From 5f0c88232ab740cb70deabbde7a15f31fadaa1ae Mon Sep 17 00:00:00 2001 From: Laurel Cooper Date: Wed, 29 Oct 2025 13:30:49 -0600 Subject: [PATCH] Fixed one reference --- .../peco_gene_Oryza_Gramene.assoc | 248 +++++++++--------- 1 file changed, 124 insertions(+), 124 deletions(-) diff --git a/peco-associations/peco_gene_Oryza_Gramene.assoc b/peco-associations/peco_gene_Oryza_Gramene.assoc index 8f92d5c..8e3059c 100644 --- a/peco-associations/peco_gene_Oryza_Gramene.assoc +++ b/peco-associations/peco_gene_Oryza_Gramene.assoc @@ -408,8 +408,8 @@ GR_gene GR:0080002 FCA PECO:0007256 GR_REF:11175 IC E flowering time control p GR_gene GR:0080002 FCA PECO:0007266 GR_REF:11175 IC E flowering time control protein OsFCA|OsFCA-1|OsFCA-gamma|LOC_Os09g03610 gene taxon:4530 20121108 Gramene GR_gene GR:0080002 FCA PECO:0007269 GR_REF:11175 IC E flowering time control protein OsFCA|OsFCA-1|OsFCA-gamma|LOC_Os09g03610 gene taxon:4530 20121108 Gramene GR_gene GR:0080003 FY PECO:0007269 GR_REF:11174 IC E FY OsFY|putative FY protein|LOC_Os01g72220 gene taxon:4530 20121108 Gramene -GR_gene GR:0020144 bhlh4 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 4 basic helix loop helix 4|OsbHLH004|OsbHLH4|LOC_Os10g39750 gene taxon:4530 20121108 Gramene -GR_gene GR:0020144 bhlh4 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 4 basic helix loop helix 4|OsbHLH004|OsbHLH4|LOC_Os10g39750 gene taxon:4530 20121108 Gramene +GR_gene GR:0020144 bhlh4 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 4 basic helix loop helix 4|OsbHLH004|OsbHLH4|LOC_Os10g39750 gene taxon:4530 20121108 Gramene +GR_gene GR:0020144 bhlh4 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 4 basic helix loop helix 4|OsbHLH004|OsbHLH4|LOC_Os10g39750 gene taxon:4530 20121108 Gramene GR_gene GR:0080004 WRKY71 PECO:0007174 GR_REF:11288 IC E Transcription factor WRKY71 OsWRKY71|LOC_Os02g08440 gene taxon:4530 20121108 Gramene GR_gene GR:0080004 WRKY71 PECO:0007191 GR_REF:11288 IC E Transcription factor WRKY71 OsWRKY71|LOC_Os02g08440 gene taxon:4530 20121108 Gramene GR_gene GR:0080004 WRKY71 PECO:0007226 GR_REF:11288 IC E Transcription factor WRKY71 OsWRKY71|LOC_Os02g08440 gene taxon:4530 20121108 Gramene @@ -418,37 +418,37 @@ GR_gene GR:0080004 WRKY71 PECO:0007248 GR_REF:11288 IC E Transcription factor GR_gene GR:0080004 WRKY71 PECO:0007255 GR_REF:11288 IC E Transcription factor WRKY71 OsWRKY71|LOC_Os02g08440 gene taxon:4530 20121108 Gramene GR_gene GR:0080004 WRKY71 PECO:0007266 GR_REF:11288 IC E Transcription factor WRKY71 OsWRKY71|LOC_Os02g08440 gene taxon:4530 20121108 Gramene GR_gene GR:0080004 WRKY71 PECO:0007270 GR_REF:11288 IC E Transcription factor WRKY71 OsWRKY71|LOC_Os02g08440 gene taxon:4530 20121108 Gramene -GR_gene GR:0020145 tdr PECO:0007248 GR_REF:11280 IC E Tapetum degeneration retardation basic helix loop helix 5|OsbHLH005|OsbHLH5|basic/helix-loop-helix 5|bhlh5|LOC_Os02g02820 gene taxon:4530 20121108 Gramene -GR_gene GR:0020146 bhlh6 PECO:0007199 GR_REF:11280 IC E basic/helix-loop-helix 6 RERJ1|basic helix loop helix 6|OsbHLH006|OsbHLH6|LOC_Os04g23550 gene taxon:4530 20121108 Gramene -GR_gene GR:0020146 bhlh6 PECO:0007200 GR_REF:11280 IC E basic/helix-loop-helix 6 RERJ1|basic helix loop helix 6|OsbHLH006|OsbHLH6|LOC_Os04g23550 gene taxon:4530 20121108 Gramene -GR_gene GR:0020146 bhlh6 PECO:0007267 GR_REF:11280 IC E basic/helix-loop-helix 6 RERJ1|basic helix loop helix 6|OsbHLH006|OsbHLH6|LOC_Os04g23550 gene taxon:4530 20121108 Gramene -GR_gene GR:0020148 bhlh8 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 8 basic helix loop helix 8|OsbHLH008|OsbHLH8|LOC_Os01g13460 gene taxon:4530 20121108 Gramene -GR_gene GR:0020148 bhlh8 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 8 basic helix loop helix 8|OsbHLH008|OsbHLH8|LOC_Os01g13460 gene taxon:4530 20121108 Gramene -GR_gene GR:0020149 bhlh9 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 9 basic helix loop helix 9|OsbHLH009|OsbHLH9|MYC transcription factor|putative|LOC_Os10g42430 gene taxon:4530 20121108 Gramene -GR_gene GR:0020149 bhlh9 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 9 basic helix loop helix 9|OsbHLH009|OsbHLH9|MYC transcription factor|putative|LOC_Os10g42430 gene taxon:4530 20121108 Gramene -GR_gene GR:0020162 bhlh24 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 24 B1112D09.4 protein|basic helix loop helix 24|OsbHLH0024|OsbHLH24|LOC_Os01g39330 gene taxon:4530 20121108 Gramene -GR_gene GR:0020162 bhlh24 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 24 B1112D09.4 protein|basic helix loop helix 24|OsbHLH0024|OsbHLH24|LOC_Os01g39330 gene taxon:4530 20121108 Gramene -GR_gene GR:0020165 bhlh27 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 27 basic helix loop helix 27|OsbHLH0027|OsbHLH27|LOC_Os01g09900 gene taxon:4530 20121108 Gramene -GR_gene GR:0020169 bhlh31 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 31 P0605H02.26|basic helix loop helix 31|OsbHLH0031|OsbHLH31|LOC_Os08g38210 gene taxon:4530 20121108 Gramene -GR_gene GR:0020169 bhlh31 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 31 P0605H02.26|basic helix loop helix 31|OsbHLH0031|OsbHLH31|LOC_Os08g38210 gene taxon:4530 20121108 Gramene -GR_gene GR:0020170 bhlh32 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 32 OSJNBa0026C08.39-1|basic helix loop helix 32|OsbHLH0032|OsbHLH32|LOC_Os09g29930 gene taxon:4530 20121108 Gramene -GR_gene GR:0020170 bhlh32 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 32 OSJNBa0026C08.39-1|basic helix loop helix 32|OsbHLH0032|OsbHLH32|LOC_Os09g29930 gene taxon:4530 20121108 Gramene -GR_gene GR:0020170 bhlh32 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 32 OSJNBa0026C08.39-1|basic helix loop helix 32|OsbHLH0032|OsbHLH32|LOC_Os09g29930 gene taxon:4530 20121108 Gramene -GR_gene GR:0020171 bhlh33 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene -GR_gene GR:0020171 bhlh33 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene -GR_gene GR:0020171 bhlh33 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene -GR_gene GR:0020171 bhlh33 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene -GR_gene GR:0020171 bhlh33 PECO:0007270 GR_REF:11280 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene -GR_gene GR:0020171 bhlh33 PECO:0007373 GR_REF:11280 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene -GR_gene GR:0020172 bhlh34 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 34 BHLH protein-like|B1121A12.20|basic helix loop helix 34|OsbHLH034|OsbHLH34|LOC_Os02g49480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020173 bhlh35 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 35 basic helix loop helix 35|OsbHLH035|OsbHLH35|ESTs C26093|C11622|LOC_Os01g06640 gene taxon:4530 20121108 Gramene -GR_gene GR:0020173 bhlh35 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 35 basic helix loop helix 35|OsbHLH035|OsbHLH35|ESTs C26093|C11622|LOC_Os01g06640 gene taxon:4530 20121108 Gramene -GR_gene GR:0020177 bhlh39 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 39 DNA binding protein-like|OJ1294_G06.8|basic helix loop helix 39|OsbHLH039|OsbHLH39|LOC_Os09g24490 gene taxon:4530 20121108 Gramene -GR_gene GR:0020178 bhlh40 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 40 basic helix loop helix 40|OsbHLH040|OsbHLH40|LOC_Os03g15440 gene taxon:4530 20121108 Gramene -GR_gene GR:0020179 bhlh41 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 41 Putative DNA binding protein|OSJNBb0033J23.9|basic helix loop helix 41|OsbHLH041|OsbHLH41|LOC_Os03g59670 gene taxon:4530 20121108 Gramene -GR_gene GR:0020180 bhlh42 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 42 BHLH protein family-like|OJ1666_A04.16|basic helix loop helix 42|OsbHLH042|OsbHLH42|LOC_Os08g37290 gene taxon:4530 20121108 Gramene -GR_gene GR:0020182 bhlh44 PECO:0007256 GR_REF:11280 IC E basic/helix-loop-helix 44 OJ1217B09.8|Hypothetical protein|basic helix loop helix 44|OsbHLH044|OsbHLH44|LOC_Os03g08930 gene taxon:4530 20121108 Gramene -GR_gene GR:0020183 bhlh45 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 45 basic helix loop helix 43|OsbHLH043|OsbHLH43|LOC_Os10g23050 gene taxon:4530 20121108 Gramene +GR_gene GR:0020145 tdr PECO:0007248 DOI:10.1104/pp.106.080580 IC E Tapetum degeneration retardation basic helix loop helix 5|OsbHLH005|OsbHLH5|basic/helix-loop-helix 5|bhlh5|LOC_Os02g02820 gene taxon:4530 20121108 Gramene +GR_gene GR:0020146 bhlh6 PECO:0007199 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 6 RERJ1|basic helix loop helix 6|OsbHLH006|OsbHLH6|LOC_Os04g23550 gene taxon:4530 20121108 Gramene +GR_gene GR:0020146 bhlh6 PECO:0007200 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 6 RERJ1|basic helix loop helix 6|OsbHLH006|OsbHLH6|LOC_Os04g23550 gene taxon:4530 20121108 Gramene +GR_gene GR:0020146 bhlh6 PECO:0007267 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 6 RERJ1|basic helix loop helix 6|OsbHLH006|OsbHLH6|LOC_Os04g23550 gene taxon:4530 20121108 Gramene +GR_gene GR:0020148 bhlh8 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 8 basic helix loop helix 8|OsbHLH008|OsbHLH8|LOC_Os01g13460 gene taxon:4530 20121108 Gramene +GR_gene GR:0020148 bhlh8 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 8 basic helix loop helix 8|OsbHLH008|OsbHLH8|LOC_Os01g13460 gene taxon:4530 20121108 Gramene +GR_gene GR:0020149 bhlh9 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 9 basic helix loop helix 9|OsbHLH009|OsbHLH9|MYC transcription factor|putative|LOC_Os10g42430 gene taxon:4530 20121108 Gramene +GR_gene GR:0020149 bhlh9 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 9 basic helix loop helix 9|OsbHLH009|OsbHLH9|MYC transcription factor|putative|LOC_Os10g42430 gene taxon:4530 20121108 Gramene +GR_gene GR:0020162 bhlh24 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 24 B1112D09.4 protein|basic helix loop helix 24|OsbHLH0024|OsbHLH24|LOC_Os01g39330 gene taxon:4530 20121108 Gramene +GR_gene GR:0020162 bhlh24 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 24 B1112D09.4 protein|basic helix loop helix 24|OsbHLH0024|OsbHLH24|LOC_Os01g39330 gene taxon:4530 20121108 Gramene +GR_gene GR:0020165 bhlh27 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 27 basic helix loop helix 27|OsbHLH0027|OsbHLH27|LOC_Os01g09900 gene taxon:4530 20121108 Gramene +GR_gene GR:0020169 bhlh31 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 31 P0605H02.26|basic helix loop helix 31|OsbHLH0031|OsbHLH31|LOC_Os08g38210 gene taxon:4530 20121108 Gramene +GR_gene GR:0020169 bhlh31 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 31 P0605H02.26|basic helix loop helix 31|OsbHLH0031|OsbHLH31|LOC_Os08g38210 gene taxon:4530 20121108 Gramene +GR_gene GR:0020170 bhlh32 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 32 OSJNBa0026C08.39-1|basic helix loop helix 32|OsbHLH0032|OsbHLH32|LOC_Os09g29930 gene taxon:4530 20121108 Gramene +GR_gene GR:0020170 bhlh32 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 32 OSJNBa0026C08.39-1|basic helix loop helix 32|OsbHLH0032|OsbHLH32|LOC_Os09g29930 gene taxon:4530 20121108 Gramene +GR_gene GR:0020170 bhlh32 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 32 OSJNBa0026C08.39-1|basic helix loop helix 32|OsbHLH0032|OsbHLH32|LOC_Os09g29930 gene taxon:4530 20121108 Gramene +GR_gene GR:0020171 bhlh33 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene +GR_gene GR:0020171 bhlh33 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene +GR_gene GR:0020171 bhlh33 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene +GR_gene GR:0020171 bhlh33 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene +GR_gene GR:0020171 bhlh33 PECO:0007270 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene +GR_gene GR:0020171 bhlh33 PECO:0007373 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 33 P0039A07.22|Putative zinc finger protein|basic helix loop helix 33|OsbHLH033|OsbHLH33|LOC_Os01g65080 gene taxon:4530 20121108 Gramene +GR_gene GR:0020172 bhlh34 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 34 BHLH protein-like|B1121A12.20|basic helix loop helix 34|OsbHLH034|OsbHLH34|LOC_Os02g49480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020173 bhlh35 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 35 basic helix loop helix 35|OsbHLH035|OsbHLH35|ESTs C26093|C11622|LOC_Os01g06640 gene taxon:4530 20121108 Gramene +GR_gene GR:0020173 bhlh35 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 35 basic helix loop helix 35|OsbHLH035|OsbHLH35|ESTs C26093|C11622|LOC_Os01g06640 gene taxon:4530 20121108 Gramene +GR_gene GR:0020177 bhlh39 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 39 DNA binding protein-like|OJ1294_G06.8|basic