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associations/.git
2016-01-03 cooperlModified Cassava Genesys assoc file- moved BMSid values...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjAdded some of the gaf files created by projecting ortho...
2016-01-01 elserjFix missing tab in last column
2015-12-31 cooperlfinal edits to map CO-TO
2015-12-31 cooperlRemoved lines to CO_334:0000010- # of plants harvested...
2015-12-31 cooperlAdding cassava trait file with TO annotations
2015-12-31 meieramoved "isolated_from_germplasm" relation from column...
2015-12-31 meieraremoved empty test folders
2015-12-31 meierachanged names to include database "GRIN"
2015-12-31 meieraadded rice and lentil germplasm assoc files to main...
2015-12-31 meieramoved rice and lentil germplasm assoc files out of...
2015-12-31 cooperlMoved the TO_IMP files from PPPP to main folder
2015-12-31 cooperlChanged Assigned by from POC:Ethan_Johnson to Ethan...
2015-12-31 meieraadded the !gaf-version: 2.0 first line back.≈
2015-12-31 meieramoved "isolated_from_germplasm(Nipponbare)" to column...
2015-12-31 cooperlChanged aspect code from S to A
2015-12-31 cooperlFixed typo on line #91
2015-12-31 elserjFix gaf-version header
2015-12-31 cooperlChanged object type "Protein" to "protein"
2015-12-31 cooperlRemoved spaces after object type "gene"
2015-12-31 elserjChange expressed_under relation to in_presence_of
2015-12-31 elserjChange taxon id to one that works
2015-12-31 cooperlFixed 'stock" to "germplasm"
2015-12-31 cooperlFixed Ethan Johnson! assigned by column.
2015-12-31 cooperlRemoved NA from Col8
2015-12-31 cooperlFixed Gene- should be "gene"
2015-12-31 cooperlFixed Aspect code
2015-12-31 cooperlCommented out line with missing TO term
2015-12-31 elserjAdd gaf-version header since these files are gaf 2.0
2015-12-31 elserjRemove version header as this isn't actually a gaf...
2015-12-31 meieraadded "GRIN" to column 6 of lentil assoc file.
2015-12-31 elserjAdded PMID to column 6
2015-12-31 elserjFix missing columns
2015-12-31 cooperl-commented out lines with missing data.
2015-12-31 meieraupdated headers of gaf files to include "!gaf-version...
2015-12-31 cooperl-commented out lines with missing data.
2015-12-31 cooperlCommented out lines with missing data.
2015-12-31 meieraAdded lentil germplasm annotation file created from...
2015-12-31 elserjFix extra bracket in column 16
2015-12-31 cooperl- Removed test file Test_PPPP_TO/TO_IMP_gene_O.sativa...
2015-12-31 elserjFix broken relations in column 16 and missing columns
2015-12-31 elserjAdd extra tabs to last line that were missing
2015-12-30 elserjAdd tab to get 17 columns
2015-12-30 elserjChanged taxon id to one that works for Physcomitrella
2015-12-30 elserjAdd gaf-version header and fix number of columns
2015-12-30 meieraChanged aspect column to "T" from "TO". Should be...
2015-12-30 elserjAdd gaf version header
2015-12-30 elserjFix all loading errors, which included adding version...
2015-12-30 meieraupdated rice germplasm annotation file, removed individ...
2015-12-30 meieraupdated new annotation files, added them to the concate...
2015-12-30 elserjRemove unnecessary tabs from last column
2015-12-30 elserjFix loding errors in AmiGO2
2015-12-30 elserjRemove extra columns from header
2015-12-30 elserjAdd "taxon:" to taxon column
2015-12-30 elserjRemove gaf-version tag from header, file isn't actually 2.0
2015-12-30 elserjChange Physcomitrella taxon id to one that works
2015-12-30 elserjMessed up adding the "taxon:", it shouldn't have been...
2015-12-30 elserjRemoved extra column 18, added gaf-version header and...
2015-12-30 elserjAdded gaf-version header line to make warnings go away...
2015-12-30 meieraRemoved individual annotation files, replaced them...
2015-12-29 cooperlRemoved lines in TO_IMP_gene_O.sativa.assoc and saved...
2015-12-29 cooperlAdding cassava data files for reference
2015-12-29 cooperlAdding cassava germaplsm annotations from Genesys
2015-12-29 cooperlFixed file names for TO_PPPP files
2015-12-29 cooperlchanged aspect to T from branch identifiers in PPPP...
2015-12-29 cooperlAdded a couple missing TO annotations.
2015-12-28 meieraadded test files to test column 9 (Aspect). Added...
2015-12-28 meieraAdded blast annotation file back
2015-12-28 meieraremoved blast annotation file testing the use of column8.
2015-12-17 cooperlAdding test folder for cassava annotations
2015-12-17 meierachanged from_country annotation to column 8, and left...
2015-12-14 meieraRemoved '\n' from protein_trait_annotation.tsv
2015-12-14 meieraFixed line errors in files. Testing column 8 in blast2...
2015-12-12 meieraFiles should no longer be empty!!!
2015-12-11 meierathis time I actually added the gaf files.
2015-12-11 meieraRemoved old test_rice_blast_annotation.tsv, and replace...
2015-11-25 meieraAdded a test_germplasm folder to store test annotation...
2015-11-13 elserjReplace GR_tax ids with corresponding NCBI ones
2015-10-14 elserjRemove all .txt files as they have been superceded...
2015-10-09 elserjUpdated zip file to have all association files in relea...
2015-10-05 elserjReplace references to "Ethan Johnson" and "Brian_Atkins...
2015-10-05 elserjChange association to alt_id PO:0007617 to PO:0007616...
2015-10-05 elserjRevert back to non-empty revision. Automatic commit...
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