| 2015-12-31 |
meiera | moved "isolated_from_germplasm(Nipponbare)" to column... |
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| 2015-12-31 |
cooperl | Changed aspect code from S to A |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Fixed typo on line #91 |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Fix gaf-version header |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Changed object type "Protein" to "protein" |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Removed spaces after object type "gene" |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Change expressed_under relation to in_presence_of |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Change taxon id to one that works |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Fixed 'stock" to "germplasm" |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Fixed Ethan Johnson! assigned by column. |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Removed NA from Col8 |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Fixed Gene- should be "gene" |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Fixed Aspect code |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Commented out line with missing TO term |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Add gaf-version header since these files are gaf 2.0 |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Remove version header as this isn't actually a gaf... |
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| 2015-12-31 |
meiera | added "GRIN" to column 6 of lentil assoc file. |
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| 2015-12-31 |
elserj | Added PMID to column 6 |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Fix missing columns |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | -commented out lines with missing data. |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
meiera | updated headers of gaf files to include "!gaf-version... |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | -commented out lines with missing data. |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
cooperl | Commented out lines with missing data. |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
meiera | Added lentil germplasm annotation file created from... |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Fix extra bracket in column 16 |
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| 2015-12-31 |
cooperl | - Removed test file Test_PPPP_TO/TO_IMP_gene_O.sativa... |
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| 2015-12-31 |
elserj | Fix broken relations in column 16 and missing columns |
commit | commitdiff | tree | snapshot |
| 2015-12-31 |
elserj | Add extra tabs to last line that were missing |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Add tab to get 17 columns |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Changed taxon id to one that works for Physcomitrella |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Add gaf-version header and fix number of columns |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
meiera | Changed aspect column to "T" from "TO". Should be... |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Add gaf version header |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Fix all loading errors, which included adding version... |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
meiera | updated rice germplasm annotation file, removed individ... |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
meiera | updated new annotation files, added them to the concate... |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Remove unnecessary tabs from last column |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Fix loding errors in AmiGO2 |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Remove extra columns from header |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Add "taxon:" to taxon column |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Remove gaf-version tag from header, file isn't actually 2.0 |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Change Physcomitrella taxon id to one that works |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Messed up adding the "taxon:", it shouldn't have been... |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Removed extra column 18, added gaf-version header and... |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
elserj | Added gaf-version header line to make warnings go away... |
commit | commitdiff | tree | snapshot |
| 2015-12-30 |
meiera | Removed individual annotation files, replaced them... |
commit | commitdiff | tree | snapshot |
| 2015-12-29 |
cooperl | Removed lines in TO_IMP_gene_O.sativa.assoc and saved... |
commit | commitdiff | tree | snapshot |
| 2015-12-29 |
cooperl | Adding cassava data files for reference |
commit | commitdiff | tree | snapshot |
| 2015-12-29 |
cooperl | Adding cassava germaplsm annotations from Genesys |
commit | commitdiff | tree | snapshot |
| 2015-12-29 |
cooperl | Fixed file names for TO_PPPP files |
commit | commitdiff | tree | snapshot |
| 2015-12-29 |
cooperl | changed aspect to T from branch identifiers in PPPP... |
commit | commitdiff | tree | snapshot |
| 2015-12-29 |
cooperl | Added a couple missing TO annotations. |
commit | commitdiff | tree | snapshot |
| 2015-12-28 |
meiera | added test files to test column 9 (Aspect). Added... |
commit | commitdiff | tree | snapshot |
| 2015-12-28 |
