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associations/.git
2015-12-30 meieraupdated new annotation files, added them to the concate...
2015-12-30 elserjRemove unnecessary tabs from last column
2015-12-30 elserjFix loding errors in AmiGO2
2015-12-30 elserjRemove extra columns from header
2015-12-30 elserjAdd "taxon:" to taxon column
2015-12-30 elserjRemove gaf-version tag from header, file isn't actually 2.0
2015-12-30 elserjChange Physcomitrella taxon id to one that works
2015-12-30 elserjMessed up adding the "taxon:", it shouldn't have been...
2015-12-30 elserjRemoved extra column 18, added gaf-version header and...
2015-12-30 elserjAdded gaf-version header line to make warnings go away...
2015-12-30 meieraRemoved individual annotation files, replaced them...
2015-12-29 cooperlRemoved lines in TO_IMP_gene_O.sativa.assoc and saved...
2015-12-29 cooperlAdding cassava data files for reference
2015-12-29 cooperlAdding cassava germaplsm annotations from Genesys
2015-12-29 cooperlFixed file names for TO_PPPP files
2015-12-29 cooperlchanged aspect to T from branch identifiers in PPPP...
2015-12-29 cooperlAdded a couple missing TO annotations.
2015-12-28 meieraadded test files to test column 9 (Aspect). Added...
2015-12-28 meieraAdded blast annotation file back
2015-12-28 meieraremoved blast annotation file testing the use of column8.
2015-12-17 cooperlAdding test folder for cassava annotations
2015-12-17 meierachanged from_country annotation to column 8, and left...
2015-12-14 meieraRemoved '\n' from protein_trait_annotation.tsv
2015-12-14 meieraFixed line errors in files. Testing column 8 in blast2...
2015-12-12 meieraFiles should no longer be empty!!!
2015-12-11 meierathis time I actually added the gaf files.
2015-12-11 meieraRemoved old test_rice_blast_annotation.tsv, and replace...
2015-11-25 meieraAdded a test_germplasm folder to store test annotation...
2015-11-13 elserjReplace GR_tax ids with corresponding NCBI ones
2015-10-14 elserjRemove all .txt files as they have been superceded...
2015-10-09 elserjUpdated zip file to have all association files in relea...
2015-10-05 elserjReplace references to "Ethan Johnson" and "Brian_Atkins...
2015-10-05 elserjChange association to alt_id PO:0007617 to PO:0007616...
2015-10-05 elserjRevert back to non-empty revision. Automatic commit...
2015-10-03 elserjFix typo: GRR should have been GR
2015-10-01 meierachanged line 1476 in po_anatomy_stock_arabidopsis_nasc...
2015-09-29 elserjRemove space in column 16
2015-09-29 elserjFix missing end parantheses in column 16. Was causing...
2015-09-29 elserjFix extra pipe symbols in column 16 that were causing...
2015-09-29 elserjFix missing parantheses in column 16 on some lines
2015-09-28 meierarevised line 441 to fix issue with blank col_7
2015-09-28 elserjRemoved 2 blank lines
2015-09-25 meierachanged names of PO_* to be lowercase po_*. keeps the...
2015-09-25 meieraremoved 11 exact duplicate rows from PO_growth_gene_mod...
2015-09-25 elserjMove soy qtl file out of testing
2015-09-25 cooperlRemoving empty test folders
2015-09-25 cooperlRemoving empty test folder
2015-09-25 meieraDuplicate removal of maize association files using...
2015-09-25 cooperlAdded eight lines that were in the PO file and referred...
2015-09-25 cooperlRemoved lines referring to PO:0020008, which is the...
2015-09-25 elserjMove files out of test_leaf_dev and test_PPPP_PO folder...
2015-09-25 meierapo_anatomy_gene_zea_MaizeGDB.assoc file was loaded...
2015-09-18 elserjChanged column 8 to have MaizeGDB: in the from part...