helix loop helix 39|OsbHLH039|OsbHLH39|LOC_Os09g24490 gene taxon:4530 20121108 Gramene +GR_gene GR:0020178 bhlh40 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 40 basic helix loop helix 40|OsbHLH040|OsbHLH40|LOC_Os03g15440 gene taxon:4530 20121108 Gramene +GR_gene GR:0020179 bhlh41 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 41 Putative DNA binding protein|OSJNBb0033J23.9|basic helix loop helix 41|OsbHLH041|OsbHLH41|LOC_Os03g59670 gene taxon:4530 20121108 Gramene +GR_gene GR:0020180 bhlh42 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 42 BHLH protein family-like|OJ1666_A04.16|basic helix loop helix 42|OsbHLH042|OsbHLH42|LOC_Os08g37290 gene taxon:4530 20121108 Gramene +GR_gene GR:0020182 bhlh44 PECO:0007256 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 44 OJ1217B09.8|Hypothetical protein|basic helix loop helix 44|OsbHLH044|OsbHLH44|LOC_Os03g08930 gene taxon:4530 20121108 Gramene +GR_gene GR:0020183 bhlh45 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 45 basic helix loop helix 43|OsbHLH043|OsbHLH43|LOC_Os10g23050 gene taxon:4530 20121108 Gramene GR_gene GR:0080005 FOR1 PECO:0007048 GR_REF:8170 IC E floral organ regulator 1 OsFOR1|LOC_Os07g38130 gene taxon:4530 20121108 Gramene GR_gene GR:0080005 FOR1 PECO:0007174 GR_REF:8170 IC E floral organ regulator 1 OsFOR1|LOC_Os07g38130 gene taxon:4530 20121108 Gramene GR_gene GR:0080005 FOR1 PECO:0007226 GR_REF:8170 IC E floral organ regulator 1 OsFOR1|LOC_Os07g38130 gene taxon:4530 20121108 Gramene @@ -462,101 +462,101 @@ GR_gene GR:0080006 RTS PECO:0007269 GR_REF:11264 IC E rice tapetum-specific RT GR_gene GR:0080007 UDT1 PECO:0007248 GR_REF:11269 IC E undeveloped Tapetum1 Udt1|LOC_Os07g36460 gene taxon:4530 20121108 Gramene GR_gene GR:0080009 Lsi1 PECO:0007256 GR_REF:11101 IC E Low silicon rice 1 LOC_Os02g51110 gene taxon:4530 20121108 Gramene GR_gene GR:0080009 Lsi1 PECO:0007235 GR_REF:11101 IC E Low silicon rice 1 LOC_Os02g51110 gene taxon:4530 20121108 Gramene -GR_gene GR:0020194 bhlh56 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020194 bhlh56 PECO:0007254 GR_REF:11280 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020194 bhlh56 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020194 bhlh56 PECO:0007408 GR_REF:11280 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020194 bhlh56 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020194 bhlh56 PECO:0007254 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020194 bhlh56 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020194 bhlh56 PECO:0007408 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 56 P0431G06.12|basic helix loop helix 56|OsbHLH056|OsbHLH56|BHLH transcription factor-like|LOC_Os01g72370 gene taxon:4530 20121108 Gramene GR_gene GR:0020195 bhlh57 PECO:0007226 DOI:10.3390/ijms232314869 IC E basic/helix-loop-helix 57 basic helix loop helix 57|OsbHLH057|OsbHLH57|LOC_Os07g35870 gene taxon:4530 20121108 Gramene GR_gene GR:0020195 bhlh57 PECO:0007266 DOI:10.3390/ijms232314869 IC E basic/helix-loop-helix 57 basic helix loop helix 57|OsbHLH057|OsbHLH57|LOC_Os07g35870 gene taxon:4530 20121108 Gramene -GR_gene GR:0020196 bhlh58 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 58 basic helix loop helix 58|OsbHLH058|OsbHLH58|OJ1651_D06.8|LOC_Os05g38140 gene taxon:4530 20121108 Gramene +GR_gene GR:0020196 bhlh58 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 58 basic helix loop helix 58|OsbHLH058|OsbHLH58|OJ1651_D06.8|LOC_Os05g38140 gene taxon:4530 20121108 Gramene GR_gene GR:0800010 AID1 PECO:0007248 GR_REF:8303 IC E Anther Indehiscence1 OsAID1|LOC_Os06g08290 gene taxon:4530 20121108 Gramene -GR_gene GR:0020197 bhlh59 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020197 bhlh59 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020197 bhlh59 PECO:0007199 GR_REF:11280 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020197 bhlh59 PECO:0007200 GR_REF:11280 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020197 bhlh59 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020197 bhlh59 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020197 bhlh59 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020198 bhlh60 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 60 basic helix loop helix 60|OsbHLH060|OsbHLH60|OJ1119_D01.9|LOC_Os08g04390 gene taxon:4530 20121108 Gramene -GR_gene GR:0020198 bhlh60 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 60 basic helix loop helix 60|OsbHLH060|OsbHLH60|OJ1119_D01.9|LOC_Os08g04390 gene taxon:4530 20121108 Gramene -GR_gene GR:0020198 bhlh60 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 60 basic helix loop helix 60|OsbHLH060|OsbHLH60|OJ1119_D01.9|LOC_Os08g04390 gene taxon:4530 20121108 Gramene -GR_gene GR:0020199 bhlh61 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 61 basic helix loop helix 61|OsbHLH061|OsbHLH61|Helix-loop-helix DNA-binding domain containing protein|expressed|LOC_Os11g38870 gene taxon:4530 20121108 Gramene -GR_gene GR:0020199 bhlh61 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 61 basic helix loop helix 61|OsbHLH061|OsbHLH61|Helix-loop-helix DNA-binding domain containing protein|expressed|LOC_Os11g38870 gene taxon:4530 20121108 Gramene +GR_gene GR:0020197 bhlh59 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020197 bhlh59 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020197 bhlh59 PECO:0007199 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020197 bhlh59 PECO:0007200 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020197 bhlh59 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020197 bhlh59 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020197 bhlh59 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 59 basic helix loop helix 59|OsbHLH059|OsbHLH59|OJ1442_E05.19|LOC_Os02g02480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020198 bhlh60 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 60 basic helix loop helix 60|OsbHLH060|OsbHLH60|OJ1119_D01.9|LOC_Os08g04390 gene taxon:4530 20121108 Gramene +GR_gene GR:0020198 bhlh60 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 60 basic helix loop helix 60|OsbHLH060|OsbHLH60|OJ1119_D01.9|LOC_Os08g04390 gene taxon:4530 20121108 Gramene +GR_gene GR:0020198 bhlh60 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 60 basic helix loop