070621 TAIR TAIR:locus:2016600 TAIR locus:2176357 QQT1 PO:0000016 TAIR:Publication:501721439|PMID:17419841 IEP S AT5G22370 AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17 protein taxon:3702 20071113 TAIR TAIR:locus:2176357 TAIR locus:2176357 QQT1 PO:0000025 TAIR:Publication:501721439|PMID:17419841 IEP S AT5G22370 AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17 protein taxon:3702 20071113 TAIR TAIR:locus:2176357 -TAIR locus:2176357 QQT1 PO:0004706 TAIR:Publication:501721439|PMID:17419841 IEP S AT5G22370 AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17 protein taxon:3702 20071113 TAIR TAIR:locus:2176357 TAIR locus:2176357 QQT1 PO:0006085 TAIR:Publication:501721439|PMID:17419841 IEP S AT5G22370 AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17 protein taxon:3702 20071113 TAIR TAIR:locus:2176357 TAIR locus:2176357 QQT1 PO:0006203 TAIR:Publication:501721439|PMID:17419841 IEP S AT5G22370 AT5G22370|EMB1705|QQT1|EMBRYO DEFECTIVE 1705|QUATRE-QUART 1|MWD9.17|MWD9_17 protein taxon:3702 20071113 TAIR TAIR:locus:2176357 TAIR locus:2119093 QQT2 PO:0009005 TAIR:Publication:501721439|PMID:17419841 IEP S AT4G21800 AT4G21800|QQT2|quatre-quart2|F17L22.260|F17L22_260 protein taxon:3702 20071113 TAIR TAIR:locus:2119093 @@ -317581,7 +317578,6 @@ TAIR locus:2090734 ABCB19 PO:0020124 TAIR:Publication:501722560|PMID:17557807 I TAIR locus:2126881 JLO PO:0000019 TAIR:Publication:501722558|PMID:17557810 IDA S AT4G00220 AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4 protein taxon:3702 20071126 TAIR TAIR:locus:2126881 TAIR locus:2126881 JLO PO:0004704 TAIR:Publication:501722558|PMID:17557810 IDA S AT4G00220 AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4 protein taxon:3702 20071126 TAIR TAIR:locus:2126881 TAIR locus:2126881 JLO PO:0004705 TAIR:Publication:501722558|PMID:17557810 IDA S AT4G00220 AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4 protein taxon:3702 20071126 TAIR TAIR:locus:2126881 -TAIR locus:2126881 JLO PO:0004706 TAIR:Publication:501722558|PMID:17557810 IDA S AT4G00220 AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4 protein taxon:3702 20071126 TAIR TAIR:locus:2126881 TAIR locus:2126881 JLO PO:0020003 TAIR:Publication:501722558|PMID:17557810 IDA S AT4G00220 AT4G00220|LBD30|JLO|LOB DOMAIN-CONTAINING PROTEIN 30|JAGGED LATERAL ORGANS|F6N15.4|F6N15_4 protein taxon:3702 20071126 TAIR TAIR:locus:2126881 TAIR locus:2034163 AS2 PO:0000017 TAIR:Publication:501722551|PMID:17559509 IDA S AT1G65620 AT1G65620|AS2|ASYMMETRIC LEAVES 2|F5I14.15|F5I14_15 protein taxon:3702 20070912 TAIR TAIR:locus:2034163 TAIR locus:2034163 AS2 PO:0000025 TAIR:Publication:501722551|PMID:17559509 IEP S AT1G65620 AT1G65620|AS2|ASYMMETRIC LEAVES 2|F5I14.15|F5I14_15 protein taxon:3702 20070913 TAIR TAIR:locus:2034163 @@ -318882,7 +318878,6 @@ TAIR locus:2005494 ATH1 PO:0009025 TAIR:Publication:501723041|PMID:17908157 IEP TAIR locus:2005494 ATH1 PO:0020148 TAIR:Publication:501723041|PMID:17908157 IEP S AT4G32980 AT4G32980|ATH1|homeobox gene 1|F26P21.100|F26P21_100 protein taxon:3702 20071114 TAIR TAIR:locus:2005494 TAIR locus:2116752 ENP PO:0000001 TAIR:Publication:501724253|PMID:17913786 IDA S AT4G31820 AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702 20080407 TAIR TAIR:locus:2116752 TAIR locus:2116752 ENP PO:0000017 TAIR:Publication:501724253|PMID:17913786 IDA