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old-jaiswallab-svn/.git
2011-05-24 preecejAdded initial copy of DataTransfer extension, with... commit | commitdiff | tree | snapshot
2011-05-23 preecejsvn path=/; revision=98 commit | commitdiff | tree | snapshot
2011-05-23 preecejsvn path=/; revision=97 commit | commitdiff | tree | snapshot
2011-05-23 preecejsvn path=/; revision=96 commit | commitdiff | tree | snapshot
2011-05-23 preecejsvn path=/; revision=95 commit | commitdiff | tree | snapshot
2011-05-23 preecejRefreshed versions of LocalSettings.php and NCBI_eDocSu... commit | commitdiff | tree | snapshot
2011-05-04 elserjAdd check for .txt assoc files commit | commitdiff | tree | snapshot
2011-05-04 elserjAdd file to create a fasta protein file from a list... commit | commitdiff | tree | snapshot
2011-04-19 preecejAdded step-interaction data type and format converter... commit | commitdiff | tree | snapshot
2011-04-06 elserjChanged Zea mays to use the header from maizesequence.org commit | commitdiff | tree | snapshot
2011-03-10 elserjAdded script that will take the list of protein coding... commit | commitdiff | tree | snapshot
2011-02-14 preecejFirst iteration: Determine mapped ChEBI molecules liste... commit | commitdiff | tree | snapshot
2011-02-09 preecejtemp script for correcting a curatorial data problem... commit | commitdiff | tree | snapshot
2011-02-07 preecejremoved rice references to make generic for other species commit | commitdiff | tree | snapshot
2011-01-28 elserjAdd species commit | commitdiff | tree | snapshot
2011-01-28 elserjAdd citrus, eucalyptus and apple to gene detection commit | commitdiff | tree | snapshot
2011-01-08 elserjexpanded to .fa as well as .fasta files. Also, seperat... commit | commitdiff | tree | snapshot
2011-01-08 elserjScript to be used for detection of obsolete terms in... commit | commitdiff | tree | snapshot
2010-10-29 elserjScript to find some stats about a species supercluster... commit | commitdiff | tree | snapshot
2010-10-27 preecejmoved SMW extension declarations to fix autocompletion... commit | commitdiff | tree | snapshot
2010-10-27 preecejadded prototyping dir for backup and versioning commit | commitdiff | tree | snapshot
2010-10-27 preecejrenamed www to mac_www and added folder for semantic... commit | commitdiff | tree | snapshot
2010-10-22 elserjFix location of find_species.pl commit | commitdiff | tree | snapshot
2010-10-22 elserjFixed gene detection in C.elegans commit | commitdiff | tree | snapshot
2010-10-22 elserjTry that again commit | commitdiff | tree | snapshot
2010-10-22 elserjAnother typo commit | commitdiff | tree | snapshot
2010-10-22 elserjFixed typos commit | commitdiff | tree | snapshot
2010-10-22 elserjFixed location of find_species.pl check commit | commitdiff | tree | snapshot
2010-10-22 elserjAdded new species for Kathryn Bushley commit | commitdiff | tree | snapshot
2010-10-21 preecej- fixed bug that ignored multiple reactome id's in... commit | commitdiff | tree | snapshot
2010-10-19 preecejlaptop svn connectivity test commit | commitdiff | tree | snapshot
2010-10-18 preecejadded comments to test move of svn folder commit | commitdiff | tree | snapshot
2010-10-14 elserjAdded script to take hal tree output and replace 2... commit | commitdiff | tree | snapshot
2010-10-13 preecejAdded system call to sort the results file and remove... commit | commitdiff | tree | snapshot
2010-10-12 preecejAdded code for all mappings, statistical counters,... commit | commitdiff | tree | snapshot
2010-10-11 preecejRemoved unnecessary backups from laptop commit | commitdiff | tree | snapshot
2010-10-11 preecejSwitched from Bio::OntologyIO module to GO::Parser... commit | commitdiff | tree | snapshot
2010-10-09 preecejcopying commit | commitdiff | tree | snapshot
2010-10-09 preecejwrote outline for sub perform_map(); successfully added... commit | commitdiff | tree | snapshot
2010-10-08 preecejhash loads of CAS, LIGAND, RiceCyc commit | commitdiff | tree | snapshot
2010-10-08 preecejadded individual hashes for each input type; attempted... commit | commitdiff | tree | snapshot
2010-10-07 preecejimported Bio::OntologyIO and ran parser test on CHEBI... commit | commitdiff | tree | snapshot
2010-10-07 preecejBasic stub-out of reactome::chebi mapping script. commit | commitdiff | tree | snapshot
2010-10-06 preecejReactome::CHEBI mapping project commit | commitdiff | tree | snapshot
2010-10-02 elserjFix require line to check for location of find_species.pl commit | commitdiff | tree | snapshot
2010-10-02 elserjFix require line to check for location of find_species.pl commit | commitdiff | tree | snapshot
2010-09-27 elserjFixed non-unique gene-id detection. Previous version... commit | commitdiff | tree | snapshot
2010-09-27 elserjAdded detection of non-unique gene-ids commit | commitdiff | tree | snapshot
2010-09-23 elserjFix gene header scope error and remove > symbol from... commit | commitdiff | tree | snapshot
2010-09-23 elserjAdded species db loading script to svn. This script... commit | commitdiff | tree | snapshot
