From e4460a8c59813797c43ee6d68b507162089e4572 Mon Sep 17 00:00:00 2001 From: elserj Date: Mon, 16 Feb 2015 22:36:46 +0000 Subject: [PATCH] Fix incorrect separator for T.cacao svn path=/; revision=607 --- interactome_scripts/find_species.pl | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/interactome_scripts/find_species.pl b/interactome_scripts/find_species.pl index b12de4e..9f8904f 100755 --- a/interactome_scripts/find_species.pl +++ b/interactome_scripts/find_species.pl @@ -576,7 +576,7 @@ sub find_gene { $transcript =~ s/transcript\://; $gene = $transcript; }elsif ($species eq "Theobroma_cacao") { - my ($gene_id,$transcript) = split(/\s/,$gene_header); + my ($gene_id,$transcript) = split(/\|/,$gene_header); $gene = $gene_id; }elsif ($species eq "Tolypocladium_inflatum") { $gene = $gene_header; @@ -855,7 +855,7 @@ sub find_gene_synonym { $peptide =~ s/\:pep//; $synonym = "$peptide,$gene_id"; }elsif ($species eq "Theobroma_cacao") { - my ($gene_id,$transcript) = split(/\s/,$gene_header); + my ($gene_id,$transcript) = split(/\|/,$gene_header); $synonym = $transcript; }elsif ($species eq "Trichodesmium_erythraeum") { my ($peptide,$temp,$chrom,$gene_id,$transcript,$gene_type,$transcript_type) = split(/\s/,$gene_header); -- 2.34.1