helix 60|OsbHLH060|OsbHLH60|OJ1119_D01.9|LOC_Os08g04390 gene taxon:4530 20121108 Gramene +GR_gene GR:0020199 bhlh61 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 61 basic helix loop helix 61|OsbHLH061|OsbHLH61|Helix-loop-helix DNA-binding domain containing protein|expressed|LOC_Os11g38870 gene taxon:4530 20121108 Gramene +GR_gene GR:0020199 bhlh61 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 61 basic helix loop helix 61|OsbHLH061|OsbHLH61|Helix-loop-helix DNA-binding domain containing protein|expressed|LOC_Os11g38870 gene taxon:4530 20121108 Gramene GR_gene GR:0080011 nop PECO:0007248 GR_REF:11261 IC E no pollen Osnop|LOC_Os06g40570 gene taxon:4530 20121108 Gramene GR_gene GR:0080011 nop PECO:0007255 GR_REF:11261 IC E no pollen Osnop|LOC_Os06g40570 gene taxon:4530 20121108 Gramene GR_gene GR:0080011 nop PECO:0007383 GR_REF:11261 IC E no pollen Osnop|LOC_Os06g40570 gene taxon:4530 20121108 Gramene GR_gene GR:0020200 bhlh62 PECO:0007199 GR_REF:11820 IC E basic/helix-loop-helix 62 basic helix loop helix 62|OsbHLH062|OsbHLH62|Amelogenin-like protein|P0011H09.105|P0506F02.119|LOC_Os07g43530 gene taxon:4530 20121108 Gramene GR_gene GR:0020200 bhlh62 PECO:0007270 GR_REF:11820 IC E basic/helix-loop-helix 62 basic helix loop helix 62|OsbHLH062|OsbHLH62|Amelogenin-like protein|P0011H09.105|P0506F02.119|LOC_Os07g43530 gene taxon:4530 20121108 Gramene GR_gene GR:0080012 TB1 PECO:0007269 GR_REF:7850 IC E TEOSINTE BRANCHED 1 OsTB1|Fine culm 1|fc1|LOC_Os03g49880 gene taxon:4530 20121108 Gramene -GR_gene GR:0020201 bhlh63 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 63 basic helix loop helix 63|OsbHLH063|OsbHLH63|Putative amelogenin|OSJNBA0013O08.3|LOC_Os03g26210 gene taxon:4530 20121108 Gramene -GR_gene GR:0020202 bhlh64 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 64 basic helix loop helix 64|OsbHLH064|OsbHLH64|OSJNBa0065F08.2|Basic helix-loop-helix-like protein|LOC_Os02g23823 gene taxon:4530 20121108 Gramene -GR_gene GR:0020202 bhlh64 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 64 basic helix loop helix 64|OsbHLH064|OsbHLH64|OSJNBa0065F08.2|Basic helix-loop-helix-like protein|LOC_Os02g23823 gene taxon:4530 20121108 Gramene -GR_gene GR:0020203 bhlh65 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 65 basic helix loop helix 65|OsbHLH065|OsbHLH65|OJ990528_30.12|OJ990528_30.12 protein|OSJNBb0091E11.4 protein|LOC_Os04g41570 gene taxon:4530 20121108 Gramene -GR_gene GR:0020203 bhlh65 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 65 basic helix loop helix 65|OsbHLH065|OsbHLH65|OJ990528_30.12|OJ990528_30.12 protein|OSJNBb0091E11.4 protein|LOC_Os04g41570 gene taxon:4530 20121108 Gramene -GR_gene GR:0020203 bhlh65 PECO:0007270 GR_REF:11280 IC E basic/helix-loop-helix 65 basic helix loop helix 65|OsbHLH065|OsbHLH65|OJ990528_30.12|OJ990528_30.12 protein|OSJNBb0091E11.4 protein|LOC_Os04g41570 gene taxon:4530 20121108 Gramene +GR_gene GR:0020201 bhlh63 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 63 basic helix loop helix 63|OsbHLH063|OsbHLH63|Putative amelogenin|OSJNBA0013O08.3|LOC_Os03g26210 gene taxon:4530 20121108 Gramene +GR_gene GR:0020202 bhlh64 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 64 basic helix loop helix 64|OsbHLH064|OsbHLH64|OSJNBa0065F08.2|Basic helix-loop-helix-like protein|LOC_Os02g23823 gene taxon:4530 20121108 Gramene +GR_gene GR:0020202 bhlh64 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 64 basic helix loop helix 64|OsbHLH064|OsbHLH64|OSJNBa0065F08.2|Basic helix-loop-helix-like protein|LOC_Os02g23823 gene taxon:4530 20121108 Gramene +GR_gene GR:0020203 bhlh65 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 65 basic helix loop helix 65|OsbHLH065|OsbHLH65|OJ990528_30.12|OJ990528_30.12 protein|OSJNBb0091E11.4 protein|LOC_Os04g41570 gene taxon:4530 20121108 Gramene +GR_gene GR:0020203 bhlh65 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 65 basic helix loop helix 65|OsbHLH065|OsbHLH65|OJ990528_30.12|OJ990528_30.12 protein|OSJNBb0091E11.4 protein|LOC_Os04g41570 gene taxon:4530 20121108 Gramene +GR_gene GR:0020203 bhlh65 PECO:0007270 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 65 basic helix loop helix 65|OsbHLH065|OsbHLH65|OJ990528_30.12|OJ990528_30.12 protein|OSJNBb0091E11.4 protein|LOC_Os04g41570 gene taxon:4530 20121108 Gramene GR_gene GR:0080013 PNH1 PECO:0007174 GR_REF:6833 IC E PINHEAD1 OsPNH1|LOC_Os06g39640 gene taxon:4530 20121108 Gramene GR_gene GR:0080013 PNH1 PECO:0007226 GR_REF:6833 IC E PINHEAD1 OsPNH1|LOC_Os06g39640 gene taxon:4530 20121108 Gramene GR_gene GR:0080013 PNH1 PECO:0007248 GR_REF:6833 IC E PINHEAD1 OsPNH1|LOC_Os06g39640 gene taxon:4530 20121108 Gramene GR_gene GR:0080013 PNH1 PECO:0007256 GR_REF:6833 IC E PINHEAD1 OsPNH1|LOC_Os06g39640 gene taxon:4530 20121108 Gramene GR_gene GR:0080013 PNH1 PECO:0007266 GR_REF:6833 IC E PINHEAD1 OsPNH1|LOC_Os06g39640 gene taxon:4530 20121108 Gramene GR_gene GR:0080014 YAB1 PECO:0007255 GR_REF:11367 IC E YABBY1 OsYAB1|LOC_Os07g06620 gene taxon:4530 20121108 Gramene -GR_gene GR:0020207 bhlh68 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 68 basic helix loop helix 68|OsbHLH068|OsbHLH68|LOC_Os01g57580 gene taxon:4530 20121108 Gramene +GR_gene GR:0020207 bhlh68 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 68 basic helix loop helix 68|OsbHLH068|OsbHLH68|LOC_Os01g57580 gene taxon:4530 20121108 Gramene GR_gene GR:0020210 bhlh72 PECO:0007226 GR_REF:1182 IC E basic/helix-loop-helix 72 Ethylene-responsive family protein-like|OSJNBa0055M07.9|basic helix loop helix 72|OsbHLH072|OsbHLH72|LOC_Os02g17680 gene taxon:4530 20121108 Gramene -GR_gene GR:0020211 bhlh73 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 73 basic helix loop helix 73|OsbHLH073|OsbHLH73|Hypothetical protein P0499F10.3|LOC_Os05g14010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020211 bhlh73 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 73 basic helix loop helix 73|OsbHLH073|OsbHLH73|Hypothetical protein P0499F10.3|LOC_Os05g14010 gene taxon:4530 20121108 Gramene GR_gene GR:0080015 MADS1 PECO:0007255 GR_REF:1772 IC E MADS1 OsMADS1|lhs1|nsr|naked seed rice|leafy hull sterile 1|LOC_Os03g11614 gene taxon:4530 20121108 Gramene GR_gene GR:0080015 MADS1 PECO:0007266 GR_REF:1772 IC E MADS1 OsMADS1|lhs1|nsr|naked seed rice|leafy hull sterile 1|LOC_Os03g11614 