2010-09-23 elserjTook out find_gene lookups as this will now be handled... commit | commitdiff | tree | snapshot
2010-09-23 elserjChange filename split so that errant dashes won't cause... commit | commitdiff | tree | snapshot
2010-09-23 elserjMoved the "clusters" table select statement outside... commit | commitdiff | tree | snapshot
2010-09-23 elserjFix Pediculus gene identification commit | commitdiff | tree | snapshot
2010-09-22 elserjFix whitespace and remove old comments commit | commitdiff | tree | snapshot
2010-09-22 elserjExit script if wrong number of arguments is found commit | commitdiff | tree | snapshot
2010-09-21 elserjRun fasta_header_fix.pl on fasta files before submittin... commit | commitdiff | tree | snapshot
2010-09-21 elserjAdded usage comment if wrong number of arguments commit | commitdiff | tree | snapshot
2010-09-21 elserjModified to take input and output files as arguments... commit | commitdiff | tree | snapshot
2010-09-21 elserjUse subroutine to get species array and cleaned up... commit | commitdiff | tree | snapshot
2010-09-21 elserjAdded subroutine to output all species in an array... commit | commitdiff | tree | snapshot
2010-09-17 elserjFixed Human, Mouse, and Sacc_cerevisiae gene id detection commit | commitdiff | tree | snapshot
2010-09-17 elserjFixes the gene headers in the fasta files so that they... commit | commitdiff | tree | snapshot
2010-09-16 elserjtook out print line in cucumber commit | commitdiff | tree | snapshot
2010-09-16 elserjAdded --new option for creating a new version of the... commit | commitdiff | tree | snapshot
2010-09-14 preecejBackup Location for Mac web contents under /data/www commit | commitdiff | tree | snapshot
2010-09-08 elserjChanged the split for C.elegans since the tab in the... commit | commitdiff | tree | snapshot
2010-09-08 elserjAdded script to loop through and test fasta files via... commit | commitdiff | tree | snapshot
2010-09-07 elserjScript no longer needed since we don't use CSHL cvs... commit | commitdiff | tree | snapshot
2010-09-07 elserjAdded script to find interactions given a list of genes commit | commitdiff | tree | snapshot
2010-09-07 elserjScript to test and verify fasta files are ready for... commit | commitdiff | tree | snapshot
2010-09-03 elserjFixed find_genes subroutine for new versions of the... commit | commitdiff | tree | snapshot
2010-09-03 elserjFixed typo in final output commit | commitdiff | tree | snapshot
2010-09-03 elserjAdded test for genes from find_species.pl subroutines commit | commitdiff | tree | snapshot
2010-09-03 elserjFixed scripts for Mamathas needs, and added better... commit | commitdiff | tree | snapshot
2010-09-03 elserjUpdated the species detection for new species, still... commit | commitdiff | tree | snapshot
2010-09-03 elserjAdded a test script for find_species.pl subroutines commit | commitdiff | tree | snapshot
2010-09-03 elserjFix to skip all isomers, even if higher than .29 commit | commitdiff | tree | snapshot
2010-08-29 preecej# new dir for perl web service and db broker for phenote commit | commitdiff | tree | snapshot
2010-08-25 preecejchanged the string to test the version capabilities commit | commitdiff | tree | snapshot
2010-08-25 elserjAdded a test file for people to use to test commit... commit | commitdiff | tree | snapshot
2010-08-25 preecejadded my personal working directory commit | commitdiff | tree | snapshot
2010-06-02 elserjUpdated scripts commit | commitdiff | tree | snapshot
2010-04-14 elserjSplit find_ortho scripts to do it from the super_clust... commit | commitdiff | tree | snapshot
2010-04-14 elserjProgram to query inparanoid database and retrieve ortho... commit | commitdiff | tree | snapshot
2010-04-05 elserjUpdated version of supercluster to do majority voting commit | commitdiff | tree | snapshot
2010-04-05 elserjadded the script that has the find_species and find_gen... commit | commitdiff | tree | snapshot
2009-11-25 elserjAdded module to interactively connect to database on... commit | commitdiff | tree | snapshot
2009-11-06 elserjupdated versions of flowering_interaction and inparanoi... commit | commitdiff | tree | snapshot
2009-09-30 elserjAdded subroutine to only add the gene or locus id to... commit | commitdiff | tree | snapshot
2009-09-22 elserjFixed the species identification commit | commitdiff | tree | snapshot
2009-09-22 elserjFixed the file so it wasn't a symlink commit | commitdiff | tree | snapshot
2009-09-22 elserjsvn path=/; revision=7 commit | commitdiff | tree | snapshot
2009-09-22 elserjscript to populate the SQL database with data from... commit | commitdiff | tree | snapshot
2009-08-31 elserjAdded scripts for running inparanoid and copying the... commit | commitdiff | tree | snapshot
2009-08-14 elserjtesting commit | commitdiff | tree | snapshot
2009-08-14 testusermade test change commit | commitdiff | tree | snapshot
2009-08-14 elserjAdded version to tree script commit | commitdiff | tree | snapshot
2009-08-14 elserjJustin's initial import of his scripts commit | commitdiff | tree | snapshot
Jaiswal Lab