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old-jaiswallab-svn/.git
2011-11-02 rajardeleted
2011-11-02 rajarCOMMAND TO RUN PREDOTAR
2011-11-02 rajarScript to run TMHMM application
2011-11-02 rajarScript to run TARGETP Aplication
2011-11-02 rajarsvn path=/; revision=205
2011-11-02 rajarScript to run TMHMM Application
2011-11-02 rajarFile removed
2011-11-02 rajarScript to run Targetp application
2011-11-01 rajarScript to run TMMHMM
2011-10-26 preecejCleanup...
2011-10-26 preecejCleanup...
2011-10-26 preecejCleanup time...
2011-10-25 lingutlntest
2011-10-25 elserjrestructuring of the jaiswal lab svn repo
2011-10-25 foxsatest file added 13:24
2011-10-25 foxsatest file added
2011-10-25 foxsasvn path=/; revision=193
2011-10-25 foxsasvn path=/; revision=192
2011-10-25 foxsamodified by sam fox
2011-10-19 preecejMod'd the heat map "temperature" to apply evenly to...
2011-10-18 preecejupdate doc
2011-10-18 preecejHeat map feature complete.
2011-10-17 preecejMore gradient heat map progress...
2011-10-17 preecejAdding gradient heat-map feature. In progress...
2011-10-15 preecejCompleted gene symbol feature; working on heat map...
2011-10-14 preecejminor adjustments to maize script; in progress: adding...
2011-10-05 preecejAdded maize classical gene name and symbol mapping...
2011-09-24 elserjAdded potato
2011-09-14 rajarinitial import of Rajani's repo
2011-09-08 preecejfixed non-PMID: ref pub strip at line 291
2011-09-07 preecejpaw_...: backed out the max file size option
2011-09-07 preecejUpdated test.TermSearch_JSON.php to use Test env vars
2011-09-07 preecejMaking this file env-specific
2011-09-07 preecejPublication adjustments
2011-09-03 preecejTweaked for oryza (refined multi-species handling)
2011-09-02 preecejAdded Reference Publication page generation; modified...
2011-09-02 preecejAdded provenance for Gene Synonyms, Ontologies
2011-08-27 preecejAdded more Evidence Code and Evidence functionality...
2011-08-26 preecejAdded GO web services in TermSearch_JSON. More XML...
2011-08-25 preecejIn progress; Revised ontology info, ontology references...
2011-08-24 preecejIn progress; added handling for grouped ont term ids...
2011-08-22 preecejChanged Has_Evidence_Code to array; now allows multiple...
2011-08-22 preecejwhoops, don't want this one in there
2011-08-22 preecejMoved wiki config files and pruned all old versions...
2011-08-22 preecejholds proper db connex string for command-line PHP...
2011-08-17 preecejIncludes indirect listing of db conection info
2011-08-17 preecejupdates related to moving db connection strings to...
2011-08-17 preecejUpdated web service URLs
2011-08-17 preecejList of species used to drive data in an autocompletion...
2011-08-17 preecejUpdated web service URLs
2011-08-17 preecejOfficial development copies of internal web services...
2011-08-17 preecejsvn path=/; revision=158
2011-08-17 preecejVersion of semantic_wiki/prototyping/TermSearch_JSON...
2011-08-17 preecejremoved Gene Synonym Pair SIO and related properties
2011-08-15 preecejAdded comments for future version of script; added...
2011-08-12 preecejAdded ability to map to multiple original gene boxes...
2011-08-12 preecejadded commentary
2011-08-12 preecejperldoc edits
2011-08-12 preecejChanged refs from "paralog" to "homolog"; edited perldoc
2011-08-11 preecejAdded options, set config defaults, hardened the code
2011-08-11 preecejAdded creation of new groups when needed.
2011-08-10 preecejAdded multiple paralog gene box illustration, coloring...
2011-08-10 preecejAdded more node attribute changes
2011-08-10 preecejadded TODOs
2011-08-10 preecejBegan modifying DataNodes for 1-to-1: added label prefi...
2011-08-09 preecejTesting...
2011-08-09 preecejAdded GPML hex id hash, nodes_by_gene_id hash, and...
2011-08-08 preecejRemoves pubs and pub refs from doc.
2011-08-05 preecejAdded MH's gene counting code, changed gene hash tp...
2011-08-05 preecejSeparated locus and accession id vars; made each more...
2011-08-03 preecejSet seed values for fresh import.
2011-08-03 preecejJust keeping the wiki code current
2011-08-03 preecejadded folder to hold "static" wiki content pages, such...
2011-08-01 preecejAdded GPML read-in, STDOUT/file out/manipulation tests.
2011-07-30 preecejAdds simple read-in of csv gene-swapping file
2011-07-29 preecejUpdated just before migration to Test.
2011-07-29 preecejAdded before migrating to Test.
2011-07-29 preecejAdded the planteome skin, built from the vector skin
2011-07-29 preecejLatest version of paw forms, just before migration...
2011-07-29 preecejCompleted GAF import transformation script for scale...
2011-07-29 preecejBegan XML doc write using XML::Writer
2011-07-28 preecejAdded commentary amd config file read-in
2011-07-28 preecejIncludes Mamatha's first updates to opt args
2011-07-28 preecejCompleted data read-in of GAF file (paw_TransformForImp...
2011-07-26 preecejNew script for directly modifying PathVisio GPML files...
2011-07-25 preecejBegan breaking out GAF from generic CSV, tab format.
2011-07-23 preecejStarted adding GAF format input option to Rev 0.2
2011-07-19 preecejMinor query updates to better handle obsolete terms
2011-07-15 preecejAdded a max return count of 50, filtered out OBSOLETE...
2011-07-15 preecejModified queries to provide more fields from the AmiGO db.
2011-07-13 preecejnew RESTful web service for the PO site and for the...
2011-07-09 elserjUpdate for new fasta files
2011-07-08 preecejStashing local copies of LocalSettings.php for safekeeping
2011-07-06 elserjworks now, at least for Spanish
2011-07-06 elserjMoved to DbiFloret::dbconnect for db connection, and...
2011-07-06 elserjAdded new species
2011-07-06 elserjSwitch to using dbconnect method from DbiFloret module
2011-07-06 elserjFixed so that backspace works
2011-07-06 preecejxml file-generation debug
2011-07-06 preecejChanged name of import file from PS_* to paw_*
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