gene taxon:4530 20121108 Gramene GR_gene GR:0080015 MADS1 PECO:0007248 GR_REF:1772 IC E MADS1 OsMADS1|lhs1|nsr|naked seed rice|leafy hull sterile 1|LOC_Os03g11614 gene taxon:4530 20121108 Gramene -GR_gene GR:0020217 bhlh79 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 79 basic helix loop helix 79|OsbHLH079|OsbHLH79|Putative bHLH transcription factor|P0680A05.9|LOC_Os02g47660 gene taxon:4530 20121108 Gramene -GR_gene GR:0020221 bhlh83 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 83 basic helix loop helix 83|OsbHLH083|OsbHLH83|Hypothetical protein P0668H12.5|P0668H12.5|LOC_Os05g01256 gene taxon:4530 20121108 Gramene -GR_gene GR:0020222 bhlh84 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 84 basic helix loop helix 84|OsbHLH084|OsbHLH84|OSJNBB0011H13.2|LOC_Os03g51910 gene taxon:4530 20121108 Gramene -GR_gene GR:0020222 bhlh84 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 84 basic helix loop helix 84|OsbHLH084|OsbHLH84|OSJNBB0011H13.2|LOC_Os03g51910 gene taxon:4530 20121108 Gramene -GR_gene GR:0020223 bhlh85 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 85 basic helix loop helix 85|OsbHLH085|OsbHLH85|TA1 protein-like|OSJNBa0026C08.22|LOC_Os09g29830 gene taxon:4530 20121108 Gramene -GR_gene GR:0020224 bhlh86 PECO:0007199 GR_REF:11280 IC E basic/helix-loop-helix 86 basic helix loop helix 86|OsbHLH086|OsbHLH86|P0038C05.31-|Putative TA1 protein|LOC_Os06g16400 gene taxon:4530 20121108 Gramene -GR_gene GR:0020224 bhlh86 PECO:0007200 GR_REF:11280 IC E basic/helix-loop-helix 86 basic helix loop helix 86|OsbHLH086|OsbHLH86|P0038C05.31-|Putative TA1 protein|LOC_Os06g16400 gene taxon:4530 20121108 Gramene -GR_gene GR:0020224 bhlh86 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 86 basic helix loop helix 86|OsbHLH086|OsbHLH86|P0038C05.31-|Putative TA1 protein|LOC_Os06g16400 gene taxon:4530 20121108 Gramene -GR_gene GR:0020226 bhlh88 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 88 basic helix loop helix 88|OsbHLH088|OsbHLH88|OJ1017C11.10|Hypothetical protein OJ1017C11.10|LOC_Os03g12940 gene taxon:4530 20121108 Gramene -GR_gene GR:0020226 bhlh88 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 88 basic helix loop helix 88|OsbHLH088|OsbHLH88|OJ1017C11.10|Hypothetical protein OJ1017C11.10|LOC_Os03g12940 gene taxon:4530 20121108 Gramene -GR_gene GR:0020228 bhlh90 PECO:0007200 GR_REF:11280 IC E basic/helix-loop-helix 90 basic helix loop helix 90|OsbHLH090|OsbHLH90|P0004D12.24|LOC_Os01g68700 gene taxon:4530 20121108 Gramene -GR_gene GR:0020228 bhlh90 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 90 basic helix loop helix 90|OsbHLH090|OsbHLH90|P0004D12.24|LOC_Os01g68700 gene taxon:4530 20121108 Gramene -GR_gene GR:0020229 bhlh91 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 91 basic helix loop helix 91|OsbHLH091|OsbHLH91|BHLH transcription factor(GBOF-1)-like|OJ1191_A10.7|LOC_Os08g41320 gene taxon:4530 20121108 Gramene -GR_gene GR:0020229 bhlh91 PECO:0007373 GR_REF:11280 IC E basic/helix-loop-helix 91 basic helix loop helix 91|OsbHLH091|OsbHLH91|BHLH transcription factor(GBOF-1)-like|OJ1191_A10.7|LOC_Os08g41320 gene taxon:4530 20121108 Gramene -GR_gene GR:0020229 bhlh91 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 91 basic helix loop helix 91|OsbHLH091|OsbHLH91|BHLH transcription factor(GBOF-1)-like|OJ1191_A10.7|LOC_Os08g41320 gene taxon:4530 20121108 Gramene -GR_gene GR:0020230 bhlh92 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene -GR_gene GR:0020230 bhlh92 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene -GR_gene GR:0020230 bhlh92 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene -GR_gene GR:0020230 bhlh92 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene -GR_gene GR:0020234 bhlh96 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020234 bhlh96 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020234 bhlh96 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020234 bhlh96 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020235 bhlh97 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 97 basic helix loop helix 97|OsbHLH097|OsbHLH97|P0020C11.18|Putative bHLH transcription factor PTF1|LOC_Os02g35660 gene taxon:4530 20121108 Gramene -GR_gene GR:0020236 bhlh98 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 98 basic helix loop helix 98|OsbHLH098|OsbHLH98|Hypothetical protein OSJNBa0094F01.11|OSJNBa0094F01.11|LOC_Os03g58330 gene taxon:4530 20121108 Gramene -GR_gene GR:0020236 bhlh98 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 98 basic helix loop helix 98|OsbHLH098|OsbHLH98|Hypothetical protein OSJNBa0094F01.11|OSJNBa0094F01.11|LOC_Os03g58330 gene taxon:4530 20121108 Gramene -GR_gene GR:0020237 bhlh99 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 99 basic helix loop helix 99|OsbHLH099|OsbHLH99|LOC_Os07g08440 gene taxon:4530 20121108 Gramene -GR_gene GR:0020240 bhlh102 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 102 basic helix loop helix 102|OsbHLH102|LOC_Os12g41650 gene taxon:4530 20121108 Gramene -GR_gene GR:0020242 bhlh104 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene -GR_gene GR:0020242 bhlh104 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene -GR_gene GR:0020242 bhlh104 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene -GR_gene GR:0020242 bhlh104 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene -GR_gene GR:0020243 bhlh105 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 105 basic helix loop helix 105|OsbHLH105|Putative BP-5 protein|P0498A12.33|LOC_Os01g18290 gene taxon:4530 20121108 Gramene -GR_gene GR:0020243 bhlh105 PECO:0007404 GR_REF:11280 IC E basic/helix-loop-helix 105 basic helix loop helix 105|OsbHLH105|Putative BP-5 protein|P0498A12.33|LOC_Os01g18290 gene taxon:4530 20121108 Gramene -GR_gene GR:0020245 bhlh107 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 107 basic helix loop helix 107|OsbHLH107|Putative SPATULA|OSJNBA0049O12.18|LOC_Os02g56140 gene taxon:4530 20121108 Gramene -GR_gene GR:0020246 bhlh108 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 108 basic helix loop helix 108|OsbHLH108|Basic helix-loop-helix protein SPATULA-like|OSJNBa0015I14.14|LOC_Os06g06900 gene taxon:4530 20121108 Gramene -GR_gene GR:0020246 bhlh108 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 108 basic helix loop