2015-09-18 elserjFix taxon id column to use NCBI ids rather than gramene...
2015-09-16 meierarevised the po_anatomy_stock_zea_MaizeGDB.assoc to...
2015-09-16 meierarevised column 1 of po_anatomy_stock_zea_MaizeGDB.assoc...
2015-09-12 meieraRemoved duplicate lines from TO_ontology_IMP_gene_Z...
2015-09-12 meieraRemoved duplicate lines from TO_ontology_IMP_gene_M...
2015-09-12 meieraremoved duplicate lines from GO_ontology_IMP_gene_M...
2015-09-12 meieraRemoved duplicated lines from GO_ontology_IMP_gene_S...
2015-09-11 meieraremoved duplicated lines from GO_ontology_IMP_gene_O...
2015-09-11 cooperlRemoved test_phenos folder and the go_gene_oryza_phenos...
2015-09-11 meierarenamed all the association files in the Test_PPPP_TO...
2015-09-11 meieraRenamed all association files in Test_PPPP_GO to be...
2015-09-11 cooperlrenamed the test-maizegdb-2015 folder to test-maizegdb
2015-09-11 cooperlRenamed test folder PO association files from test_PPPP...
2015-09-11 elserjChanged Test_GO folder to Test_PPPP_GO
2015-09-11 elserjChanged Test_TO folder to Test_PPPP_TO
2015-09-10 johnsethadded TEST_TO folder containing .assoc files for maize...
2015-09-10 johnsethadded TEST_GO file containing .assoc files for Maize...
2015-08-28 meieraAdded go-association/ directory, and moved all go-assoc...
2015-08-28 meieracreated to-associations/ folder, and moved all to.assoc...
2015-08-28 meieraAdded an eo-association folder to the associations...
2015-08-27 cooperlAdding test folder for new MaizeGDB association files
2015-08-26 meierachanged the + to a space in plant_ontology_qtl_glycine_...
2015-08-26 meierareplaced all spaces with '+' so they would work as...
2015-08-26 meieraModified the second column of the plant_ontology_qtl_gl...
2015-08-21 johnsethremoved PO_ontology_IMP_gene_oryza.assoc
2015-08-21 johnsethrenamed test_PPPP/PO_ontology_IMP_gene_G.max.assoc...
2015-08-21 johnsethadded pubmed IDs to
2015-08-21 meieraFixed a typo in the taxonID column of PO_ontology_IMP_g...
2015-08-21 meieraUpdated the Taxon column to add "taxon:" before the...
2015-08-21 johnsethrevised column 13, added "taxon" before actual id for...
2015-08-21 meieraAdded leading zeros back to Database ID column.
2015-08-21 elserjRemove empty lines from end of file
2015-08-21 johnsethrevised the PO_anatomy_IMP_gene_arabidopsis.assoc
2015-08-20 johnsethrevised column 1 of PO_ontology_IMP_gene_soybean.assoc
2015-08-20 johnsethrevised column 1 of PO_ontology_IMP_gene_soybean.assoc
2015-08-19 johnsethmade revisions to column 4 and last rows of the test_PP...
2015-08-19 meieracorrected errors in test_PPPP/PO_anatomy_IMP_gene_arabi...
2015-08-19 meierarevised database column in /PO_ontology_IMP_gene_soybea...
2015-08-19 meieraremoved headers from /PO_anatomy_IMP_gene_arabidopsis...
2015-08-19 meieraadded directory test_PPPP containing /PO_anatomy_IMP_ge...
2015-07-27 elserjFixed some more spacing problems.
2015-07-27 elserjFixed extra spaces in PO id column. Needed for AmiGO2...
2015-06-26 elserjFixed spacing issues in file. Can't have spaces betwee...
2015-06-25 tairUndoing commit of bad data merge
2015-06-25 tairTAIR monthly commit
2015-04-21 elserjFixed spacing issues in assoc files. Most were in...
2014-08-02 tairTAIR weekly commit
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