meiera | Added blast annotation file back |
commit | commitdiff | tree | snapshot |
| 2015-12-28 |
meiera | removed blast annotation file testing the use of column8. |
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| 2015-12-17 |
cooperl | Adding test folder for cassava annotations |
commit | commitdiff | tree | snapshot |
| 2015-12-17 |
meiera | changed from_country annotation to column 8, and left... |
commit | commitdiff | tree | snapshot |
| 2015-12-14 |
meiera | Removed '\n' from protein_trait_annotation.tsv |
commit | commitdiff | tree | snapshot |
| 2015-12-14 |
meiera | Fixed line errors in files. Testing column 8 in blast2... |
commit | commitdiff | tree | snapshot |
| 2015-12-12 |
meiera | Files should no longer be empty!!! |
commit | commitdiff | tree | snapshot |
| 2015-12-11 |
meiera | this time I actually added the gaf files. |
commit | commitdiff | tree | snapshot |
| 2015-12-11 |
meiera | Removed old test_rice_blast_annotation.tsv, and replace... |
commit | commitdiff | tree | snapshot |
| 2015-11-25 |
meiera | Added a test_germplasm folder to store test annotation... |
commit | commitdiff | tree | snapshot |
| 2015-11-13 |
elserj | Replace GR_tax ids with corresponding NCBI ones |
commit | commitdiff | tree | snapshot |
| 2015-10-14 |
elserj | Remove all .txt files as they have been superceded... |
commit | commitdiff | tree | snapshot |
| 2015-10-09 |
elserj | Updated zip file to have all association files in relea... |
commit | commitdiff | tree | snapshot |
| 2015-10-05 |
elserj | Replace references to "Ethan Johnson" and "Brian_Atkins... |
commit | commitdiff | tree | snapshot |
| 2015-10-05 |
elserj | Change association to alt_id PO:0007617 to PO:0007616... |
commit | commitdiff | tree | snapshot |
| 2015-10-05 |
elserj | Revert back to non-empty revision. Automatic commit... |
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| 2015-10-03 |
elserj | Fix typo: GRR should have been GR |
commit | commitdiff | tree | snapshot |
| 2015-10-01 |
meiera | changed line 1476 in po_anatomy_stock_arabidopsis_nasc... |
commit | commitdiff | tree | snapshot |
| 2015-09-29 |
elserj | Remove space in column 16 |
commit | commitdiff | tree | snapshot |
| 2015-09-29 |
elserj | Fix missing end parantheses in column 16. Was causing... |
commit | commitdiff | tree | snapshot |
| 2015-09-29 |
elserj | Fix extra pipe symbols in column 16 that were causing... |
commit | commitdiff | tree | snapshot |
| 2015-09-29 |
elserj | Fix missing parantheses in column 16 on some lines |
commit | commitdiff | tree | snapshot |
| 2015-09-28 |
meiera | revised line 441 to fix issue with blank col_7 |
commit | commitdiff | tree | snapshot |
| 2015-09-28 |
elserj | Removed 2 blank lines |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
meiera | changed names of PO_* to be lowercase po_*. keeps the... |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
meiera | removed 11 exact duplicate rows from PO_growth_gene_mod... |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
elserj | Move soy qtl file out of testing |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
cooperl | Removing empty test folders |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
cooperl | Removing empty test folder |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
meiera | Duplicate removal of maize association files using... |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
cooperl | Added eight lines that were in the PO file and referred... |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
cooperl | Removed lines referring to PO:0020008, which is the... |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
elserj | Move files out of test_leaf_dev and test_PPPP_PO folder... |
commit | commitdiff | tree | snapshot |
| 2015-09-25 |
meiera | po_anatomy_gene_zea_MaizeGDB.assoc file was loaded... |
commit | commitdiff | tree | snapshot |
| 2015-09-18 |
elserj | Changed column 8 to have MaizeGDB: in the from part... |
commit | commitdiff | tree | snapshot |
| 2015-09-18 |
elserj | Fix taxon id column to use NCBI ids rather than gramene... |
commit | commitdiff | tree | snapshot |
| 2015-09-16 |
meiera | revised the po_anatomy_stock_zea_MaizeGDB.assoc to... |
commit | commitdiff | tree | snapshot |
| 2015-09-16 |
meiera | revised column 1 of po_anatomy_stock_zea_MaizeGDB.assoc... |
commit | commitdiff | tree | snapshot |
| 2015-09-12 |
meiera | Removed duplicate lines from TO_ontology_IMP_gene_Z... |
commit | commitdiff | tree | snapshot |
| 2015-09-12 |
meiera | Removed duplicate lines from TO_ontology_IMP_gene_M... |
commit | commitdiff | tree | snapshot |
| 2015-09-12 |
meiera | removed duplicate lines from GO_ontology_IMP_gene_M... |
commit | commitdiff | tree | snapshot |
| 2015-09-12 |
meiera | Removed duplicated lines from GO_ontology_IMP_gene_S... |
commit | commitdiff | tree | snapshot |
| 2015-09-11 |
meiera | removed duplicated lines from GO_ontology_IMP_gene_O... |
commit | commitdiff | tree | snapshot |
| 2015-09-11 |
cooperl | Removed test_phenos folder and the go_gene_oryza_phenos... |
commit | commitdiff | tree | snapshot |
| 2015-09-11 |
meiera | renamed all the association files in the Test_PPPP_TO... |
commit | commitdiff | tree | snapshot |
| 2015-09-11 |
meiera | Renamed all association files in Test_PPPP_GO to be... |
commit | commitdiff | tree | snapshot |
| 2015-09-11 |
cooperl | renamed the test-maizegdb-2015 folder to test-maizegdb |
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