helix 108|OsbHLH108|Basic helix-loop-helix protein SPATULA-like|OSJNBa0015I14.14|LOC_Os06g06900 gene taxon:4530 20121108 Gramene -GR_gene GR:0020247 bhlh109 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020247 bhlh109 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020247 bhlh109 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020247 bhlh109 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene -GR_gene GR:0020248 bhlh110 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 110 basic helix loop helix 110|OsbHLH110|Hypothetical protein OJ1669_F01.28|OJ1669_F01.28|LOC_Os02g39140 gene taxon:4530 20121108 Gramene -GR_gene GR:0020248 bhlh110 PECO:0007404 GR_REF:11280 IC E basic/helix-loop-helix 110 basic helix loop helix 110|OsbHLH110|Hypothetical protein OJ1669_F01.28|OJ1669_F01.28|LOC_Os02g39140 gene taxon:4530 20121108 Gramene -GR_gene GR:0020249 bhlh111 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 111 basic helix loop helix 111|OsbHLH111|OSJNBa0084K20.3 protein|OSJNBA0084K20.3|LOC_Os04g41229 gene taxon:4530 20121108 Gramene -GR_gene GR:0020249 bhlh111 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 111 basic helix loop helix 111|OsbHLH111|OSJNBa0084K20.3 protein|OSJNBA0084K20.3|LOC_Os04g41229 gene taxon:4530 20121108 Gramene -GR_gene GR:0020249 bhlh111 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 111 basic helix loop helix 111|OsbHLH111|OSJNBa0084K20.3 protein|OSJNBA0084K20.3|LOC_Os04g41229 gene taxon:4530 20121108 Gramene -GR_gene GR:0020250 bhlh112 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 112 basic helix loop helix 112|OsbHLH112|Transcription factor RAU1|RAU1|LOC_Os08g39630 gene taxon:4530 20121108 Gramene -GR_gene GR:0020251 bhlh113 PECO:0007048 GR_REF:11280 IC E basic/helix-loop-helix 113 basic helix loop helix 113|OsbHLH113|Putative DNA-binding protein|LOC_Os10g40740 gene taxon:4530 20121108 Gramene -GR_gene GR:0020251 bhlh113 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 113 basic helix loop helix 113|OsbHLH113|Putative DNA-binding protein|LOC_Os10g40740 gene taxon:4530 20121108 Gramene -GR_gene GR:0020257 bhlh119 PECO:0007404 GR_REF:11280 IC E basic/helix-loop-helix 119 basic helix loop helix 119|OsbHLH119|Hypothetical protein OJ1362_G11.11|OJ1362_G11.11|LOC_Os05g46370 gene taxon:4530 20121108 Gramene -GR_gene GR:0020258 bhlh120 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 120 basic helix loop helix 120|OsbHLH120|Basic helix-loop-helix (BHLH)-like protein|B1342C04.6|P0025H07.25|LOC_Os09g28210 gene taxon:4530 20121108 Gramene +GR_gene GR:0020217 bhlh79 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 79 basic helix loop helix 79|OsbHLH079|OsbHLH79|Putative bHLH transcription factor|P0680A05.9|LOC_Os02g47660 gene taxon:4530 20121108 Gramene +GR_gene GR:0020221 bhlh83 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 83 basic helix loop helix 83|OsbHLH083|OsbHLH83|Hypothetical protein P0668H12.5|P0668H12.5|LOC_Os05g01256 gene taxon:4530 20121108 Gramene +GR_gene GR:0020222 bhlh84 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 84 basic helix loop helix 84|OsbHLH084|OsbHLH84|OSJNBB0011H13.2|LOC_Os03g51910 gene taxon:4530 20121108 Gramene +GR_gene GR:0020222 bhlh84 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 84 basic helix loop helix 84|OsbHLH084|OsbHLH84|OSJNBB0011H13.2|LOC_Os03g51910 gene taxon:4530 20121108 Gramene +GR_gene GR:0020223 bhlh85 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 85 basic helix loop helix 85|OsbHLH085|OsbHLH85|TA1 protein-like|OSJNBa0026C08.22|LOC_Os09g29830 gene taxon:4530 20121108 Gramene +GR_gene GR:0020224 bhlh86 PECO:0007199 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 86 basic helix loop helix 86|OsbHLH086|OsbHLH86|P0038C05.31-|Putative TA1 protein|LOC_Os06g16400 gene taxon:4530 20121108 Gramene +GR_gene GR:0020224 bhlh86 PECO:0007200 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 86 basic helix loop helix 86|OsbHLH086|OsbHLH86|P0038C05.31-|Putative TA1 protein|LOC_Os06g16400 gene taxon:4530 20121108 Gramene +GR_gene GR:0020224 bhlh86 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 86 basic helix loop helix 86|OsbHLH086|OsbHLH86|P0038C05.31-|Putative TA1 protein|LOC_Os06g16400 gene taxon:4530 20121108 Gramene +GR_gene GR:0020226 bhlh88 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 88 basic helix loop helix 88|OsbHLH088|OsbHLH88|OJ1017C11.10|Hypothetical protein OJ1017C11.10|LOC_Os03g12940 gene taxon:4530 20121108 Gramene +GR_gene GR:0020226 bhlh88 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 88 basic helix loop helix 88|OsbHLH088|OsbHLH88|OJ1017C11.10|Hypothetical protein OJ1017C11.10|LOC_Os03g12940 gene taxon:4530 20121108 Gramene +GR_gene GR:0020228 bhlh90 PECO:0007200 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 90 basic helix loop helix 90|OsbHLH090|OsbHLH90|P0004D12.24|LOC_Os01g68700 gene taxon:4530 20121108 Gramene +GR_gene GR:0020228 bhlh90 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 90 basic helix loop helix 90|OsbHLH090|OsbHLH90|P0004D12.24|LOC_Os01g68700 gene taxon:4530 20121108 Gramene +GR_gene GR:0020229 bhlh91 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 91 basic helix loop helix 91|OsbHLH091|OsbHLH91|BHLH transcription factor(GBOF-1)-like|OJ1191_A10.7|LOC_Os08g41320 gene taxon:4530 20121108 Gramene +GR_gene GR:0020229 bhlh91 PECO:0007373 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 91 basic helix loop helix 91|OsbHLH091|OsbHLH91|BHLH transcription factor(GBOF-1)-like|OJ1191_A10.7|LOC_Os08g41320 gene taxon:4530 20121108 Gramene +GR_gene GR:0020229 bhlh91 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 91 basic helix loop helix 91|OsbHLH091|OsbHLH91|BHLH transcription factor(GBOF-1)-like|OJ1191_A10.7|LOC_Os08g41320 gene taxon:4530 20121108 Gramene +GR_gene GR:0020230 bhlh92 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene +GR_gene GR:0020230 bhlh92 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene +GR_gene GR:0020230 bhlh92 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene +GR_gene GR:0020230 bhlh92 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 92 basic helix loop helix 92|OsbHLH092|OsbHLH92|LOC_Os09g32510 gene taxon:4530 20121108 Gramene +GR_gene GR:0020234 bhlh96 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020234 bhlh96 