S AT4G31820 AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702 20080407 TAIR TAIR:locus:2116752 -TAIR locus:2116752 ENP PO:0004706 TAIR:Publication:501724253|PMID:17913786 IDA S AT4G31820 AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702 20080407 TAIR TAIR:locus:2116752 TAIR locus:2116752 ENP PO:0006210 TAIR:Publication:501724253|PMID:17913786 IDA S AT4G31820 AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702 20080407 TAIR TAIR:locus:2116752 TAIR locus:2116752 ENP PO:0020020 TAIR:Publication:501724253|PMID:17913786 IDA S AT4G31820 AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702 20080407 TAIR TAIR:locus:2116752 TAIR locus:2116752 ENP PO:0020021 TAIR:Publication:501724253|PMID:17913786 IDA S AT4G31820 AT4G31820|ENP|NPY1|MAB4|ENHANCER OF PINOID|NAKED PINS IN YUC MUTANTS 1|MACCHI-BOU 4|F11C18.20|F11C18_20 protein taxon:3702 20080407 TAIR TAIR:locus:2116752 @@ -319707,7 +319702,6 @@ TAIR locus:2172003 RHA1 PO:0009025 TAIR:Publication:501724632|PMID:18381353 IEP TAIR locus:2183906 CRN PO:0000230 TAIR:Publication:501724631|PMID:18381924 IDA S AT5G13290 AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702 20080829 TAIR TAIR:locus:2183906 TAIR locus:2183906 CRN PO:0004703 TAIR:Publication:501724631|PMID:18381924 IDA S AT5G13290 AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702 20080829 TAIR TAIR:locus:2183906 TAIR locus:2183906 CRN PO:0004705 TAIR:Publication:501724631|PMID:18381924 IDA S AT5G13290 AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702 20080829 TAIR TAIR:locus:2183906 -TAIR locus:2183906 CRN PO:0004706 TAIR:Publication:501724631|PMID:18381924 IDA S AT5G13290 AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702 20080829 TAIR TAIR:locus:2183906 TAIR locus:2183906 CRN PO:0008016 TAIR:Publication:501724631|PMID:18381924 IDA S AT5G13290 AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702 20080829 TAIR TAIR:locus:2183906 TAIR locus:2183906 CRN PO:0009009 TAIR:Publication:501724631|PMID:18381924 IDA S AT5G13290 AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702 20080829 TAIR TAIR:locus:2183906 TAIR locus:2183906 CRN PO:0009015 TAIR:Publication:501724631|PMID:18381924 IDA S AT5G13290 AT5G13290|SOL2|CRN|SUPPRESSOR OF LLP1 2|CORYNE|T31B5.110|T31B5_110|SOL2 protein taxon:3702 20080829 TAIR TAIR:locus:2183906 @@ -322597,7 +322591,6 @@ TAIR gene:1009022758 ATP1 PO:0009025 TAIR:Publication:501725189|PMID:18538804 I TAIR locus:2092180 RGS1 PO:0000293 TAIR:Publication:501725175|PMID:18541915 IEP S AT3G26090 AT3G26090|RGS1|ATRGS1|REGULATOR OF G-PROTEIN SIGNALING 1|MPE11.28 protein taxon:3702 20080808 TAIR TAIR:locus:2092180 TAIR locus:2094118 KRP6 PO:0000245 TAIR:Publication:501725143|PMID:18552199 IDA S AT3G19150 AT3G19150|KRP6|ICK4|ACK1|KIP-related protein 6|ARABIDOPSIS CDK INHIBITOR 1|MVI11.5|KIP-RELATED PROTEIN 6 protein taxon:3702 20080730 TAIR TAIR:locus:2094118 TAIR locus:2129525 RHF1A PO:0004705 TAIR:Publication:501725143|PMID:18552199 IDA S AT4G14220 AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146 protein taxon:3702 20080729 TAIR TAIR:locus:2129525 -TAIR locus:2129525 RHF1A PO:0004706 TAIR:Publication:501725143|PMID:18552199 IDA S AT4G14220 AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146 protein taxon:3702 20080729 TAIR TAIR:locus:2129525 TAIR locus:2094118 KRP6 PO:0006015 TAIR:Publication:501725143|PMID:18552199 