Hello!

To see the file structure, click on "tree".

Note that updates take place every 10 minutes, commits may not be seen immediately.
associations/.git
2024-09-09 cooperlAdding rest of Cluster 1 annotations
2024-09-09 cooperlAdding additional annotations
2024-09-07 cooperlAdding additional lines
2024-09-07 cooperlAdding more annotation lines
2024-09-07 cooperlFixed 'assigned by'
2024-09-06 cooperlAdded missing line ending
2024-09-06 cooperlAdding new file of annotations from Zhng et al, 2021.
2024-08-14 elserjUpdate Sorghum QTLs
2024-05-09 cooperlFixed a couple more NDF QTLs
2024-05-09 cooperlUpdated mappings to new NDF term TO:0001148
2024-04-24 elserjUpdate TAIR annotations to latest. Downloaded 12/3...
2024-03-16 cooperlFixed genes with wrong symbol, removed duplicates
2024-03-15 cooperlFixing gene names
2024-03-15 cooperlFixed DOIs
2024-03-14 cooperlFixing curator: col 15
2024-03-13 elserjRemove extra tab
2024-03-13 cooperlAdding Gramene gene annotations
2024-03-07 cooperlAdding folder for PSO annotations
2024-02-02 elserjMissing "!" in header line
2024-01-03 elserjChange NCBITaxon: to taxon: to be consistent with other...
2023-12-19 cooperlUpdating mappings to fungal disease QTLs
2023-11-30 cooperlMoved Phytophora QTLs to new Oomycete term TO:0001144
2023-11-14 cooperlUpdated mappings to antioxidant QTLs with new antioxida...
2023-10-26 elserjRemove duplicate lines
2023-10-04 cooperlUpdating files formats to gaf 2.1
2023-10-04 cooperlUpdated file formats to gaf 2.1
2023-09-01 cooperlMoving a couple more files into test folder
2023-09-01 cooperlmoving test file
2023-08-22 cooperlAdding another test file to the folder
2023-08-22 cooperlMoving the SoyBase test file into new test folder
2023-08-22 cooperlCreating folde for the SoyBase test files
2023-07-20 elserjReplace new batch of obsolete GO terms
2023-07-19 elserjAdd OsXXgYYYYY synonyms
2023-07-05 cooperlUpdated mappings to 21 QTL for Pubescence density from...
2023-06-14 elserjFix Genesys db_id and dbxref to link out properly
2023-06-08 cooperlChanged mapping to leaflet Chl content to new TO term...
2023-05-26 elserjFix wrong aspect. GO terms were changed because of...
2023-05-25 elserjFix extra tabs
2023-05-24 cooperlFixed some the references to be consistent with the...
2023-05-24 elserjNew batch of fixed obsoletes
2023-05-23 cooperlFixed mappings to grain phosphorus content and updated...
2023-05-19 elserjAdd missing header line
2023-05-19 cooperlAdding individual files for the Gramene TO QTL annotations
2023-05-19 cooperlemoving this file, since I split into individual files.
2023-05-19 cooperlSplit file into separate taxa to match peco files
2023-05-19 elserjFix new batch of obsolete terms. If term had a replacem...
2023-03-30 elserjFix spelling of Arabidopsis in filename
2023-03-30 elserjFix extra space in with/from column
2023-03-30 elserjFix with/from column (8) for MaizeGDB files
2023-03-30 elserjAdd Cornus florida (dogwood) iprscan and ortholog files
2023-03-30 elserjUpdated GO ortholog assoc files based on new file from...
2023-03-30 elserjUpdated GO Arabidopsis annotations from TAIR
2023-03-30 elserjFix missing aspect for some terms
2023-03-30 elserjFix all obsolete terms. If term had a single replacemen...
2023-03-29 cooperlFixing object names
2023-03-27 cooperlReplaced obsolete GO:0010260 with GO:0090693
2023-03-27 cooperlFixed a few references
2023-03-27 elserjFix remaining isses in Sorghum qtl files. Missing taxon...
2023-03-27 elserjAdd missing tabs to make it gaf 2.0 compliant
2023-03-27 elserjReplace NCBITaxonomy with taxon for consistency
2023-03-27 elserjSwitch to unix format with dos2unix
2023-03-27 elserjRemove spaces from reference column
2023-03-27 elserjConvert to unix format with dos2unix
2023-03-27 elserjSwitch files to unix format with dos2unix
2023-03-27 cooperlfixed missing tab
2023-03-27 cooperlFixing missing fields
2023-03-27 cooperlFixed missing fields
2023-03-26 cooperlRemoved extra column
2023-03-25 cooperlFixing refernces and synonyms
2023-03-25 cooperlChanged from seed to grain, fixed date and curator...
2023-03-23 cooperlFixing references
2023-03-23 cooperlFixed date
2023-03-23 cooperlUpdating PECO Zea_Gramene annotations
2023-03-22 cooperl Fixing missing fields
2023-03-22 cooperlUpdating and fixing Gramene QTL files for Sorghum and...
2023-03-20 cooperlUpdating the Gramene Oyza PECO annotations to be consis...
2023-03-18 cooperlFixing some of the links to GrainGenes
2023-03-18 cooperlUpdating the QTl symbols and synonyms
2023-03-18 cooperlUpdating annotations and refs
2023-03-17 cooperlCahnges annotations on Barley fusarium head blight...
2023-03-16 cooperlTesting Hordeum QTL assoc file
2023-03-16 cooperlUpdating Gramene PECO QTL associations-Zizania
2023-03-16 cooperlUpdating Gramene PECO QTL associations-Avena
2023-03-10 cooperlAdded missing eol character
2023-03-10 cooperlFixed object IDS, moved trait symbols to synonym field.
2023-03-10 cooperlAdding back missing column
2023-03-09 cooperlAdded missing tabs for column 16, 17
2023-03-09 cooperlFixed missing end of line character
2023-03-09 cooperlFixed synonyms and swapped col 2+3
2023-03-09 cooperlFixed columns, removed extra Object ID column
2023-02-28 cooperlFixed missing tab columns
2023-02-28 cooperlRemoved extra space
2023-02-24 cooperlFixed mappings on pod weight and pods per node QTLs
2023-02-17 cooperlFixed amppings to pod number QTLs- TO:0001125 pod numbe...
2023-02-10 cooperlReplaced missing line
2023-02-10 cooperlRemoved extra lines
2023-02-10 cooperlCombined lines with multiple references
2023-02-10 cooperlFixed the "assigned by " field
2023-02-09 cooperlChanged annotatios on root P to new root P term TO...
2023-02-09 cooperlAdded my name, along with Rex's for the annotations
next