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020234 bhlh96 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020234 bhlh96 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 96 Putative bHLH transcription factor PTF1|basic helix loop helix 96|OsbHLH096|OsbHLH96|P0698A06.26-2|LOC_Os06g09370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020235 bhlh97 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 97 basic helix loop helix 97|OsbHLH097|OsbHLH97|P0020C11.18|Putative bHLH transcription factor PTF1|LOC_Os02g35660 gene taxon:4530 20121108 Gramene +GR_gene GR:0020236 bhlh98 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 98 basic helix loop helix 98|OsbHLH098|OsbHLH98|Hypothetical protein OSJNBa0094F01.11|OSJNBa0094F01.11|LOC_Os03g58330 gene taxon:4530 20121108 Gramene +GR_gene GR:0020236 bhlh98 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 98 basic helix loop helix 98|OsbHLH098|OsbHLH98|Hypothetical protein OSJNBa0094F01.11|OSJNBa0094F01.11|LOC_Os03g58330 gene taxon:4530 20121108 Gramene +GR_gene GR:0020237 bhlh99 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 99 basic helix loop helix 99|OsbHLH099|OsbHLH99|LOC_Os07g08440 gene taxon:4530 20121108 Gramene +GR_gene GR:0020240 bhlh102 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 102 basic helix loop helix 102|OsbHLH102|LOC_Os12g41650 gene taxon:4530 20121108 Gramene +GR_gene GR:0020242 bhlh104 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020242 bhlh104 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020242 bhlh104 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020242 bhlh104 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 104 basic helix loop helix 104|OsbHLH104|OJ1343_B12.3|OJ1351_C05.28|LOC_Os07g05010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020243 bhlh105 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 105 basic helix loop helix 105|OsbHLH105|Putative BP-5 protein|P0498A12.33|LOC_Os01g18290 gene taxon:4530 20121108 Gramene +GR_gene GR:0020243 bhlh105 PECO:0007404 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 105 basic helix loop helix 105|OsbHLH105|Putative BP-5 protein|P0498A12.33|LOC_Os01g18290 gene taxon:4530 20121108 Gramene +GR_gene GR:0020245 bhlh107 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 107 basic helix loop helix 107|OsbHLH107|Putative SPATULA|OSJNBA0049O12.18|LOC_Os02g56140 gene taxon:4530 20121108 Gramene +GR_gene GR:0020246 bhlh108 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 108 basic helix loop helix 108|OsbHLH108|Basic helix-loop-helix protein SPATULA-like|OSJNBa0015I14.14|LOC_Os06g06900 gene taxon:4530 20121108 Gramene +GR_gene GR:0020246 bhlh108 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 108 basic helix loop helix 108|OsbHLH108|Basic helix-loop-helix protein SPATULA-like|OSJNBa0015I14.14|LOC_Os06g06900 gene taxon:4530 20121108 Gramene +GR_gene GR:0020247 bhlh109 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020247 bhlh109 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020247 bhlh109 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020247 bhlh109 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 109 basic helix loop helix 109|OsbHLH109|LOC_Os01g67480 gene taxon:4530 20121108 Gramene +GR_gene GR:0020248 bhlh110 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 110 basic helix loop helix 110|OsbHLH110|Hypothetical protein OJ1669_F01.28|OJ1669_F01.28|LOC_Os02g39140 gene taxon:4530 20121108 Gramene +GR_gene GR:0020248 bhlh110 PECO:0007404 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 110 basic helix loop helix 110|OsbHLH110|Hypothetical protein OJ1669_F01.28|OJ1669_F01.28|LOC_Os02g39140 gene taxon:4530 20121108 Gramene +GR_gene GR:0020249 bhlh111 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 111 basic helix loop helix 111|OsbHLH111|OSJNBa0084K20.3 protein|OSJNBA0084K20.3|LOC_Os04g41229 gene taxon:4530 20121108 Gramene +GR_gene GR:0020249 bhlh111 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 111 basic helix loop helix 111|OsbHLH111|OSJNBa0084K20.3 protein|OSJNBA0084K20.3|LOC_Os04g41229 gene taxon:4530 20121108 Gramene +GR_gene GR:0020249 bhlh111 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 111 basic helix loop helix 111|OsbHLH111|OSJNBa0084K20.3 protein|OSJNBA0084K20.3|LOC_Os04g41229 gene taxon:4530 20121108 Gramene +GR_gene GR:0020250 bhlh112 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 112 basic helix loop helix 112|OsbHLH112|Transcription factor RAU1|RAU1|LOC_Os08g39630 gene taxon:4530 20121108 Gramene +GR_gene GR:0020251 bhlh113 PECO:0007048 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 113 basic helix loop helix 113|OsbHLH113|Putative DNA-binding protein|LOC_Os10g40740 gene taxon:4530 20121108 Gramene +GR_gene GR:0020251 bhlh113 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 113 basic helix loop helix 113|OsbHLH113|Putative DNA-binding protein|LOC_Os10g40740 gene taxon:4530 20121108 Gramene +GR_gene GR:0020257 bhlh119 PECO:0007404 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 119 basic helix loop helix 119|OsbHLH119|Hypothetical protein OJ1362_G11.11|OJ1362_G11.11|LOC_Os05g46370 gene taxon:4530 20121108 Gramene +GR_gene GR:0020258 bhlh120 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 120 basic helix loop helix 120|OsbHLH120|Basic helix-loop-helix (BHLH)-like protein|B1342C04.6|P0025H07.25|LOC_Os09g28210 gene taxon:4530 20121108 Gramene GR_gene GR:0101171 Atg8 PECO:0007105 GR_REF:11433 IC E Autophagy 8 OsAtg8|LOC_Os07g32800 gene taxon:4530 20121108 Gramene GR_gene GR:0101171 Atg8 PECO:0007174 GR_REF:11433 IC E Autophagy 8 OsAtg8|LOC_Os07g32800 gene taxon:4530 20121108 Gramene GR_gene GR:0101171 Atg8 PECO:0007200 GR_REF:11433 IC E Autophagy 8 OsAtg8|LOC_Os07g32800 gene taxon:4530 20121108 Gramene @@ -636,22 +636,22 @@ GR_gene GR:0080023 SPY PECO:0007404 GR_REF:11382 IC E Spindly OsSPY|LOC_Os08g4 GR_gene GR:0101186 Zep1 PECO:0007048 GR_REF:41 IC E Zeaxanthin epoxidase 1 OsAba1|Aba2|OsAba2|OsZep1|Zep|OsZep|Aba1|LOC_Os04g37619 gene taxon:4530 20121108 Gramene GR_gene GR:0101186 Zep1 PECO:0007174 GR_REF:41 IC E Zeaxanthin epoxidase 1 OsAba1|Aba2|OsAba2|OsZep1|Zep|OsZep|Aba1|LOC_Os04g37619 gene taxon:4530 20121108 Gramene GR_gene GR:0101186 Zep1 PECO:0007226 GR_REF:41 IC E Zeaxanthin epoxidase 1 OsAba1|Aba2|OsAba2|OsZep1|Zep|OsZep|Aba1|LOC_Os04g37619 