IDA S AT3G19150 AT3G19150|KRP6|ICK4|ACK1|KIP-related protein 6|ARABIDOPSIS CDK INHIBITOR 1|MVI11.5|KIP-RELATED PROTEIN 6 protein taxon:3702 20080730 TAIR TAIR:locus:2094118 TAIR locus:2129525 RHF1A PO:0009029 TAIR:Publication:501725143|PMID:18552199 IDA S AT4G14220 AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146 protein taxon:3702 20080729 TAIR TAIR:locus:2129525 TAIR locus:2129525 RHF1A PO:0009030 TAIR:Publication:501725143|PMID:18552199 IDA S AT4G14220 AT4G14220|RHF1A|RING-H2 group F1A|DL3150W|FCAALL.146 protein taxon:3702 20080729 TAIR TAIR:locus:2129525 @@ -341231,7 +341224,6 @@ TAIR locus:2176402 RHS18 PO:0000256 TAIR:Publication:501730387|PMID:19448035 ID TAIR locus:2158227 RHS19 PO:0000256 TAIR:Publication:501730387|PMID:19448035 IDA S AT5G67400 AT5G67400|RHS19|root hair specific 19|K8K14.13|K8K14_13 protein taxon:3702 20090916 TAIR TAIR:locus:2158227 TAIR locus:2040292 BOP2 PO:0000229 TAIR:Publication:501730595|PMID:19482972 IDA S AT2G41370 AT2G41370|BOP2|BLADE ON PETIOLE2|F13H10.8|F13H10_8 protein taxon:3702 20110509 TAIR TAIR:locus:2040292 TAIR locus:2182993 PUCHI PO:0000229 TAIR:Publication:501730595|PMID:19482972 IDA S AT5G18560 AT5G18560|PUCHI|T28N17.40|T28N17_40 protein taxon:3702 20110509 TAIR TAIR:locus:2182993 -TAIR locus:2182993 PUCHI PO:0004706 TAIR:Publication:501730595|PMID:19482972 IDA S AT5G18560 AT5G18560|PUCHI|T28N17.40|T28N17_40 protein taxon:3702 20110509 TAIR TAIR:locus:2182993 TAIR locus:2119657 STP12 PO:0005027 TAIR:Publication:501730592|PMID:19487386 IEP S AT4G21480 AT4G21480|STP12|sugar transporter protein 12|F18E5.100|F18E5_100 protein taxon:3702 20090904 TAIR TAIR:locus:2119657 TAIR locus:2196583 ECB2 PO:0000003 TAIR:Publication:501730574|PMID:19500301 IEP S AT1G15510 AT1G15510|ATECB2|ECB2|VAC1|ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2|EARLY CHLOROPLAST BIOGENESIS2|VANILLA CREAM 1|T16N11.2|T16N11_2 protein taxon:3702 20101123 TAIR TAIR:locus:2196583 TAIR locus:2196583 ECB2 PO:0020030 TAIR:Publication:501730574|PMID:19500301 IEP S AT1G15510 AT1G15510|ATECB2|ECB2|VAC1|ARABIDOPSIS EARLY CHLOROPLAST BIOGENESIS2|EARLY CHLOROPLAST BIOGENESIS2|VANILLA CREAM 1|T16N11.2|T16N11_2 protein taxon:3702 20090910 TAIR TAIR:locus:2196583 @@ -342557,7 +342549,6 @@ TAIR locus:2202084 SUB PO:0006085 TAIR:Publication:501736395|PMID:20298225 IEP TAIR locus:2178002 PRE1 PO:0000013 TAIR:Publication:501736371|PMID:20305124 IDA S AT5G39860 AT5G39860|PRE1|BNQ1|BHLH136|PACLOBUTRAZOL RESISTANCE1|BANQUO 1|BASIC HELIX-LOOP-HELIX PROTEIN 136|MYH19.1|MYH19_1 protein taxon:3702 20100516 TAIR TAIR:locus:2178002 TAIR locus:2150916 BNQ2 PO:0004703 TAIR:Publication:501736371|PMID:20305124 IDA S AT5G15160 AT5G15160|BNQ2|BHLH134|BANQUO 2|BASIC HELIX-LOOP-HELIX PROTEIN 134|F8M21.50|F8M21_50 protein taxon:3702 20100516 TAIR TAIR:locus:2150916 TAIR locus:2150916 BNQ2 PO:0004705 TAIR:Publication:501736371|PMID:20305124 IDA S AT5G15160 AT5G15160|BNQ2|BHLH134|BANQUO 2|BASIC HELIX-LOOP-HELIX PROTEIN 134|F8M21.50|F8M21_50 protein taxon:3702 20100516 TAIR TAIR:locus:2150916 -TAIR locus:2100342 BNQ3 PO:0004706 TAIR:Publication:501736371|PMID:20305124 IDA S AT3G47710 AT3G47710|BNQ3|BHLH161|BANQUO 3|BASIC HELIX-LOOP-HELIX PROTEIN 161|T23J7.40 protein taxon:3702 20100516 TAIR TAIR:locus:2100342 TAIR locus:2100342 BNQ3 PO:0009030 TAIR:Publication:501736371|PMID:20305124 IDA S AT3G47710 AT3G47710|BNQ3|BHLH161|BANQUO 3|BASIC HELIX-LOOP-HELIX PROTEIN 161|T23J7.40 protein taxon:3702 20100516 TAIR TAIR:locus:2100342 TAIR locus:2100342 BNQ3 PO:0009031 TAIR:Publication:501736371|PMID:20305124 IDA S AT3G47710 AT3G47710|BNQ3|BHLH161|BANQUO 3|BASIC HELIX-LOOP-HELIX PROTEIN 161|T23J7.40 protein taxon:3702 20100516 TAIR TAIR:locus:2100342 TAIR locus:2178002 PRE1 PO:0009031 TAIR:Publication:501736371|PMID:20305124 IDA S AT5G39860 AT5G39860|PRE1|BNQ1|BHLH136|PACLOBUTRAZOL RESISTANCE1|BANQUO 1|BASIC HELIX-LOOP-HELIX PROTEIN 136|MYH19.1|MYH19_1 protein taxon:3702 20100516 TAIR TAIR:locus:2178002 @@ -344532,7 +344523,6 @@ TAIR locus:2156727 ADF10 PO:0025281 TAIR:Publication:501743260|PMID:21632657 IE TAIR locus:2163533 MOB1-like PO:0006204 TAIR:Publication:501743231|PMID:21641974 IDA S AT5G45550 AT5G45550|MOB1-like|MOB1-like|MFC19.22|MFC19_22 protein taxon:3702 20110715 TAIR TAIR:locus:2163533 TAIR locus:2041459 UBQ6 PO:0000003 TAIR:Publication:5618|PMID:2165066 IEP S AT2G47110 AT2G47110|UBQ6|UBI6|ubiquitin 6|UBIQUITIN EXTENSION PROTEIN 6|F14M4.6 protein taxon:3702 20030508 TAIR TAIR:locus:2041459 TAIR locus:2040332 WIH2 PO:0000017 TAIR:Publication:501743186|PMID:21658947 IEP S AT2G41420 AT2G41420|WIH2|WINDHOSE 2|F13H10.3|F13H10_3 protein taxon:3702 20110731 TAIR TAIR:locus:2040332 -TAIR locus:2158631 WIH1 PO:0004706 TAIR:Publication:501743186|PMID:21658947 IEP S AT5G67600 AT5G67600|WIH1|WINDHOSE 1|K9I9.17|K9I9_17 protein taxon:3702 20110731 TAIR TAIR:locus:2158631 TAIR locus:2158631 WIH1 PO:0006085 TAIR:Publication:501743186|PMID:21658947 IEP S AT5G67600 AT5G67600|WIH1|WINDHOSE 1|K9I9.17|K9I9_17 protein taxon:3702 20110731 TAIR TAIR:locus:2158631 TAIR locus:2158631 WIH1 PO:0020020 TAIR:Publication:501743186|PMID:21658947 IEP S AT5G67600 AT5G67600|WIH1|WINDHOSE 1|K9I9.17|K9I9_17 protein taxon:3702 20110731 TAIR TAIR:locus:2158631 TAIR locus:2040332 WIH2 PO:0020023 TAIR:Publication:501743186|PMID:21658947 IEP S AT2G41420 AT2G41420|WIH2|WINDHOSE 2|F13H10.3|F13H10_3 protein taxon:3702 20110731 TAIR TAIR:locus:2040332 diff --git a/po-associations/po_anatomy_gene_oryza_gramene.assoc b/po-associations/po_anatomy_gene_oryza_gramene.assoc index d05fbce..c898bc8 100644 --- a/po-associations/po_anatomy_gene_oryza_gramene.assoc +++ b/po-associations/po_anatomy_gene_oryza_gramene.assoc @@ -356,7 +356,6 @@ GR_gene GR:0080038 TAC1 PO:0004700 GR_ref:11269|PMID:16141453 IMP Q58GE3 A unde GR_gene GR:0080061 PROG1 PO:0004703 GR_ref:11367|PMID:15604733 IEP Q7XIM7 A YABBY1 OsYAB1 gene taxon:4530 20090923 GR GR_gene GR:0060106 C PO:0004705 GR_ref:11367|PMID:15604733 IEP Q7XIM7 A YABBY1 OsYAB1 gene taxon:4530 20090923 GR GR_gene GR:0060203 D23 PO:0004705 GR_ref:11425|PMID:15682279 IEP Q9XJ66 A MADS22 OsMADS22|STMADS11-like|RMD1 gene taxon:4530 20090923 GR -GR_gene GR:0060204 D24 PO:0004706 GR_ref:8170|PMID:14750524 IEP Q8GT95 A floral organ regulator 1 OsFOR1 gene taxon:4530 20090923 GR GR_gene GR:0060222 D57 PO:0004709 GR_ref:7848|PMID:12687001 IMP Q84MM9 A Monoculm 1 gene taxon:4530 20090923 GR GR_gene GR:0060289 EL PO:0004709 GR_ref:7850|PMID:12581309 IEP Q9ATR4 A TEOSINTE BRANCHED 1 OsTB1|Fine culm 1|fc1 gene taxon:4530 20090923 GR GR_gene GR:0060476 IPL3 PO:0004709 GR_ref:11422|PMID:17092317 IMP Q7XU29 A High-Tillering Dwarf1 OsCCD7 gene taxon:4530 20090923 GR -- 2.34.1