gene taxon:4530 20121108 Gramene -GR_gene GR:0020276 bhlh138 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 138 basic helix loop helix 138|OsbHLH138|OSJNBa0065F09.5|LOC_Os03g27390 gene taxon:4530 20121108 Gramene -GR_gene GR:0020276 bhlh138 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 138 basic helix loop helix 138|OsbHLH138|OSJNBa0065F09.5|LOC_Os03g27390 gene taxon:4530 20121108 Gramene -GR_gene GR:0020281 bhlh143 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 143 basic helix loop helix 143|OsbHLH143|LOC_Os09g31300 gene taxon:4530 20121108 Gramene -GR_gene GR:0020282 bhlh144 PECO:0007174 GR_REF:11280 IC E basic/helix-loop-helix 144 basic helix loop helix 144|OsbHLH144|LOC_Os04g35010 gene taxon:4530 20121108 Gramene -GR_gene GR:0020282 bhlh144 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 144 basic helix loop helix 144|OsbHLH144|LOC_Os04g35010 gene taxon:4530 20121108 Gramene -GR_gene GR:0020286 bhlh148 PECO:0007404 GR_REF:11280 IC E basic/helix-loop-helix 148 basic helix loop helix 148|OsbHLH148|Putative helix-loop-helix DNA-binding protein|OJ1365_D05.18|LOC_Os03g53020 gene taxon:4530 20121108 Gramene +GR_gene GR:0020276 bhlh138 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 138 basic helix loop helix 138|OsbHLH138|OSJNBa0065F09.5|LOC_Os03g27390 gene taxon:4530 20121108 Gramene +GR_gene GR:0020276 bhlh138 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 138 basic helix loop helix 138|OsbHLH138|OSJNBa0065F09.5|LOC_Os03g27390 gene taxon:4530 20121108 Gramene +GR_gene GR:0020281 bhlh143 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 143 basic helix loop helix 143|OsbHLH143|LOC_Os09g31300 gene taxon:4530 20121108 Gramene +GR_gene GR:0020282 bhlh144 PECO:0007174 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 144 basic helix loop helix 144|OsbHLH144|LOC_Os04g35010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020282 bhlh144 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 144 basic helix loop helix 144|OsbHLH144|LOC_Os04g35010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020286 bhlh148 PECO:0007404 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 148 basic helix loop helix 148|OsbHLH148|Putative helix-loop-helix DNA-binding protein|OJ1365_D05.18|LOC_Os03g53020 gene taxon:4530 20121108 Gramene GR_gene GR:0080025 MADS18 PECO:0007248 DOI:10.1104/pp.104.045039 IC E MADS box gene 18 OsMADS18|OsMADS2|FDRMADS7|OsMADS28|LOC_Os07g41370 gene taxon:4530 20121108 Gramene|PECO:cooperl -GR_gene GR:0020287 bhlh149 PECO:0007105 GR_REF:11280 IC E basic/helix-loop-helix 149 basic helix loop helix 149|OsbHLH149|P0505D12.13|LOC_Os01g64560 gene taxon:4530 20121108 Gramene -GR_gene GR:0020287 bhlh149 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 149 basic helix loop helix 149|OsbHLH149|P0505D12.13|LOC_Os01g64560 gene taxon:4530 20121108 Gramene -GR_gene GR:0020288 bhlh150 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 150 basic helix loop helix 150|OsbHLH150|LOC_Os12g06330 gene taxon:4530 20121108 Gramene -GR_gene GR:0020289 bhlh151 PECO:0007226 GR_REF:11280 IC E basic helix loop helix 151, OsbHLH151 basic helix loop helix 151|OsbHLH151|LOC_Os11g06010 gene taxon:4530 20121108 Gramene -GR_gene GR:0020290 bhlh152 PECO:0007226 GR_REF:11280 IC E basic/helix-loop-helix 152 basic helix loop helix 152|OsbHLH152|LOC_Os03g56950 gene taxon:4530 20121108 Gramene -GR_gene GR:0020293 bhlh155 PECO:0007266 GR_REF:11280 IC E basic/helix-loop-helix 155 basic helix loop helix 155|OsbHLH155|Hypothetical protein P0548E04.5|P0535F09.38|P0548E04.5|LOC_Os06g50900 gene taxon:4530 20121108 Gramene -GR_gene GR:0020298 bhlh160 PECO:0007199 GR_REF:11280 IC E basic/helix-loop-helix 160 basic helix loop helix 160|OsbHLH160|LOC_Os11g02054 gene taxon:4530 20121108 Gramene -GR_gene GR:0020298 bhlh160 PECO:0007200 GR_REF:11280 IC E basic/helix-loop-helix 160 basic helix loop helix 160|OsbHLH160|LOC_Os11g02054 gene taxon:4530 20121108 Gramene -GR_gene GR:0020298 bhlh160 PECO:0007383 GR_REF:11280 IC E basic/helix-loop-helix 160 basic helix loop helix 160|OsbHLH160|LOC_Os11g02054 gene taxon:4530 20121108 Gramene +GR_gene GR:0020287 bhlh149 PECO:0007105 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 149 basic helix loop helix 149|OsbHLH149|P0505D12.13|LOC_Os01g64560 gene taxon:4530 20121108 Gramene +GR_gene GR:0020287 bhlh149 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 149 basic helix loop helix 149|OsbHLH149|P0505D12.13|LOC_Os01g64560 gene taxon:4530 20121108 Gramene +GR_gene GR:0020288 bhlh150 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 150 basic helix loop helix 150|OsbHLH150|LOC_Os12g06330 gene taxon:4530 20121108 Gramene +GR_gene GR:0020289 bhlh151 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic helix loop helix 151, OsbHLH151 basic helix loop helix 151|OsbHLH151|LOC_Os11g06010 gene taxon:4530 20121108 Gramene +GR_gene GR:0020290 bhlh152 PECO:0007226 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 152 basic helix loop helix 152|OsbHLH152|LOC_Os03g56950 gene taxon:4530 20121108 Gramene +GR_gene GR:0020293 bhlh155 PECO:0007266 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 155 basic helix loop helix 155|OsbHLH155|Hypothetical protein P0548E04.5|P0535F09.38|P0548E04.5|LOC_Os06g50900 gene taxon:4530 20121108 Gramene +GR_gene GR:0020298 bhlh160 PECO:0007199 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 160 basic helix loop helix 160|OsbHLH160|LOC_Os11g02054 gene taxon:4530 20121108 Gramene +GR_gene GR:0020298 bhlh160 PECO:0007200 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 160 basic helix loop helix 160|OsbHLH160|LOC_Os11g02054 gene taxon:4530 20121108 Gramene +GR_gene GR:0020298 bhlh160 PECO:0007383 DOI:10.1104/pp.106.080580 IC E basic/helix-loop-helix 160 basic helix loop helix 160|OsbHLH160|LOC_Os11g02054 gene taxon:4530 20121108 Gramene GR_gene GR:0080026 RAD PECO:0007248 DOI:10.1093/pcp/pci090 IC E RAD OsRAD|OsGEN-L|OsGEN-like|LOC_Os09g35000 gene taxon:4530 20121108 Gramene|PECO:cooperl GR_gene GR:0080026 RAD PECO:0007383 DOI:10.1093/pcp/pci090 IC E RAD OsRAD|OsGEN-L|OsGEN-like|LOC_Os09g35000 gene taxon:4530 20121108 Gramene|PECO:cooperl GR_gene GR:0080027 HTD1 PECO:0007074 GR_REF:11422 IC E High-Tillering Dwarf1 OsCCD7|LOC_Os04g46470 gene taxon:4530 20121108 Gramene -- 2.34.1